RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 C3orf22Q8N5N4 141 aa7.67□□□□□ -1.18
CCDC38-202ENST00000546386 hADV29S1A0JD25 119 aa7.66□□□□□ -1.18
CCDC38-202ENST00000546386 LINC00575Q6W349 94 aa7.66□□□□□ -1.18
CCDC38-202ENST00000546386 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
CCDC38-202ENST00000546386 LINC00167Q96N53 147 aa7.66□□□□□ -1.18
CCDC38-202ENST00000546386 DNAH11Q96DT5 4516 aa7.66□□□□□ -1.18
CCDC38-202ENST00000546386 M0R378 163 aa7.66□□□□□ -1.18
CCDC38-202ENST00000546386 HAMPP81172 84 aa7.66□□□□□ -1.18
CCDC38-202ENST00000546386 ORMDL1Q9P0S3 153 aa7.66□□□□□ -1.18
CCDC38-202ENST00000546386 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.18
CCDC38-202ENST00000546386 CBY1Q9Y3M2 126 aa7.65□□□□□ -1.18
CCDC38-202ENST00000546386 LAMTOR3Q9UHA4 124 aa7.65□□□□□ -1.19
CCDC38-202ENST00000546386 MUC7Q8TAX7 377 aa7.64□□□□□ -1.19
CCDC38-202ENST00000546386 SIGMAR1Q99720 223 aa7.64□□□□□ -1.19
CCDC38-202ENST00000546386 LRCOL1A6NCL2 159 aa7.63□□□□□ -1.19
CCDC38-202ENST00000546386 COX7BP24311 80 aa7.63□□□□□ -1.19
CCDC38-202ENST00000546386 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
CCDC38-202ENST00000546386 PPDPFQ9H3Y8 114 aa7.63□□□□□ -1.19
CCDC38-202ENST00000546386 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
CCDC38-202ENST00000546386 A0A0G2JQZ4 141 aa7.63□□□□□ -1.19
CCDC38-202ENST00000546386 ST20-AS1Q8NBB2 130 aa7.63□□□□□ -1.19
CCDC38-202ENST00000546386 DNAH17Q9UFH2 4485 aa7.63□□□□□ -1.19
CCDC38-202ENST00000546386 PRLHP81277 87 aa7.62□□□□□ -1.19
CCDC38-202ENST00000546386 Q6ZRN7 208 aaPredicted RBP7.62□□□□□ -1.19
CCDC38-202ENST00000546386 M0QXV9 152 aa7.62□□□□□ -1.19
CCDC38-202ENST00000546386 SMCR5Q8TEV8 140 aa7.62□□□□□ -1.19
CCDC38-202ENST00000546386 KMT2CQ8NEZ4 4911 aaKnown RBP7.61□□□□□ -1.19
CCDC38-202ENST00000546386 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
CCDC38-202ENST00000546386 MRPL55Q7Z7F7 128 aaKnown RBP7.61□□□□□ -1.19
CCDC38-202ENST00000546386 ERC2-IT1O76042 136 aa7.61□□□□□ -1.19
CCDC38-202ENST00000546386 SVIPQ8NHG7 77 aa7.6□□□□□ -1.19
CCDC38-202ENST00000546386 ELOF1P60002 83 aaKnown RBP7.59□□□□□ -1.19
CCDC38-202ENST00000546386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.59□□□□□ -1.19
CCDC38-202ENST00000546386 DNAH8Q96JB1 4490 aa7.59□□□□□ -1.19
CCDC38-202ENST00000546386 Q9BRP9 147 aa7.59□□□□□ -1.2
CCDC38-202ENST00000546386 IGLV1-50A0A075B6I6 118 aa7.58□□□□□ -1.2
CCDC38-202ENST00000546386 UBE2BP63146 152 aa7.58□□□□□ -1.2
CCDC38-202ENST00000546386 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
CCDC38-202ENST00000546386 ETDCA0A1B0GVM5 59 aa7.56□□□□□ -1.2
CCDC38-202ENST00000546386 TLX1NBP0CAT3 122 aa7.56□□□□□ -1.2
CCDC38-202ENST00000546386 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
CCDC38-202ENST00000546386 DNAH5Q8TE73 4624 aa7.56□□□□□ -1.2
CCDC38-202ENST00000546386 A0A087WTM6 91 aa7.56□□□□□ -1.2
CCDC38-202ENST00000546386 C16orf90A8MZG2 172 aa7.56□□□□□ -1.2
CCDC38-202ENST00000546386 TMEM256-PLSCR3K7ERE1 68 aa7.56□□□□□ -1.2
CCDC38-202ENST00000546386 SDIM1Q6ZPB5 146 aa7.55□□□□□ -1.2
CCDC38-202ENST00000546386 KCNQ1DNQ9H478 68 aa7.55□□□□□ -1.2
CCDC38-202ENST00000546386 IGKV3D-7A0A0C4DH55 119 aa7.55□□□□□ -1.2
CCDC38-202ENST00000546386 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
CCDC38-202ENST00000546386 FAT2Q9NYQ8 4349 aa7.54□□□□□ -1.2
CCDC38-202ENST00000546386 SACSQ9NZJ4 4579 aa7.54□□□□□ -1.2
CCDC38-202ENST00000546386 SNCGO76070 127 aa7.54□□□□□ -1.2
CCDC38-202ENST00000546386 CNBPP62633 177 aaKnown RBP7.54□□□□□ -1.2
CCDC38-202ENST00000546386 C9orf163Q8N9P6 203 aa7.53□□□□□ -1.2
CCDC38-202ENST00000546386 RBM3P98179 157 aaKnown RBP7.52□□□□□ -1.21
CCDC38-202ENST00000546386 B5MCH6 92 aa7.52□□□□□ -1.21
CCDC38-202ENST00000546386 C1orf134Q5TEV5 83 aa7.52□□□□□ -1.21
CCDC38-202ENST00000546386 REG3GQ6UW15 175 aa7.52□□□□□ -1.21
CCDC38-202ENST00000546386 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.52□□□□□ -1.21
CCDC38-202ENST00000546386 Q6ZRX8 168 aa7.52□□□□□ -1.21
CCDC38-202ENST00000546386 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
CCDC38-202ENST00000546386 LRP1BQ9NZR2 4599 aa7.51□□□□□ -1.21
CCDC38-202ENST00000546386 RTL8CO15255 209 aa7.51□□□□□ -1.21
CCDC38-202ENST00000546386 INAFM2P0DMQ5 153 aa7.51□□□□□ -1.21
CCDC38-202ENST00000546386 KRTAP10-2P60368 255 aa7.51□□□□□ -1.21
CCDC38-202ENST00000546386 Q6ZR54 194 aa7.51□□□□□ -1.21
CCDC38-202ENST00000546386 Q8N377 158 aa7.5□□□□□ -1.21
CCDC38-202ENST00000546386 LINC00476Q8WZB0 136 aa7.5□□□□□ -1.21
CCDC38-202ENST00000546386 WWC2-AS2Q96NR7 200 aa7.5□□□□□ -1.21
CCDC38-202ENST00000546386 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
CCDC38-202ENST00000546386 SCXQ7RTU7 201 aa7.5□□□□□ -1.21
CCDC38-202ENST00000546386 NDUFV3P56181 108 aaKnown RBP7.49□□□□□ -1.21
CCDC38-202ENST00000546386 PKD1P98161 4303 aa7.49□□□□□ -1.21
CCDC38-202ENST00000546386 A0A087WVE0 104 aa7.49□□□□□ -1.21
CCDC38-202ENST00000546386 F8WDY8 70 aa7.49□□□□□ -1.21
CCDC38-202ENST00000546386 C3orf84H3BNL1 204 aa7.49□□□□□ -1.21
CCDC38-202ENST00000546386 OBSCN-AS1Q96MR7 158 aa7.49□□□□□ -1.21
CCDC38-202ENST00000546386 IGLV5-52A0A0A0MRZ9 124 aa7.48□□□□□ -1.21
CCDC38-202ENST00000546386 C14orf177Q52M58 125 aa7.48□□□□□ -1.21
CCDC38-202ENST00000546386 DSCR8Q96T75 97 aa7.48□□□□□ -1.21
CCDC38-202ENST00000546386 ANAPC11Q9NYG5 84 aa7.47□□□□□ -1.21
CCDC38-202ENST00000546386 FAM30AQ9NZY2 134 aa7.47□□□□□ -1.21
CCDC38-202ENST00000546386 CCKP06307 115 aa7.46□□□□□ -1.21
CCDC38-202ENST00000546386 A0A1B0GX51 115 aa7.46□□□□□ -1.22
CCDC38-202ENST00000546386 EPM2AB3EWF7 344 aa7.45□□□□□ -1.22
CCDC38-202ENST00000546386 LINC01547P58512 204 aaPredicted RBP7.45□□□□□ -1.22
CCDC38-202ENST00000546386 Q6ZQT0 140 aa7.45□□□□□ -1.22
CCDC38-202ENST00000546386 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
CCDC38-202ENST00000546386 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
CCDC38-202ENST00000546386 PRYO14603 147 aa7.44□□□□□ -1.22
CCDC38-202ENST00000546386 SPRR1AP35321 89 aa7.44□□□□□ -1.22
CCDC38-202ENST00000546386 HIST1H4AP62805 103 aaKnown RBP7.44□□□□□ -1.22
CCDC38-202ENST00000546386 IGLV5-37A0A075B6J1 123 aa7.43□□□□□ -1.22
CCDC38-202ENST00000546386 UBE2AP49459 152 aa7.43□□□□□ -1.22
CCDC38-202ENST00000546386 Q8N9L7 120 aa7.42□□□□□ -1.22
CCDC38-202ENST00000546386 FAM240AA0A1B0GVK7 77 aa7.42□□□□□ -1.22
CCDC38-202ENST00000546386 DEFB116Q30KQ4 102 aa7.42□□□□□ -1.22
CCDC38-202ENST00000546386 SPACA4Q8TDM5 124 aa7.41□□□□□ -1.22
CCDC38-202ENST00000546386 TRBV7-6A0A0J9YX20 115 aa7.41□□□□□ -1.22
CCDC38-202ENST00000546386 VPS13BQ7Z7G8 4022 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms