RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SPANXB1Q9NS25 103 aaPredicted RBP3.6□□□□□ -1.83
SCAF11-213ENST00000550629 HIGD1BQ9P298 99 aa3.6□□□□□ -1.83
SCAF11-213ENST00000550629 TP73-AS1Q9UF72 201 aa3.6□□□□□ -1.83
SCAF11-213ENST00000550629 A0A0U1RRA0 63 aa3.59□□□□□ -1.83
SCAF11-213ENST00000550629 NDUFC2O95298 119 aa3.59□□□□□ -1.83
SCAF11-213ENST00000550629 LBHQ53QV2 105 aaPredicted RBP3.59□□□□□ -1.83
SCAF11-213ENST00000550629 LINC00308Q8TCZ7 52 aa3.59□□□□□ -1.83
SCAF11-213ENST00000550629 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
SCAF11-213ENST00000550629 UQCR10Q9UDW1 63 aa3.59□□□□□ -1.83
SCAF11-213ENST00000550629 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
SCAF11-213ENST00000550629 DNAH11Q96DT5 4516 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 FAM168BA1KXE4 195 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 M0QXV9 152 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 VPREB1P12018 145 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 XGP55808 180 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCAF11-213ENST00000550629 TAL2Q16559 108 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 C2orf91Q6ZV80 131 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 LINC00518Q8N0U6 118 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 DAND5Q8N907 189 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 NKAPP1Q8N9T2 125 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 C12orf57Q99622 126 aa3.58□□□□□ -1.84
SCAF11-213ENST00000550629 IGLV9-49A0A0B4J1Y8 123 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 TSTD3H0UI37 97 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 M0R378 163 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 SOSTDC1Q6X4U4 206 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 FAM19A5Q7Z5A7 132 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-213ENST00000550629 MRPL55Q7Z7F7 128 aaKnown RBP3.57□□□□□ -1.84
SCAF11-213ENST00000550629 C7orf33Q8WU49 177 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 HIST1H4GQ99525 98 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 CBY1Q9Y3M2 126 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 C22orf24Q9Y442 160 aa3.57□□□□□ -1.84
SCAF11-213ENST00000550629 MUSTN1Q8IVN3 82 aa3.56□□□□□ -1.84
SCAF11-213ENST00000550629 Q8NDZ9 215 aa3.56□□□□□ -1.84
SCAF11-213ENST00000550629 IGLV6-57P01721 117 aa3.55□□□□□ -1.84
SCAF11-213ENST00000550629 HNRNPA3P51991 378 aaKnown RBP3.55□□□□□ -1.84
SCAF11-213ENST00000550629 HSD52Q0P140 79 aa3.55□□□□□ -1.84
SCAF11-213ENST00000550629 IGLV1-50A0A075B6I6 118 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 IGKV2-28A0A075B6P5 120 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 IGKV2D-28P01615 120 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 NPC2P61916 151 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 UBE2BP63146 152 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 PRR3P79522 188 aaKnown RBP3.54□□□□□ -1.84
SCAF11-213ENST00000550629 PHF5AQ7RTV0 110 aaKnown RBP3.54□□□□□ -1.84
SCAF11-213ENST00000550629 CEND1Q8N111 149 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 TMEM126AQ9H061 195 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 PRO1933Q9H354 126 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 KCNQ1DNQ9H478 68 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
SCAF11-213ENST00000550629 DYNC1H1Q14204 4646 aaKnown RBP3.53□□□□□ -1.84
SCAF11-213ENST00000550629 A4D1N5 150 aa3.53□□□□□ -1.84
SCAF11-213ENST00000550629 NCR3O14931 201 aa3.53□□□□□ -1.84
SCAF11-213ENST00000550629 DDTP30046 118 aa3.53□□□□□ -1.84
SCAF11-213ENST00000550629 HAMPP81172 84 aa3.53□□□□□ -1.84
SCAF11-213ENST00000550629 S100A7L2Q5SY68 101 aa3.53□□□□□ -1.84
SCAF11-213ENST00000550629 SRRM2Q9UQ35 2752 aaKnown RBP3.53□□□□□ -1.84
SCAF11-213ENST00000550629 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
SCAF11-213ENST00000550629 KIAA1109Q2LD37 5005 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 A0A0B4J2C4 111 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 TRBV10-3A0A0K0K1G6 114 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 RPL37AP8A6NKH3 93 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 H0Y9J4 135 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 M0R143 59 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 BCE1O60756 84 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 RPL37AP61513 92 aaKnown RBP3.52□□□□□ -1.85
SCAF11-213ENST00000550629 REG3GQ6UW15 175 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 LINC00337Q8N6G1 96 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 PSORS1C2Q9UIG4 136 aa3.52□□□□□ -1.85
SCAF11-213ENST00000550629 TRAV23DV6A0A075B6W5 121 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 TRBV7-6A0A0J9YX20 115 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 A0A1B0GWB2 263 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 A6NDN8 102 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 SMR3BP02814 79 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-213ENST00000550629 SPRR1AP35321 89 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 KRTAP11-1Q8IUC1 163 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 OR13C6PQ8NH95 151 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 RYR1P21817 5038 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 LRP1BQ9NZR2 4599 aa3.51□□□□□ -1.85
SCAF11-213ENST00000550629 KRTAP4-16G5E9R7 235 aaPredicted RBP3.5□□□□□ -1.85
SCAF11-213ENST00000550629 ZNF73O43830 326 aaPredicted RBP3.5□□□□□ -1.85
SCAF11-213ENST00000550629 IGLV7-43P04211 117 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 RPL28P46779 137 aaKnown RBP3.5□□□□□ -1.85
SCAF11-213ENST00000550629 FXYD2P54710 66 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 DSCR10P59022 87 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 KRTAP10-4P60372 401 aaPredicted RBP3.5□□□□□ -1.85
SCAF11-213ENST00000550629 CTAG1AP78358 180 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 C1orf137Q5JT78 98 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 BVES-AS1Q5T3Y7 98 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 Q5VSD8 79 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 RAB37Q96AX2 223 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 PRO1854Q9UHT4 67 aa3.5□□□□□ -1.85
SCAF11-213ENST00000550629 ETDCA0A1B0GVM5 59 aa3.49□□□□□ -1.85
SCAF11-213ENST00000550629 RPL13AP40429 203 aaKnown RBP3.49□□□□□ -1.85
SCAF11-213ENST00000550629 HINT1P49773 126 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-213ENST00000550629 KRTAP13-1Q8IUC0 172 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms