RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 NDUFC2O95298 119 aa8.4□□□□□ -1.06
RAB5C-205ENST00000550013 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
RAB5C-205ENST00000550013 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
RAB5C-205ENST00000550013 ZNF73O43830 326 aaPredicted RBP8.39□□□□□ -1.07
RAB5C-205ENST00000550013 NPC2P61916 151 aa8.39□□□□□ -1.07
RAB5C-205ENST00000550013 SOSTDC1Q6X4U4 206 aa8.39□□□□□ -1.07
RAB5C-205ENST00000550013 SNAPINO95295 136 aa8.38□□□□□ -1.07
RAB5C-205ENST00000550013 HRCT1Q6UXD1 115 aa8.38□□□□□ -1.07
RAB5C-205ENST00000550013 PLNP26678 52 aa8.37□□□□□ -1.07
RAB5C-205ENST00000550013 PMCHL2Q9BQD1 86 aa8.37□□□□□ -1.07
RAB5C-205ENST00000550013 LEPROTL1O95214 131 aa8.36□□□□□ -1.07
RAB5C-205ENST00000550013 LGALS3P17931 250 aaKnown RBP8.36□□□□□ -1.07
RAB5C-205ENST00000550013 NMUP48645 174 aa8.36□□□□□ -1.07
RAB5C-205ENST00000550013 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
RAB5C-205ENST00000550013 SVBPQ8N300 66 aa8.36□□□□□ -1.07
RAB5C-205ENST00000550013 DPM2O94777 84 aa8.35□□□□□ -1.07
RAB5C-205ENST00000550013 LINC00310P59036 64 aa8.35□□□□□ -1.07
RAB5C-205ENST00000550013 HERVK_113P61574 105 aa8.35□□□□□ -1.07
RAB5C-205ENST00000550013 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
RAB5C-205ENST00000550013 C5orf52A6NGY3 159 aa8.34□□□□□ -1.07
RAB5C-205ENST00000550013 CFC1BP0CG36 223 aa8.34□□□□□ -1.07
RAB5C-205ENST00000550013 SLC7A5P1Q8MH63 180 aa8.34□□□□□ -1.07
RAB5C-205ENST00000550013 A0A0J9YXY3 114 aa8.33□□□□□ -1.08
RAB5C-205ENST00000550013 SERF1AO75920 110 aa8.33□□□□□ -1.08
RAB5C-205ENST00000550013 SPRR1BP22528 89 aa8.33□□□□□ -1.08
RAB5C-205ENST00000550013 IGKCP01834 107 aa8.32□□□□□ -1.08
RAB5C-205ENST00000550013 FABP4P15090 132 aa8.32□□□□□ -1.08
RAB5C-205ENST00000550013 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
RAB5C-205ENST00000550013 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
RAB5C-205ENST00000550013 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
RAB5C-205ENST00000550013 TRGC2P03986 189 aa8.29□□□□□ -1.08
RAB5C-205ENST00000550013 SLC25A34Q6PIV7 304 aa8.29□□□□□ -1.08
RAB5C-205ENST00000550013 OR13C6PQ8NH95 151 aa8.29□□□□□ -1.08
RAB5C-205ENST00000550013 LAMTOR3Q9UHA4 124 aa8.29□□□□□ -1.08
RAB5C-205ENST00000550013 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
RAB5C-205ENST00000550013 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
RAB5C-205ENST00000550013 CBY1Q9Y3M2 126 aa8.28□□□□□ -1.08
RAB5C-205ENST00000550013 FLGP20930 4061 aaPredicted RBP8.26□□□□□ -1.09
RAB5C-205ENST00000550013 E9PLD3 99 aa8.26□□□□□ -1.09
RAB5C-205ENST00000550013 H7C2G1 150 aa8.26□□□□□ -1.09
RAB5C-205ENST00000550013 Q1RN00 199 aa8.26□□□□□ -1.09
RAB5C-205ENST00000550013 LINC00308Q8TCZ7 52 aa8.26□□□□□ -1.09
RAB5C-205ENST00000550013 LITAFQ99732 161 aa8.26□□□□□ -1.09
RAB5C-205ENST00000550013 SPANXCQ9NY87 97 aa8.26□□□□□ -1.09
RAB5C-205ENST00000550013 DEFB105AQ8NG35 78 aa8.25□□□□□ -1.09
RAB5C-205ENST00000550013 CD164Q04900 197 aa8.24□□□□□ -1.09
RAB5C-205ENST00000550013 COX7BP24311 80 aa8.23□□□□□ -1.09
RAB5C-205ENST00000550013 ELOF1P60002 83 aaKnown RBP8.23□□□□□ -1.09
RAB5C-205ENST00000550013 TAL2Q16559 108 aa8.23□□□□□ -1.09
RAB5C-205ENST00000550013 SPANXDQ9BXN6 97 aa8.23□□□□□ -1.09
RAB5C-205ENST00000550013 PRO1933Q9H354 126 aa8.23□□□□□ -1.09
RAB5C-205ENST00000550013 M0R2T5 61 aa8.22□□□□□ -1.09
RAB5C-205ENST00000550013 C6orf99Q4VX62 202 aa8.22□□□□□ -1.09
RAB5C-205ENST00000550013 C1orf195Q5TG92 126 aa8.22□□□□□ -1.09
RAB5C-205ENST00000550013 A0A0G2JQZ4 141 aa8.21□□□□□ -1.1
RAB5C-205ENST00000550013 TIMM17BO60830 172 aa8.2□□□□□ -1.1
RAB5C-205ENST00000550013 RPL37P61927 97 aaKnown RBP8.2□□□□□ -1.1
RAB5C-205ENST00000550013 TEX49A0A1B0GTD5 131 aa8.19□□□□□ -1.1
RAB5C-205ENST00000550013 Q5XG85 94 aa8.19□□□□□ -1.1
RAB5C-205ENST00000550013 COX6B2Q6YFQ2 88 aa8.19□□□□□ -1.1
RAB5C-205ENST00000550013 SMIM29Q86T20 159 aa8.19□□□□□ -1.1
RAB5C-205ENST00000550013 TTTY13Q9BZ97 58 aa8.18□□□□□ -1.1
RAB5C-205ENST00000550013 AKR1D1P51857 326 aa8.17□□□□□ -1.1
RAB5C-205ENST00000550013 ZNF815PA8K554 130 aa8.16□□□□□ -1.1
RAB5C-205ENST00000550013 SYS1-DBNDD2H3BUS1 97 aa8.15□□□□□ -1.1
RAB5C-205ENST00000550013 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
RAB5C-205ENST00000550013 IGLV5-48A0A075B6I7 105 aa8.13□□□□□ -1.11
RAB5C-205ENST00000550013 TRBV7-6A0A0J9YX20 115 aa8.13□□□□□ -1.11
RAB5C-205ENST00000550013 A0A1B0GWB2 263 aa8.11□□□□□ -1.11
RAB5C-205ENST00000550013 COLCA2A8K830 154 aa8.11□□□□□ -1.11
RAB5C-205ENST00000550013 LINC01545Q5VT33 79 aa8.11□□□□□ -1.11
RAB5C-205ENST00000550013 A6NDN8 102 aa8.08□□□□□ -1.12
RAB5C-205ENST00000550013 TCL1BO95988 128 aa8.07□□□□□ -1.12
RAB5C-205ENST00000550013 PET117Q6UWS5 81 aa8.07□□□□□ -1.12
RAB5C-205ENST00000550013 TMA7Q9Y2S6 64 aaKnown RBP8.07□□□□□ -1.12
RAB5C-205ENST00000550013 SCGB1D4Q6XE38 83 aa8.05□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BKO60814 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BJP06899 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BOP23527 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BBP33778 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BDP58876 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BCP62807 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST2H2BEQ16778 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.04□□□□□ -1.12
RAB5C-205ENST00000550013 Q6Q795 121 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BHQ93079 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BNQ99877 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 HIST1H2BMQ99879 126 aa8.04□□□□□ -1.12
RAB5C-205ENST00000550013 C3orf79P0CE67 100 aa8.03□□□□□ -1.12
RAB5C-205ENST00000550013 A4D1N5 150 aa8.02□□□□□ -1.13
RAB5C-205ENST00000550013 IFITM1P13164 125 aa8.02□□□□□ -1.13
RAB5C-205ENST00000550013 MUSTN1Q8IVN3 82 aa8.02□□□□□ -1.13
RAB5C-205ENST00000550013 SMIM11BQ8TCY0 68 aa8.02□□□□□ -1.13
RAB5C-205ENST00000550013 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
RAB5C-205ENST00000550013 PCP2Q8IVA1 136 aa8.01□□□□□ -1.13
RAB5C-205ENST00000550013 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
RAB5C-205ENST00000550013 NHP2Q9NX24 153 aaKnown RBP8.01□□□□□ -1.13
RAB5C-205ENST00000550013 F8WEM9 126 aa8□□□□□ -1.13
RAB5C-205ENST00000550013 USH2AO75445 5202 aa7.99□□□□□ -1.13
RAB5C-205ENST00000550013 LOC105371267A0A1B0GV96 52 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms