RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 IGKV4-1P06312 121 aa4.24□□□□□ -1.73
SNHG1-225ENST00000545920 DNAH10OSP0CZ25 163 aa4.24□□□□□ -1.73
SNHG1-225ENST00000545920 HTN3P15516 51 aa4.24□□□□□ -1.73
SNHG1-225ENST00000545920 Q75L30 129 aa4.24□□□□□ -1.73
SNHG1-225ENST00000545920 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
SNHG1-225ENST00000545920 ASH1LQ9NR48 2969 aaKnown RBP4.23□□□□□ -1.73
SNHG1-225ENST00000545920 MYO18BQ8IUG5 2567 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 LCE6AA0A183 80 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 RPL37AP8A6NKH3 93 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 F8WEM9 126 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 M0R2N4 97 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 DEFB4AO15263 64 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 SPRR1AP35321 89 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 CFAP46Q8IYW2 2715 aa4.23□□□□□ -1.73
SNHG1-225ENST00000545920 UBR5O95071 2799 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-225ENST00000545920 TLN2Q9Y4G6 2542 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 IGSF10Q6WRI0 2623 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 Q6ZRX8 168 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 Q8NBF4 154 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 WNK1Q9H4A3 2382 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 LRRK2Q5S007 2527 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 FLNBO75369 2602 aaKnown RBP4.22□□□□□ -1.73
SNHG1-225ENST00000545920 SVEP1Q4LDE5 3571 aa4.22□□□□□ -1.73
SNHG1-225ENST00000545920 ETDCA0A1B0GVM5 59 aa4.21□□□□□ -1.74
SNHG1-225ENST00000545920 Q6ZRP5 223 aa4.21□□□□□ -1.74
SNHG1-225ENST00000545920 WFDC10BQ8IUB3 73 aa4.21□□□□□ -1.74
SNHG1-225ENST00000545920 Q8N377 158 aa4.21□□□□□ -1.74
SNHG1-225ENST00000545920 TM2D3Q9BRN9 247 aa4.21□□□□□ -1.74
SNHG1-225ENST00000545920 PKIGQ9Y2B9 76 aa4.21□□□□□ -1.74
SNHG1-225ENST00000545920 COL12A1Q99715 3063 aa4.2□□□□□ -1.74
SNHG1-225ENST00000545920 FBN2P35556 2912 aa4.2□□□□□ -1.74
SNHG1-225ENST00000545920 IGLV1-50A0A075B6I6 118 aa4.2□□□□□ -1.74
SNHG1-225ENST00000545920 KRTAP4-16G5E9R7 235 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-225ENST00000545920 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
SNHG1-225ENST00000545920 C7orf33Q8WU49 177 aa4.2□□□□□ -1.74
SNHG1-225ENST00000545920 SNURFQ9Y675 71 aa4.2□□□□□ -1.74
SNHG1-225ENST00000545920 POLQO75417 2590 aa4.2□□□□□ -1.74
SNHG1-225ENST00000545920 TEP1Q99973 2627 aaKnown RBP4.2□□□□□ -1.74
SNHG1-225ENST00000545920 IGKV2D-24A0A075B6R9 120 aa4.19□□□□□ -1.74
SNHG1-225ENST00000545920 NDUFB1O75438 58 aa4.19□□□□□ -1.74
SNHG1-225ENST00000545920 ESRGQ1W209 222 aa4.19□□□□□ -1.74
SNHG1-225ENST00000545920 C1orf137Q5JT78 98 aa4.19□□□□□ -1.74
SNHG1-225ENST00000545920 HRCT1Q6UXD1 115 aa4.19□□□□□ -1.74
SNHG1-225ENST00000545920 MXRA5Q9NR99 2828 aa4.19□□□□□ -1.74
SNHG1-225ENST00000545920 FLNCQ14315 2725 aa4.18□□□□□ -1.74
SNHG1-225ENST00000545920 ITPR3Q14573 2671 aa4.18□□□□□ -1.74
SNHG1-225ENST00000545920 IGLV8-61A0A075B6I0 122 aa4.18□□□□□ -1.74
SNHG1-225ENST00000545920 DEFB131BA0A096LNP1 70 aa4.18□□□□□ -1.74
SNHG1-225ENST00000545920 H3BPC8 53 aa4.18□□□□□ -1.74
SNHG1-225ENST00000545920 Q6ZTC4 211 aa4.18□□□□□ -1.74
SNHG1-225ENST00000545920 HIVEP2P31629 2446 aa4.18□□□□□ -1.74
SNHG1-225ENST00000545920 SCXQ7RTU7 201 aa4.17□□□□□ -1.74
SNHG1-225ENST00000545920 C11orf45Q8TAV5 145 aa4.17□□□□□ -1.74
SNHG1-225ENST00000545920 SONP18583 2426 aaKnown RBP4.17□□□□□ -1.74
SNHG1-225ENST00000545920 EPG5Q9HCE0 2579 aa4.17□□□□□ -1.74
SNHG1-225ENST00000545920 TEX15Q9BXT5 2789 aa4.17□□□□□ -1.74
SNHG1-225ENST00000545920 FASNP49327 2511 aaKnown RBP4.17□□□□□ -1.74
SNHG1-225ENST00000545920 JMJD1CQ15652 2540 aa4.17□□□□□ -1.74
SNHG1-225ENST00000545920 ZFHX3Q15911 3703 aa4.17□□□□□ -1.74
SNHG1-225ENST00000545920 A0A1W2PNM2 257 aa4.16□□□□□ -1.74
SNHG1-225ENST00000545920 INAFM1C9JVW0 142 aa4.16□□□□□ -1.74
SNHG1-225ENST00000545920 FP248Q71RG6 208 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-225ENST00000545920 MRPL55Q7Z7F7 128 aaKnown RBP4.16□□□□□ -1.74
SNHG1-225ENST00000545920 ZANQ9Y493 2812 aa4.16□□□□□ -1.74
SNHG1-225ENST00000545920 ABCA12Q86UK0 2595 aa4.15□□□□□ -1.74
SNHG1-225ENST00000545920 UTP20O75691 2785 aaKnown RBP4.15□□□□□ -1.74
SNHG1-225ENST00000545920 C3orf84H3BNL1 204 aa4.15□□□□□ -1.75
SNHG1-225ENST00000545920 REG3GQ6UW15 175 aa4.15□□□□□ -1.75
SNHG1-225ENST00000545920 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.75
SNHG1-225ENST00000545920 Q9BRP9 147 aa4.15□□□□□ -1.75
SNHG1-225ENST00000545920 CYP4F30PQ9H0H9 118 aa4.15□□□□□ -1.75
SNHG1-225ENST00000545920 V9GYY9 64 aa4.15□□□□□ -1.75
SNHG1-225ENST00000545920 H0Y9J4 135 aa4.14□□□□□ -1.75
SNHG1-225ENST00000545920 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
SNHG1-225ENST00000545920 SMR3AQ99954 134 aa4.14□□□□□ -1.75
SNHG1-225ENST00000545920 VPS13CQ709C8 3753 aa4.14□□□□□ -1.75
SNHG1-225ENST00000545920 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
SNHG1-225ENST00000545920 CCDC168Q8NDH2 2452 aa4.13□□□□□ -1.75
SNHG1-225ENST00000545920 IGLV5-52A0A0A0MRZ9 124 aa4.13□□□□□ -1.75
SNHG1-225ENST00000545920 HCG22E2RYF7 251 aa4.13□□□□□ -1.75
SNHG1-225ENST00000545920 CNBPP62633 177 aaKnown RBP4.13□□□□□ -1.75
SNHG1-225ENST00000545920 SMIM29Q86T20 159 aa4.13□□□□□ -1.75
SNHG1-225ENST00000545920 PRR26Q8N8Z3 221 aa4.13□□□□□ -1.75
SNHG1-225ENST00000545920 DEFB105AQ8NG35 78 aa4.13□□□□□ -1.75
SNHG1-225ENST00000545920 FN1P02751 2386 aaKnown RBP4.13□□□□□ -1.75
SNHG1-225ENST00000545920 FLNAP21333 2647 aaKnown RBP4.12□□□□□ -1.75
SNHG1-225ENST00000545920 APCP25054 2843 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 hDV103S1A0JD37 113 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 C16orf90A8MZG2 172 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 SPRR1BP22528 89 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 MP68P56378 58 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 DSCR10P59022 87 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 UBE2BP63146 152 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 Q1T7F1 81 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 Q8N9L7 120 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
SNHG1-225ENST00000545920 LINC00588Q9Y4M8 146 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms