RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 ZNF73O43830 326 aaPredicted RBP10.36□□□□□ -0.75
LTBR-211ENST00000543190 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
LTBR-211ENST00000543190 S100A7L2Q5SY68 101 aa10.36□□□□□ -0.75
LTBR-211ENST00000543190 KRTAP9-6A0A140TA67 174 aa10.35□□□□□ -0.75
LTBR-211ENST00000543190 SOSTDC1Q6X4U4 206 aa10.35□□□□□ -0.75
LTBR-211ENST00000543190 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
LTBR-211ENST00000543190 E9PLD3 99 aa10.34□□□□□ -0.75
LTBR-211ENST00000543190 SPRR1BP22528 89 aa10.34□□□□□ -0.75
LTBR-211ENST00000543190 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
LTBR-211ENST00000543190 ADAMTSL4-AS1Q5T5F5 129 aa10.33□□□□□ -0.76
LTBR-211ENST00000543190 LINC01547P58512 204 aaPredicted RBP10.32□□□□□ -0.76
LTBR-211ENST00000543190 TIMM17BO60830 172 aa10.3□□□□□ -0.76
LTBR-211ENST00000543190 LITAFQ99732 161 aa10.3□□□□□ -0.76
LTBR-211ENST00000543190 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
LTBR-211ENST00000543190 FABP4P15090 132 aa10.29□□□□□ -0.76
LTBR-211ENST00000543190 PMCHL2Q9BQD1 86 aa10.29□□□□□ -0.76
LTBR-211ENST00000543190 HINT1P49773 126 aaPredicted RBP10.28□□□□□ -0.76
LTBR-211ENST00000543190 SLC25A34Q6PIV7 304 aa10.28□□□□□ -0.76
LTBR-211ENST00000543190 COLCA2A8K830 154 aa10.27□□□□□ -0.77
LTBR-211ENST00000543190 LCE2DQ5TA82 110 aaPredicted RBP10.27□□□□□ -0.77
LTBR-211ENST00000543190 DHRS4-AS1Q9P1J3 65 aa10.27□□□□□ -0.77
LTBR-211ENST00000543190 C9orf153Q5TBE3 101 aa10.26□□□□□ -0.77
LTBR-211ENST00000543190 ST20-AS1Q8NBB2 130 aa10.26□□□□□ -0.77
LTBR-211ENST00000543190 LINC00308Q8TCZ7 52 aa10.25□□□□□ -0.77
LTBR-211ENST00000543190 LIMD2Q9BT23 127 aa10.25□□□□□ -0.77
LTBR-211ENST00000543190 SPANXDQ9BXN6 97 aa10.24□□□□□ -0.77
LTBR-211ENST00000543190 SYS1-DBNDD2H3BUS1 97 aa10.23□□□□□ -0.77
LTBR-211ENST00000543190 CD164Q04900 197 aa10.23□□□□□ -0.77
LTBR-211ENST00000543190 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
LTBR-211ENST00000543190 ELOF1P60002 83 aaKnown RBP10.22□□□□□ -0.77
LTBR-211ENST00000543190 LINC01545Q5VT33 79 aa10.22□□□□□ -0.77
LTBR-211ENST00000543190 LINC00518Q8N0U6 118 aa10.22□□□□□ -0.77
LTBR-211ENST00000543190 NPC2P61916 151 aa10.21□□□□□ -0.77
LTBR-211ENST00000543190 TRBV7-6A0A0J9YX20 115 aa10.2□□□□□ -0.78
LTBR-211ENST00000543190 KRTAP19-2Q3LHN2 52 aa10.2□□□□□ -0.78
LTBR-211ENST00000543190 Q5XG85 94 aa10.2□□□□□ -0.78
LTBR-211ENST00000543190 LAMTOR3Q9UHA4 124 aa10.19□□□□□ -0.78
LTBR-211ENST00000543190 PET117Q6UWS5 81 aa10.17□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BKO60814 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BJP06899 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BOP23527 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BBP33778 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BDP58876 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BCP62807 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST2H2BEQ16778 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.16□□□□□ -0.78
LTBR-211ENST00000543190 OR13C6PQ8NH95 151 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BHQ93079 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BNQ99877 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 HIST1H2BMQ99879 126 aa10.16□□□□□ -0.78
LTBR-211ENST00000543190 COX7BP24311 80 aa10.14□□□□□ -0.79
LTBR-211ENST00000543190 ZNF815PA8K554 130 aa10.13□□□□□ -0.79
LTBR-211ENST00000543190 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
LTBR-211ENST00000543190 TEX49A0A1B0GTD5 131 aa10.12□□□□□ -0.79
LTBR-211ENST00000543190 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
LTBR-211ENST00000543190 IGLV5-48A0A075B6I7 105 aa10.11□□□□□ -0.79
LTBR-211ENST00000543190 Q6ZVH6 145 aa10.1□□□□□ -0.79
LTBR-211ENST00000543190 COPS9Q8WXC6 57 aa10.1□□□□□ -0.79
LTBR-211ENST00000543190 A0A1B0GWB2 263 aa10.09□□□□□ -0.79
LTBR-211ENST00000543190 IFITM1P13164 125 aa10.09□□□□□ -0.79
LTBR-211ENST00000543190 PCOTHQ58A44 107 aa10.09□□□□□ -0.79
LTBR-211ENST00000543190 COA6Q5JTJ3 125 aaKnown RBP10.09□□□□□ -0.79
LTBR-211ENST00000543190 SMIM29Q86T20 159 aa10.09□□□□□ -0.79
LTBR-211ENST00000543190 MT1HP80294 61 aa10.08□□□□□ -0.8
LTBR-211ENST00000543190 TAL2Q16559 108 aa10.08□□□□□ -0.8
LTBR-211ENST00000543190 SLC7A5P1Q8MH63 180 aa10.08□□□□□ -0.8
LTBR-211ENST00000543190 A4D1N5 150 aa10.07□□□□□ -0.8
LTBR-211ENST00000543190 AKR1D1P51857 326 aa10.07□□□□□ -0.8
LTBR-211ENST00000543190 TTTY13Q9BZ97 58 aa10.07□□□□□ -0.8
LTBR-211ENST00000543190 H7C2G1 150 aa10.06□□□□□ -0.8
LTBR-211ENST00000543190 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
LTBR-211ENST00000543190 CFC1BP0CG36 223 aa10.06□□□□□ -0.8
LTBR-211ENST00000543190 Q1RN00 199 aa10.05□□□□□ -0.8
LTBR-211ENST00000543190 HRCT1Q6UXD1 115 aa10.05□□□□□ -0.8
LTBR-211ENST00000543190 IGLV8-61A0A075B6I0 122 aa10.04□□□□□ -0.8
LTBR-211ENST00000543190 C1orf195Q5TG92 126 aa10.04□□□□□ -0.8
LTBR-211ENST00000543190 C9orf92A6NGG3 77 aa10.02□□□□□ -0.81
LTBR-211ENST00000543190 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
LTBR-211ENST00000543190 CRCT1Q9UGL9 99 aa10.02□□□□□ -0.81
LTBR-211ENST00000543190 DEFB105AQ8NG35 78 aa10□□□□□ -0.81
LTBR-211ENST00000543190 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
LTBR-211ENST00000543190 S100A1P23297 94 aa9.99□□□□□ -0.81
LTBR-211ENST00000543190 RPL37P61927 97 aaKnown RBP9.98□□□□□ -0.81
LTBR-211ENST00000543190 LORP23490 312 aaPredicted RBP9.97□□□□□ -0.81
LTBR-211ENST00000543190 ANKRD39Q53RE8 183 aa9.97□□□□□ -0.81
LTBR-211ENST00000543190 TRAV13-2A0A0B4J235 113 aa9.96□□□□□ -0.82
LTBR-211ENST00000543190 C20orf202A1L168 122 aa9.96□□□□□ -0.82
LTBR-211ENST00000543190 A6NDN8 102 aa9.95□□□□□ -0.82
LTBR-211ENST00000543190 KRTDAPP60985 99 aa9.95□□□□□ -0.82
LTBR-211ENST00000543190 SNRPEP62304 92 aaKnown RBP9.94□□□□□ -0.82
LTBR-211ENST00000543190 MUSTN1Q8IVN3 82 aa9.94□□□□□ -0.82
LTBR-211ENST00000543190 TCL1BO95988 128 aa9.93□□□□□ -0.82
LTBR-211ENST00000543190 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
LTBR-211ENST00000543190 KRTAP10-6P60371 365 aaPredicted RBP9.92□□□□□ -0.82
LTBR-211ENST00000543190 PCP2Q8IVA1 136 aa9.92□□□□□ -0.82
LTBR-211ENST00000543190 FLGP20930 4061 aaPredicted RBP9.9□□□□□ -0.83
LTBR-211ENST00000543190 A0A0G2JQZ4 141 aa9.88□□□□□ -0.83
LTBR-211ENST00000543190 Q6JHZ5 121 aa9.88□□□□□ -0.83
LTBR-211ENST00000543190 FSIP2Q5CZC0 6907 aa9.88□□□□□ -0.83
LTBR-211ENST00000543190 LINC00575Q6W349 94 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms