RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 J3QQQ9 107 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 DPM2O94777 84 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 PLNP26678 52 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 SPRR1AP35321 89 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 GAGE2AQ6NT46 116 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 SLC7A5P1Q8MH63 180 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 LINC00337Q8N6G1 96 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 Q8NBF4 154 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 HSPB8Q9UJY1 196 aa3.84□□□□□ -1.79
SCAF11-211ENST00000547950 KRTAP4-16G5E9R7 235 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-211ENST00000547950 IGKCP01834 107 aa3.83□□□□□ -1.8
SCAF11-211ENST00000547950 LGALS3P17931 250 aaKnown RBP3.83□□□□□ -1.8
SCAF11-211ENST00000547950 DDTP30046 118 aa3.83□□□□□ -1.8
SCAF11-211ENST00000547950 HERVK_113P61574 105 aa3.83□□□□□ -1.8
SCAF11-211ENST00000547950 CTAG1AP78358 180 aa3.83□□□□□ -1.8
SCAF11-211ENST00000547950 MIEN1Q9BRT3 115 aa3.83□□□□□ -1.8
SCAF11-211ENST00000547950 IGLV9-49A0A0B4J1Y8 123 aa3.82□□□□□ -1.8
SCAF11-211ENST00000547950 B5MCH6 92 aa3.82□□□□□ -1.8
SCAF11-211ENST00000547950 ERC2-IT1O76042 136 aa3.82□□□□□ -1.8
SCAF11-211ENST00000547950 NPC2P61916 151 aa3.82□□□□□ -1.8
SCAF11-211ENST00000547950 TPRXLQ17RH7 258 aa3.82□□□□□ -1.8
SCAF11-211ENST00000547950 S100A7L2Q5SY68 101 aa3.82□□□□□ -1.8
SCAF11-211ENST00000547950 LOC107984156A0A0G2JMH3 177 aa3.81□□□□□ -1.8
SCAF11-211ENST00000547950 TRBV10-2A0A0K0K1G8 114 aa3.81□□□□□ -1.8
SCAF11-211ENST00000547950 COLCA2A8K830 154 aa3.81□□□□□ -1.8
SCAF11-211ENST00000547950 NMUP48645 174 aa3.81□□□□□ -1.8
SCAF11-211ENST00000547950 ARL17AQ8IVW1 177 aa3.81□□□□□ -1.8
SCAF11-211ENST00000547950 A0A0J9YXY3 114 aa3.8□□□□□ -1.8
SCAF11-211ENST00000547950 SPINK1P00995 79 aa3.8□□□□□ -1.8
SCAF11-211ENST00000547950 MOBPQ13875 183 aa3.8□□□□□ -1.8
SCAF11-211ENST00000547950 LINC00483Q53H64 154 aa3.8□□□□□ -1.8
SCAF11-211ENST00000547950 ADAMTSL4-AS1Q5T5F5 129 aa3.8□□□□□ -1.8
SCAF11-211ENST00000547950 Q9BRP9 147 aa3.8□□□□□ -1.8
SCAF11-211ENST00000547950 SPANXB1Q9NS25 103 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-211ENST00000547950 TRAV23DV6A0A075B6W5 121 aa3.79□□□□□ -1.8
SCAF11-211ENST00000547950 E9PLD3 99 aa3.79□□□□□ -1.8
SCAF11-211ENST00000547950 NDUFC2O95298 119 aa3.79□□□□□ -1.8
SCAF11-211ENST00000547950 IGLV6-57P01721 117 aa3.79□□□□□ -1.8
SCAF11-211ENST00000547950 SOSTDC1Q6X4U4 206 aa3.79□□□□□ -1.8
SCAF11-211ENST00000547950 Q6ZRX8 168 aa3.79□□□□□ -1.8
SCAF11-211ENST00000547950 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-211ENST00000547950 SSBP3-AS1Q7Z2R9 100 aa3.79□□□□□ -1.8
SCAF11-211ENST00000547950 SYS1-DBNDD2H3BUS1 97 aa3.78□□□□□ -1.8
SCAF11-211ENST00000547950 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-211ENST00000547950 JOSD1Q15040 202 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-211ENST00000547950 ST20-AS1Q8NBB2 130 aa3.78□□□□□ -1.8
SCAF11-211ENST00000547950 OR13C6PQ8NH95 151 aa3.78□□□□□ -1.8
SCAF11-211ENST00000547950 HINT1P49773 126 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-211ENST00000547950 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
SCAF11-211ENST00000547950 C9orf153Q5TBE3 101 aa3.77□□□□□ -1.81
SCAF11-211ENST00000547950 SLC25A20O43772 301 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BKO60814 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BJP06899 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BOP23527 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BBP33778 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BDP58876 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BCP62807 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST2H2BEQ16778 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-211ENST00000547950 Q8N377 158 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 LINC00308Q8TCZ7 52 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BHQ93079 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BNQ99877 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 HIST1H2BMQ99879 126 aa3.76□□□□□ -1.81
SCAF11-211ENST00000547950 ZNF815PA8K554 130 aa3.75□□□□□ -1.81
SCAF11-211ENST00000547950 LINC01545Q5VT33 79 aa3.75□□□□□ -1.81
SCAF11-211ENST00000547950 PET117Q6UWS5 81 aa3.75□□□□□ -1.81
SCAF11-211ENST00000547950 HRCT1Q6UXD1 115 aa3.75□□□□□ -1.81
SCAF11-211ENST00000547950 TTTY13Q9BZ97 58 aa3.75□□□□□ -1.81
SCAF11-211ENST00000547950 SPANXCQ9NY87 97 aa3.75□□□□□ -1.81
SCAF11-211ENST00000547950 CBY1Q9Y3M2 126 aa3.75□□□□□ -1.81
SCAF11-211ENST00000547950 KRTDAPP60985 99 aa3.74□□□□□ -1.81
SCAF11-211ENST00000547950 RPS29P62273 56 aaKnown RBP3.74□□□□□ -1.81
SCAF11-211ENST00000547950 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
SCAF11-211ENST00000547950 DEFB105AQ8NG35 78 aa3.74□□□□□ -1.81
SCAF11-211ENST00000547950 LITAFQ99732 161 aa3.74□□□□□ -1.81
SCAF11-211ENST00000547950 C5orf52A6NGY3 159 aa3.73□□□□□ -1.81
SCAF11-211ENST00000547950 TIMM17BO60830 172 aa3.73□□□□□ -1.81
SCAF11-211ENST00000547950 C3orf79P0CE67 100 aa3.73□□□□□ -1.81
SCAF11-211ENST00000547950 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
SCAF11-211ENST00000547950 TAL2Q16559 108 aa3.73□□□□□ -1.81
SCAF11-211ENST00000547950 SPANXDQ9BXN6 97 aa3.73□□□□□ -1.81
SCAF11-211ENST00000547950 DHRS4-AS1Q9P1J3 65 aa3.73□□□□□ -1.81
SCAF11-211ENST00000547950 COX7BP24311 80 aa3.72□□□□□ -1.81
SCAF11-211ENST00000547950 C6orf99Q4VX62 202 aa3.72□□□□□ -1.81
SCAF11-211ENST00000547950 SLC25A34Q6PIV7 304 aa3.72□□□□□ -1.81
SCAF11-211ENST00000547950 SCGB1D4Q6XE38 83 aa3.72□□□□□ -1.81
SCAF11-211ENST00000547950 LINC00518Q8N0U6 118 aa3.72□□□□□ -1.81
SCAF11-211ENST00000547950 KRTAP4-1Q9BYQ7 146 aa3.72□□□□□ -1.81
SCAF11-211ENST00000547950 LAMTOR3Q9UHA4 124 aa3.72□□□□□ -1.81
SCAF11-211ENST00000547950 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
SCAF11-211ENST00000547950 A6NDN8 102 aa3.71□□□□□ -1.82
SCAF11-211ENST00000547950 SPRR1BP22528 89 aa3.71□□□□□ -1.82
SCAF11-211ENST00000547950 LINC01547P58512 204 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-211ENST00000547950 Q1RN00 199 aa3.71□□□□□ -1.82
SCAF11-211ENST00000547950 ATOH7Q8N100 152 aa3.71□□□□□ -1.82
SCAF11-211ENST00000547950 FAT4Q6V0I7 4981 aa3.7□□□□□ -1.82
SCAF11-211ENST00000547950 C20orf202A1L168 122 aa3.7□□□□□ -1.82
SCAF11-211ENST00000547950 ELOF1P60002 83 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms