RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 PMCHL2Q9BQD1 86 aa12.49□□□□□ -0.41
PRDM4-202ENST00000547188 MAP1LC3CQ9BXW4 147 aa12.49□□□□□ -0.41
PRDM4-202ENST00000547188 LINC00483Q53H64 154 aa12.48□□□□□ -0.41
PRDM4-202ENST00000547188 COA6Q5JTJ3 125 aaKnown RBP12.48□□□□□ -0.41
PRDM4-202ENST00000547188 TSPEAR-AS2P59090 65 aa12.47□□□□□ -0.41
PRDM4-202ENST00000547188 RPL24P83731 157 aaKnown RBP12.47□□□□□ -0.41
PRDM4-202ENST00000547188 LEPROTO15243 131 aa12.46□□□□□ -0.41
PRDM4-202ENST00000547188 IGKCP01834 107 aa12.46□□□□□ -0.41
PRDM4-202ENST00000547188 HERV-K104P63124 156 aa12.46□□□□□ -0.41
PRDM4-202ENST00000547188 LINC00158P58513 81 aa12.45□□□□□ -0.42
PRDM4-202ENST00000547188 SYS1-DBNDD2H3BUS1 97 aa12.44□□□□□ -0.42
PRDM4-202ENST00000547188 MYMXA0A1B0GTQ4 84 aa12.43□□□□□ -0.42
PRDM4-202ENST00000547188 SMIM13P0DJ93 91 aa12.43□□□□□ -0.42
PRDM4-202ENST00000547188 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
PRDM4-202ENST00000547188 LCE2BO14633 110 aa12.42□□□□□ -0.42
PRDM4-202ENST00000547188 J3QQQ9 107 aa12.41□□□□□ -0.42
PRDM4-202ENST00000547188 Q6Q795 121 aa12.41□□□□□ -0.42
PRDM4-202ENST00000547188 LINC00587B1AMM8 73 aa12.4□□□□□ -0.42
PRDM4-202ENST00000547188 S100A1P23297 94 aa12.4□□□□□ -0.42
PRDM4-202ENST00000547188 HERVK_113P61574 105 aa12.4□□□□□ -0.42
PRDM4-202ENST00000547188 LINC01545Q5VT33 79 aa12.4□□□□□ -0.42
PRDM4-202ENST00000547188 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
PRDM4-202ENST00000547188 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
PRDM4-202ENST00000547188 NMUP48645 174 aa12.38□□□□□ -0.43
PRDM4-202ENST00000547188 PET117Q6UWS5 81 aa12.38□□□□□ -0.43
PRDM4-202ENST00000547188 IGLV6-57P01721 117 aa12.37□□□□□ -0.43
PRDM4-202ENST00000547188 E9PLD3 99 aa12.36□□□□□ -0.43
PRDM4-202ENST00000547188 ATP6V1G1O75348 118 aa12.35□□□□□ -0.43
PRDM4-202ENST00000547188 C3orf79P0CE67 100 aa12.35□□□□□ -0.43
PRDM4-202ENST00000547188 LOC107984156A0A0G2JMH3 177 aa12.34□□□□□ -0.43
PRDM4-202ENST00000547188 LGALS3P17931 250 aaKnown RBP12.34□□□□□ -0.43
PRDM4-202ENST00000547188 ARL17AQ8IVW1 177 aa12.34□□□□□ -0.43
PRDM4-202ENST00000547188 BOD1L2Q8IYS8 172 aa12.33□□□□□ -0.44
PRDM4-202ENST00000547188 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
PRDM4-202ENST00000547188 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
PRDM4-202ENST00000547188 RPL37P61927 97 aaKnown RBP12.31□□□□□ -0.44
PRDM4-202ENST00000547188 KRTAP6-3Q3LI67 103 aa12.3□□□□□ -0.44
PRDM4-202ENST00000547188 ETDCA0A1B0GVM5 59 aa12.29□□□□□ -0.44
PRDM4-202ENST00000547188 PRYO14603 147 aa12.29□□□□□ -0.44
PRDM4-202ENST00000547188 SPRR1AP35321 89 aa12.29□□□□□ -0.44
PRDM4-202ENST00000547188 KRTDAPP60985 99 aa12.29□□□□□ -0.44
PRDM4-202ENST00000547188 A0A0J9YXY3 114 aa12.28□□□□□ -0.44
PRDM4-202ENST00000547188 NCR3O14931 201 aa12.26□□□□□ -0.45
PRDM4-202ENST00000547188 HRCT1Q6UXD1 115 aa12.26□□□□□ -0.45
PRDM4-202ENST00000547188 ADAMTSL4-AS1Q5T5F5 129 aa12.25□□□□□ -0.45
PRDM4-202ENST00000547188 MT2AP02795 61 aa12.24□□□□□ -0.45
PRDM4-202ENST00000547188 KCNQ1DNQ9H478 68 aa12.24□□□□□ -0.45
PRDM4-202ENST00000547188 EIF4EBP3O60516 100 aaPredicted RBP12.23□□□□□ -0.45
PRDM4-202ENST00000547188 SOSTDC1Q6X4U4 206 aa12.23□□□□□ -0.45
PRDM4-202ENST00000547188 LITAFQ99732 161 aa12.23□□□□□ -0.45
PRDM4-202ENST00000547188 TRBV10-2A0A0K0K1G8 114 aa12.22□□□□□ -0.45
PRDM4-202ENST00000547188 TRBV10-3A0A0K0K1G6 114 aa12.21□□□□□ -0.45
PRDM4-202ENST00000547188 HIST3H2BBQ8N257 126 aa12.21□□□□□ -0.45
PRDM4-202ENST00000547188 LIMD2Q9BT23 127 aa12.21□□□□□ -0.45
PRDM4-202ENST00000547188 NEBP20929 6669 aa12.21□□□□□ -0.46
PRDM4-202ENST00000547188 C20orf202A1L168 122 aa12.2□□□□□ -0.46
PRDM4-202ENST00000547188 TIMM17BO60830 172 aa12.2□□□□□ -0.46
PRDM4-202ENST00000547188 NDUFC2O95298 119 aa12.2□□□□□ -0.46
PRDM4-202ENST00000547188 TTTY13Q9BZ97 58 aa12.2□□□□□ -0.46
PRDM4-202ENST00000547188 HIST1H2BLQ99880 126 aa12.19□□□□□ -0.46
PRDM4-202ENST00000547188 SPANXB1Q9NS25 103 aaPredicted RBP12.19□□□□□ -0.46
PRDM4-202ENST00000547188 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
PRDM4-202ENST00000547188 MIEN1Q9BRT3 115 aa12.18□□□□□ -0.46
PRDM4-202ENST00000547188 B5MCH6 92 aa12.17□□□□□ -0.46
PRDM4-202ENST00000547188 ANKRD39Q53RE8 183 aa12.17□□□□□ -0.46
PRDM4-202ENST00000547188 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
PRDM4-202ENST00000547188 Q9BRP9 147 aa12.16□□□□□ -0.46
PRDM4-202ENST00000547188 KRTAP9-3Q9BYQ3 159 aa12.16□□□□□ -0.46
PRDM4-202ENST00000547188 MT1FP04733 61 aa12.15□□□□□ -0.46
PRDM4-202ENST00000547188 DDTP30046 118 aa12.15□□□□□ -0.46
PRDM4-202ENST00000547188 NPC2P61916 151 aa12.15□□□□□ -0.46
PRDM4-202ENST00000547188 LINC00846Q9NV44 126 aa12.15□□□□□ -0.46
PRDM4-202ENST00000547188 AKR1D1P51857 326 aa12.14□□□□□ -0.47
PRDM4-202ENST00000547188 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
PRDM4-202ENST00000547188 S100A2P29034 98 aa12.12□□□□□ -0.47
PRDM4-202ENST00000547188 KRTAP19-6Q3LI70 58 aa12.11□□□□□ -0.47
PRDM4-202ENST00000547188 S100A6P06703 90 aa12.09□□□□□ -0.47
PRDM4-202ENST00000547188 S100A12P80511 92 aa12.09□□□□□ -0.47
PRDM4-202ENST00000547188 SPANXCQ9NY87 97 aa12.09□□□□□ -0.47
PRDM4-202ENST00000547188 SNRPEP62304 92 aaKnown RBP12.08□□□□□ -0.48
PRDM4-202ENST00000547188 S100A7L2Q5SY68 101 aa12.08□□□□□ -0.48
PRDM4-202ENST00000547188 PCP2Q8IVA1 136 aa12.08□□□□□ -0.48
PRDM4-202ENST00000547188 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
PRDM4-202ENST00000547188 C5orf52A6NGY3 159 aa12.05□□□□□ -0.48
PRDM4-202ENST00000547188 SCGB1D4Q6XE38 83 aa12.05□□□□□ -0.48
PRDM4-202ENST00000547188 ST20-AS1Q8NBB2 130 aa12.05□□□□□ -0.48
PRDM4-202ENST00000547188 TRAV23DV6A0A075B6W5 121 aa12.04□□□□□ -0.48
PRDM4-202ENST00000547188 Q6ZRX8 168 aa12.04□□□□□ -0.48
PRDM4-202ENST00000547188 KRTAP10-10P60014 251 aa12.03□□□□□ -0.48
PRDM4-202ENST00000547188 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.49
PRDM4-202ENST00000547188 H7C2G1 150 aa12.01□□□□□ -0.49
PRDM4-202ENST00000547188 IFITM1P13164 125 aa12□□□□□ -0.49
PRDM4-202ENST00000547188 KRTAP20-1Q3LI63 56 aa12□□□□□ -0.49
PRDM4-202ENST00000547188 Q6ZVH6 145 aa12□□□□□ -0.49
PRDM4-202ENST00000547188 LINC00518Q8N0U6 118 aa11.99□□□□□ -0.49
PRDM4-202ENST00000547188 CBY1Q9Y3M2 126 aa11.99□□□□□ -0.49
PRDM4-202ENST00000547188 C1orf195Q5TG92 126 aa11.98□□□□□ -0.49
PRDM4-202ENST00000547188 OR13C6PQ8NH95 151 aa11.97□□□□□ -0.49
PRDM4-202ENST00000547188 HSBP1L1C9JCN9 74 aa11.96□□□□□ -0.49
PRDM4-202ENST00000547188 COPS9Q8WXC6 57 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms