RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 CLEC2BQ92478 149 aa13.96□□□□□ -0.17
RBFOX1-210ENST00000547605 DNAH11Q96DT5 4516 aa13.96□□□□□ -0.18
RBFOX1-210ENST00000547605 SMIM11BQ8TCY0 68 aa13.95□□□□□ -0.18
RBFOX1-210ENST00000547605 TRBV10-3A0A0K0K1G6 114 aa13.94□□□□□ -0.18
RBFOX1-210ENST00000547605 MRPL55Q7Z7F7 128 aaKnown RBP13.94□□□□□ -0.18
RBFOX1-210ENST00000547605 C7orf33Q8WU49 177 aa13.94□□□□□ -0.18
RBFOX1-210ENST00000547605 A0A1B0GVY2 172 aa13.93□□□□□ -0.18
RBFOX1-210ENST00000547605 PPDPFLQ8WWR9 84 aa13.93□□□□□ -0.18
RBFOX1-210ENST00000547605 IGLV6-57P01721 117 aa13.92□□□□□ -0.18
RBFOX1-210ENST00000547605 KRTAP10-1P60331 282 aa13.92□□□□□ -0.18
RBFOX1-210ENST00000547605 A0A087WYN8 130 aa13.91□□□□□ -0.18
RBFOX1-210ENST00000547605 LINC00167Q96N53 147 aa13.91□□□□□ -0.18
RBFOX1-210ENST00000547605 PKD1P98161 4303 aa13.91□□□□□ -0.18
RBFOX1-210ENST00000547605 RPL37AP8A6NKH3 93 aa13.9□□□□□ -0.18
RBFOX1-210ENST00000547605 PHF5AQ7RTV0 110 aaKnown RBP13.87□□□□□ -0.19
RBFOX1-210ENST00000547605 VPS25Q9BRG1 176 aa13.87□□□□□ -0.19
RBFOX1-210ENST00000547605 FAM30AQ9NZY2 134 aa13.87□□□□□ -0.19
RBFOX1-210ENST00000547605 DNAH5Q8TE73 4624 aa13.87□□□□□ -0.19
RBFOX1-210ENST00000547605 RYR3Q15413 4870 aa13.86□□□□□ -0.19
RBFOX1-210ENST00000547605 TRAV23DV6A0A075B6W5 121 aa13.86□□□□□ -0.19
RBFOX1-210ENST00000547605 CBY1Q9Y3M2 126 aa13.86□□□□□ -0.19
RBFOX1-210ENST00000547605 A0A1B0GX51 115 aa13.85□□□□□ -0.19
RBFOX1-210ENST00000547605 IGLV1-50A0A075B6I6 118 aa13.85□□□□□ -0.19
RBFOX1-210ENST00000547605 PLAC8Q9NZF1 115 aa13.85□□□□□ -0.19
RBFOX1-210ENST00000547605 SNCGO76070 127 aa13.84□□□□□ -0.19
RBFOX1-210ENST00000547605 DNAL4O96015 105 aa13.84□□□□□ -0.19
RBFOX1-210ENST00000547605 UBE2BP63146 152 aa13.84□□□□□ -0.19
RBFOX1-210ENST00000547605 C6orf99Q4VX62 202 aa13.82□□□□□ -0.2
RBFOX1-210ENST00000547605 Q6ZSA8 131 aa13.82□□□□□ -0.2
RBFOX1-210ENST00000547605 EPM2AB3EWF7 344 aa13.81□□□□□ -0.2
RBFOX1-210ENST00000547605 KCNQ1DNQ9H478 68 aa13.81□□□□□ -0.2
RBFOX1-210ENST00000547605 ZNF73O43830 326 aaPredicted RBP13.8□□□□□ -0.2
RBFOX1-210ENST00000547605 FAM218AQ96MZ4 157 aa13.8□□□□□ -0.2
RBFOX1-210ENST00000547605 DIRC1Q969H9 104 aa13.8□□□□□ -0.2
RBFOX1-210ENST00000547605 CIRBP-AS1Q8TBR5 109 aa13.79□□□□□ -0.2
RBFOX1-210ENST00000547605 PRYO14603 147 aa13.78□□□□□ -0.2
RBFOX1-210ENST00000547605 BAALC-AS2P0C853 105 aa13.78□□□□□ -0.2
RBFOX1-210ENST00000547605 SCXQ7RTU7 201 aa13.78□□□□□ -0.2
RBFOX1-210ENST00000547605 HAMPP81172 84 aa13.77□□□□□ -0.21
RBFOX1-210ENST00000547605 REG3GQ6UW15 175 aa13.76□□□□□ -0.21
RBFOX1-210ENST00000547605 KRTAP11-1Q8IUC1 163 aa13.74□□□□□ -0.21
RBFOX1-210ENST00000547605 TEX49A0A1B0GTD5 131 aa13.72□□□□□ -0.21
RBFOX1-210ENST00000547605 PKHD1P08F94 4074 aa13.72□□□□□ -0.21
RBFOX1-210ENST00000547605 ETDCA0A1B0GVM5 59 aa13.71□□□□□ -0.21
RBFOX1-210ENST00000547605 COX7BP24311 80 aa13.71□□□□□ -0.21
RBFOX1-210ENST00000547605 TRBV7-6A0A0J9YX20 115 aa13.71□□□□□ -0.22
RBFOX1-210ENST00000547605 SPRR1AP35321 89 aa13.7□□□□□ -0.22
RBFOX1-210ENST00000547605 ORMDL1Q9P0S3 153 aa13.7□□□□□ -0.22
RBFOX1-210ENST00000547605 ELOF1P60002 83 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-210ENST00000547605 H3BQ85 93 aa13.68□□□□□ -0.22
RBFOX1-210ENST00000547605 DNAH8Q96JB1 4490 aa13.68□□□□□ -0.22
RBFOX1-210ENST00000547605 INAFM2P0DMQ5 153 aa13.67□□□□□ -0.22
RBFOX1-210ENST00000547605 LINC00575Q6W349 94 aa13.67□□□□□ -0.22
RBFOX1-210ENST00000547605 FAM19A1Q7Z5A9 133 aa13.67□□□□□ -0.22
RBFOX1-210ENST00000547605 KRTAP4-16G5E9R7 235 aaPredicted RBP13.67□□□□□ -0.22
RBFOX1-210ENST00000547605 B5MCH6 92 aa13.65□□□□□ -0.22
RBFOX1-210ENST00000547605 FAM240AA0A1B0GVK7 77 aa13.64□□□□□ -0.23
RBFOX1-210ENST00000547605 TMEM256-PLSCR3K7ERE1 68 aa13.64□□□□□ -0.23
RBFOX1-210ENST00000547605 GHRHP01286 108 aa13.64□□□□□ -0.23
RBFOX1-210ENST00000547605 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
RBFOX1-210ENST00000547605 Q6ZRX8 168 aa13.64□□□□□ -0.23
RBFOX1-210ENST00000547605 LRP1BQ9NZR2 4599 aa13.63□□□□□ -0.23
RBFOX1-210ENST00000547605 hADV29S1A0JD25 119 aa13.63□□□□□ -0.23
RBFOX1-210ENST00000547605 LINC00528Q8N1L1 170 aa13.63□□□□□ -0.23
RBFOX1-210ENST00000547605 DYNC1H1Q14204 4646 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-210ENST00000547605 SIGMAR1Q99720 223 aa13.62□□□□□ -0.23
RBFOX1-210ENST00000547605 BCE1O60756 84 aa13.62□□□□□ -0.23
RBFOX1-210ENST00000547605 ACYP1P07311 99 aa13.62□□□□□ -0.23
RBFOX1-210ENST00000547605 UBE2AP49459 152 aa13.61□□□□□ -0.23
RBFOX1-210ENST00000547605 XGP55808 180 aa13.61□□□□□ -0.23
RBFOX1-210ENST00000547605 PRLHP81277 87 aa13.61□□□□□ -0.23
RBFOX1-210ENST00000547605 C1orf137Q5JT78 98 aa13.61□□□□□ -0.23
RBFOX1-210ENST00000547605 OBSCN-AS1Q96MR7 158 aa13.58□□□□□ -0.24
RBFOX1-210ENST00000547605 CDIP1Q9H305 208 aa13.58□□□□□ -0.24
RBFOX1-210ENST00000547605 JMJD7-PLA2G4BH0Y9G9 81 aa13.57□□□□□ -0.24
RBFOX1-210ENST00000547605 Q9BRP9 147 aa13.57□□□□□ -0.24
RBFOX1-210ENST00000547605 DHRS4-AS1Q9P1J3 65 aa13.57□□□□□ -0.24
RBFOX1-210ENST00000547605 HIGD2AQ9BW72 106 aa13.55□□□□□ -0.24
RBFOX1-210ENST00000547605 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-210ENST00000547605 H0Y9J4 135 aa13.53□□□□□ -0.24
RBFOX1-210ENST00000547605 SMR3BP02814 79 aaPredicted RBP13.53□□□□□ -0.24
RBFOX1-210ENST00000547605 SMCR5Q8TEV8 140 aa13.53□□□□□ -0.24
RBFOX1-210ENST00000547605 Q6ZQY7 126 aa13.51□□□□□ -0.25
RBFOX1-210ENST00000547605 ERC2-IT1O76042 136 aa13.5□□□□□ -0.25
RBFOX1-210ENST00000547605 IGLV7-43P04211 117 aa13.49□□□□□ -0.25
RBFOX1-210ENST00000547605 KRTAP13-1Q8IUC0 172 aa13.49□□□□□ -0.25
RBFOX1-210ENST00000547605 SCGB1A1P11684 91 aa13.48□□□□□ -0.25
RBFOX1-210ENST00000547605 ZNF861PO60384 105 aa13.47□□□□□ -0.25
RBFOX1-210ENST00000547605 CDK2AP2O75956 126 aa13.45□□□□□ -0.26
RBFOX1-210ENST00000547605 RPL37AP61513 92 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-210ENST00000547605 APOBP04114 4563 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-210ENST00000547605 ST20-AS1Q8NBB2 130 aa13.44□□□□□ -0.26
RBFOX1-210ENST00000547605 DEFB105AQ8NG35 78 aa13.44□□□□□ -0.26
RBFOX1-210ENST00000547605 C14orf132Q9NPU4 83 aa13.43□□□□□ -0.26
RBFOX1-210ENST00000547605 C21orf62-AS1Q17RA5 79 aa13.42□□□□□ -0.26
RBFOX1-210ENST00000547605 GAGE2AQ6NT46 116 aa13.42□□□□□ -0.26
RBFOX1-210ENST00000547605 LAMTOR3Q9UHA4 124 aa13.41□□□□□ -0.26
RBFOX1-210ENST00000547605 PDE6GP18545 87 aa13.4□□□□□ -0.26
RBFOX1-210ENST00000547605 RBM3P98179 157 aaKnown RBP13.4□□□□□ -0.26
RBFOX1-210ENST00000547605 CCKP06307 115 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms