RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 MOBPQ13875 183 aa7.73□□□□□ -1.17
SEMA4D-224ENST00000544513 LINC01547P58512 204 aaPredicted RBP7.72□□□□□ -1.17
SEMA4D-224ENST00000544513 TSPEAR-AS2P59090 65 aa7.72□□□□□ -1.17
SEMA4D-224ENST00000544513 Q6ZRX8 168 aa7.72□□□□□ -1.17
SEMA4D-224ENST00000544513 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.18
SEMA4D-224ENST00000544513 H0Y8G0 127 aa7.71□□□□□ -1.18
SEMA4D-224ENST00000544513 SLC25A20O43772 301 aa7.71□□□□□ -1.18
SEMA4D-224ENST00000544513 DDTP30046 118 aa7.71□□□□□ -1.18
SEMA4D-224ENST00000544513 S100A12P80511 92 aa7.71□□□□□ -1.18
SEMA4D-224ENST00000544513 LCE2DQ5TA82 110 aaPredicted RBP7.71□□□□□ -1.18
SEMA4D-224ENST00000544513 HIST1H2BLQ99880 126 aa7.71□□□□□ -1.18
SEMA4D-224ENST00000544513 XP32Q5T750 250 aa7.7□□□□□ -1.18
SEMA4D-224ENST00000544513 SYS1-DBNDD2H3BUS1 97 aa7.69□□□□□ -1.18
SEMA4D-224ENST00000544513 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
SEMA4D-224ENST00000544513 KRTDAPP60985 99 aa7.69□□□□□ -1.18
SEMA4D-224ENST00000544513 SPANXB1Q9NS25 103 aaPredicted RBP7.69□□□□□ -1.18
SEMA4D-224ENST00000544513 C20orf202A1L168 122 aa7.68□□□□□ -1.18
SEMA4D-224ENST00000544513 LEPROTO15243 131 aa7.68□□□□□ -1.18
SEMA4D-224ENST00000544513 PET117Q6UWS5 81 aa7.68□□□□□ -1.18
SEMA4D-224ENST00000544513 NDUFC2O95298 119 aa7.67□□□□□ -1.18
SEMA4D-224ENST00000544513 C3orf79P0CE67 100 aa7.67□□□□□ -1.18
SEMA4D-224ENST00000544513 AKR1D1P51857 326 aa7.67□□□□□ -1.18
SEMA4D-224ENST00000544513 J3QQQ9 107 aa7.66□□□□□ -1.18
SEMA4D-224ENST00000544513 PLNP26678 52 aa7.66□□□□□ -1.18
SEMA4D-224ENST00000544513 LCE2CQ5TA81 110 aa7.66□□□□□ -1.18
SEMA4D-224ENST00000544513 DPM2O94777 84 aa7.65□□□□□ -1.18
SEMA4D-224ENST00000544513 NMUP48645 174 aa7.65□□□□□ -1.18
SEMA4D-224ENST00000544513 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
SEMA4D-224ENST00000544513 JOSD1Q15040 202 aaPredicted RBP7.64□□□□□ -1.19
SEMA4D-224ENST00000544513 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
SEMA4D-224ENST00000544513 TRAV23DV6A0A075B6W5 121 aa7.63□□□□□ -1.19
SEMA4D-224ENST00000544513 EIF4EBP3O60516 100 aaPredicted RBP7.63□□□□□ -1.19
SEMA4D-224ENST00000544513 IGKCP01834 107 aa7.63□□□□□ -1.19
SEMA4D-224ENST00000544513 KRTAP19-2Q3LHN2 52 aa7.63□□□□□ -1.19
SEMA4D-224ENST00000544513 S100A7L2Q5SY68 101 aa7.63□□□□□ -1.19
SEMA4D-224ENST00000544513 ZNF73O43830 326 aaPredicted RBP7.62□□□□□ -1.19
SEMA4D-224ENST00000544513 SOSTDC1Q6X4U4 206 aa7.62□□□□□ -1.19
SEMA4D-224ENST00000544513 ST20-AS1Q8NBB2 130 aa7.62□□□□□ -1.19
SEMA4D-224ENST00000544513 PMCHL2Q9BQD1 86 aa7.62□□□□□ -1.19
SEMA4D-224ENST00000544513 MIEN1Q9BRT3 115 aa7.62□□□□□ -1.19
SEMA4D-224ENST00000544513 SCGB1D1O95968 90 aa7.61□□□□□ -1.19
SEMA4D-224ENST00000544513 ADAMTSL4-AS1Q5T5F5 129 aa7.61□□□□□ -1.19
SEMA4D-224ENST00000544513 C9orf153Q5TBE3 101 aa7.61□□□□□ -1.19
SEMA4D-224ENST00000544513 HERVK_113P61574 105 aa7.6□□□□□ -1.19
SEMA4D-224ENST00000544513 A0A0J9YXY3 114 aa7.59□□□□□ -1.19
SEMA4D-224ENST00000544513 LGALS3P17931 250 aaKnown RBP7.59□□□□□ -1.19
SEMA4D-224ENST00000544513 SPRR1BP22528 89 aa7.59□□□□□ -1.19
SEMA4D-224ENST00000544513 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
SEMA4D-224ENST00000544513 HSBP1L1C9JCN9 74 aa7.57□□□□□ -1.2
SEMA4D-224ENST00000544513 NPC2P61916 151 aa7.56□□□□□ -1.2
SEMA4D-224ENST00000544513 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
SEMA4D-224ENST00000544513 E9PLD3 99 aa7.55□□□□□ -1.2
SEMA4D-224ENST00000544513 MT1HP80294 61 aa7.55□□□□□ -1.2
SEMA4D-224ENST00000544513 LITAFQ99732 161 aa7.55□□□□□ -1.2
SEMA4D-224ENST00000544513 CBY1Q9Y3M2 126 aa7.55□□□□□ -1.2
SEMA4D-224ENST00000544513 HINT1P49773 126 aaPredicted RBP7.54□□□□□ -1.2
SEMA4D-224ENST00000544513 PCOTHQ58A44 107 aa7.54□□□□□ -1.2
SEMA4D-224ENST00000544513 LIMD2Q9BT23 127 aa7.54□□□□□ -1.2
SEMA4D-224ENST00000544513 DHRS4-AS1Q9P1J3 65 aa7.54□□□□□ -1.2
SEMA4D-224ENST00000544513 SLC25A34Q6PIV7 304 aa7.53□□□□□ -1.2
SEMA4D-224ENST00000544513 LINC00308Q8TCZ7 52 aa7.53□□□□□ -1.2
SEMA4D-224ENST00000544513 SPANXCQ9NY87 97 aa7.53□□□□□ -1.2
SEMA4D-224ENST00000544513 PYY3Q5JQD4 70 aa7.52□□□□□ -1.21
SEMA4D-224ENST00000544513 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
SEMA4D-224ENST00000544513 TIMM17BO60830 172 aa7.51□□□□□ -1.21
SEMA4D-224ENST00000544513 VAMP8Q9BV40 100 aa7.51□□□□□ -1.21
SEMA4D-224ENST00000544513 LOC105371267A0A1B0GV96 52 aa7.5□□□□□ -1.21
SEMA4D-224ENST00000544513 C9orf92A6NGG3 77 aa7.5□□□□□ -1.21
SEMA4D-224ENST00000544513 CD164Q04900 197 aa7.5□□□□□ -1.21
SEMA4D-224ENST00000544513 HRCT1Q6UXD1 115 aa7.5□□□□□ -1.21
SEMA4D-224ENST00000544513 SPANXDQ9BXN6 97 aa7.5□□□□□ -1.21
SEMA4D-224ENST00000544513 LAMTOR3Q9UHA4 124 aa7.5□□□□□ -1.21
SEMA4D-224ENST00000544513 FLGP20930 4061 aaPredicted RBP7.5□□□□□ -1.21
SEMA4D-224ENST00000544513 ELOF1P60002 83 aaKnown RBP7.49□□□□□ -1.21
SEMA4D-224ENST00000544513 CFC1BP0CG36 223 aa7.48□□□□□ -1.21
SEMA4D-224ENST00000544513 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
SEMA4D-224ENST00000544513 ANKRD39Q53RE8 183 aa7.48□□□□□ -1.21
SEMA4D-224ENST00000544513 Q5XG85 94 aa7.48□□□□□ -1.21
SEMA4D-224ENST00000544513 OR13C6PQ8NH95 151 aa7.48□□□□□ -1.21
SEMA4D-224ENST00000544513 SPATA45Q537H7 98 aa7.47□□□□□ -1.21
SEMA4D-224ENST00000544513 PAM16Q9Y3D7 125 aa7.47□□□□□ -1.21
SEMA4D-224ENST00000544513 ZNF815PA8K554 130 aa7.46□□□□□ -1.22
SEMA4D-224ENST00000544513 LORP23490 312 aaPredicted RBP7.46□□□□□ -1.22
SEMA4D-224ENST00000544513 COX7BP24311 80 aa7.46□□□□□ -1.22
SEMA4D-224ENST00000544513 C6orf99Q4VX62 202 aa7.45□□□□□ -1.22
SEMA4D-224ENST00000544513 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
SEMA4D-224ENST00000544513 PRO1933Q9H354 126 aa7.45□□□□□ -1.22
SEMA4D-224ENST00000544513 TRBV7-6A0A0J9YX20 115 aa7.44□□□□□ -1.22
SEMA4D-224ENST00000544513 TEX49A0A1B0GTD5 131 aa7.44□□□□□ -1.22
SEMA4D-224ENST00000544513 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
SEMA4D-224ENST00000544513 Q1RN00 199 aa7.44□□□□□ -1.22
SEMA4D-224ENST00000544513 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
SEMA4D-224ENST00000544513 TAL2Q16559 108 aa7.43□□□□□ -1.22
SEMA4D-224ENST00000544513 C1orf195Q5TG92 126 aa7.43□□□□□ -1.22
SEMA4D-224ENST00000544513 SCGB1D4Q6XE38 83 aa7.43□□□□□ -1.22
SEMA4D-224ENST00000544513 H7C2G1 150 aa7.42□□□□□ -1.22
SEMA4D-224ENST00000544513 COX8AP10176 69 aa7.42□□□□□ -1.22
SEMA4D-224ENST00000544513 PCP2Q8IVA1 136 aa7.42□□□□□ -1.22
SEMA4D-224ENST00000544513 DEFB105AQ8NG35 78 aa7.42□□□□□ -1.22
SEMA4D-224ENST00000544513 IGLV5-48A0A075B6I7 105 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms