RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 LINC00643Q86TS7 51 aa9.07□□□□□ -0.96
LDB3-207ENST00000542786 LRCOL1A6NCL2 159 aa9.06□□□□□ -0.96
LDB3-207ENST00000542786 PRYO14603 147 aa9.05□□□□□ -0.96
LDB3-207ENST00000542786 LINC00846Q9NV44 126 aa9.05□□□□□ -0.96
LDB3-207ENST00000542786 LYSTQ99698 3801 aa9.05□□□□□ -0.96
LDB3-207ENST00000542786 LOC110117498A0A087WWA1 95 aa9.04□□□□□ -0.96
LDB3-207ENST00000542786 DNAH7Q8WXX0 4024 aa9.04□□□□□ -0.96
LDB3-207ENST00000542786 TENM2Q9NT68 2774 aa9.04□□□□□ -0.96
LDB3-207ENST00000542786 A0A096LNI7 61 aa9.04□□□□□ -0.96
LDB3-207ENST00000542786 PSCAO43653 123 aa9.04□□□□□ -0.96
LDB3-207ENST00000542786 PLECQ15149 4684 aaKnown RBP9.04□□□□□ -0.96
LDB3-207ENST00000542786 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
LDB3-207ENST00000542786 C16orf90A8MZG2 172 aa9.03□□□□□ -0.96
LDB3-207ENST00000542786 Q6ZQT0 140 aa9.03□□□□□ -0.96
LDB3-207ENST00000542786 FAM19A5Q7Z5A7 132 aaPredicted RBP9.03□□□□□ -0.96
LDB3-207ENST00000542786 DNAH10Q8IVF4 4471 aa9.03□□□□□ -0.96
LDB3-207ENST00000542786 C14orf177Q52M58 125 aa9.02□□□□□ -0.96
LDB3-207ENST00000542786 MRPL55Q7Z7F7 128 aaKnown RBP9.02□□□□□ -0.96
LDB3-207ENST00000542786 B5MCH6 92 aa9.02□□□□□ -0.97
LDB3-207ENST00000542786 RBM3P98179 157 aaKnown RBP9.02□□□□□ -0.97
LDB3-207ENST00000542786 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
LDB3-207ENST00000542786 Q6ZRX8 168 aa9.01□□□□□ -0.97
LDB3-207ENST00000542786 Q9BRP9 147 aa9□□□□□ -0.97
LDB3-207ENST00000542786 IMUPQ9GZP8 106 aa9□□□□□ -0.97
LDB3-207ENST00000542786 LAMTOR3Q9UHA4 124 aa9□□□□□ -0.97
LDB3-207ENST00000542786 A0A1W2PNN7 141 aa9□□□□□ -0.97
LDB3-207ENST00000542786 TRBV7-4A0A0J9YYF1 115 aa8.99□□□□□ -0.97
LDB3-207ENST00000542786 LINC01547P58512 204 aaPredicted RBP8.99□□□□□ -0.97
LDB3-207ENST00000542786 STARD9Q9P2P6 4700 aa8.98□□□□□ -0.97
LDB3-207ENST00000542786 M0R2N4 97 aa8.98□□□□□ -0.97
LDB3-207ENST00000542786 Q6JHZ5 121 aa8.98□□□□□ -0.97
LDB3-207ENST00000542786 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.98□□□□□ -0.97
LDB3-207ENST00000542786 GHRHP01286 108 aa8.98□□□□□ -0.97
LDB3-207ENST00000542786 NDUFV3P56181 108 aaKnown RBP8.98□□□□□ -0.97
LDB3-207ENST00000542786 C9orf163Q8N9P6 203 aa8.97□□□□□ -0.97
LDB3-207ENST00000542786 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
LDB3-207ENST00000542786 IGKV2-24A0A0C4DH68 120 aa8.96□□□□□ -0.98
LDB3-207ENST00000542786 Q8N377 158 aa8.96□□□□□ -0.98
LDB3-207ENST00000542786 ETDCA0A1B0GVM5 59 aa8.95□□□□□ -0.98
LDB3-207ENST00000542786 PDE6GP18545 87 aa8.95□□□□□ -0.98
LDB3-207ENST00000542786 Q6ZR54 194 aa8.95□□□□□ -0.98
LDB3-207ENST00000542786 CHTF8P0CG12 524 aa8.94□□□□□ -0.98
LDB3-207ENST00000542786 REG3GQ6UW15 175 aa8.94□□□□□ -0.98
LDB3-207ENST00000542786 DSCR8Q96T75 97 aa8.94□□□□□ -0.98
LDB3-207ENST00000542786 IGLV5-48A0A075B6I7 105 aa8.94□□□□□ -0.98
LDB3-207ENST00000542786 ERC2-IT1O76042 136 aa8.93□□□□□ -0.98
LDB3-207ENST00000542786 FBN3Q75N90 2809 aa8.93□□□□□ -0.98
LDB3-207ENST00000542786 KRTAP11-1Q8IUC1 163 aa8.91□□□□□ -0.98
LDB3-207ENST00000542786 IGKV3D-7A0A0C4DH55 119 aa8.91□□□□□ -0.98
LDB3-207ENST00000542786 ANAPC13Q9BS18 74 aa8.91□□□□□ -0.98
LDB3-207ENST00000542786 HIST1H4AP62805 103 aaKnown RBP8.9□□□□□ -0.98
LDB3-207ENST00000542786 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.98
LDB3-207ENST00000542786 A0A087WTM6 91 aa8.89□□□□□ -0.99
LDB3-207ENST00000542786 PANO1I0J062 215 aa8.89□□□□□ -0.99
LDB3-207ENST00000542786 TNP2Q05952 138 aa8.89□□□□□ -0.99
LDB3-207ENST00000542786 FAM236AA0A1B0GUQ0 79 aa8.88□□□□□ -0.99
LDB3-207ENST00000542786 FAM236BA0A1B0GV22 79 aa8.88□□□□□ -0.99
LDB3-207ENST00000542786 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
LDB3-207ENST00000542786 ATP5EP2Q5VTU8 51 aa8.88□□□□□ -0.99
LDB3-207ENST00000542786 DEFB105AQ8NG35 78 aa8.88□□□□□ -0.99
LDB3-207ENST00000542786 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
LDB3-207ENST00000542786 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
LDB3-207ENST00000542786 UBL5Q9BZL1 73 aa8.87□□□□□ -0.99
LDB3-207ENST00000542786 UBE2BP63146 152 aa8.86□□□□□ -0.99
LDB3-207ENST00000542786 Q6ZVQ6 151 aa8.85□□□□□ -0.99
LDB3-207ENST00000542786 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
LDB3-207ENST00000542786 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
LDB3-207ENST00000542786 LINC00474Q9P2X8 69 aa8.85□□□□□ -0.99
LDB3-207ENST00000542786 SPACA4Q8TDM5 124 aa8.84□□□□□ -0.99
LDB3-207ENST00000542786 PRLHP81277 87 aa8.83□□□□□ -1
LDB3-207ENST00000542786 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
LDB3-207ENST00000542786 FAM19A1Q7Z5A9 133 aa8.83□□□□□ -1
LDB3-207ENST00000542786 H0Y9J4 135 aa8.82□□□□□ -1
LDB3-207ENST00000542786 A0A087WVE0 104 aa8.81□□□□□ -1
LDB3-207ENST00000542786 A0A1W2PNM2 257 aa8.79□□□□□ -1
LDB3-207ENST00000542786 KRTAP13-1Q8IUC0 172 aa8.79□□□□□ -1
LDB3-207ENST00000542786 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
LDB3-207ENST00000542786 DNAH17Q9UFH2 4485 aa8.79□□□□□ -1
LDB3-207ENST00000542786 CCDC179H3BU77 68 aa8.79□□□□□ -1
LDB3-207ENST00000542786 RTL8CO15255 209 aa8.79□□□□□ -1
LDB3-207ENST00000542786 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -1
LDB3-207ENST00000542786 CXCL6P80162 114 aa8.78□□□□□ -1
LDB3-207ENST00000542786 C1orf137Q5JT78 98 aa8.77□□□□□ -1.01
LDB3-207ENST00000542786 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
LDB3-207ENST00000542786 LINC00476Q8WZB0 136 aa8.77□□□□□ -1.01
LDB3-207ENST00000542786 DNAH2Q9P225 4427 aa8.76□□□□□ -1.01
LDB3-207ENST00000542786 KMT2AQ03164 3969 aa8.76□□□□□ -1.01
LDB3-207ENST00000542786 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
LDB3-207ENST00000542786 SPRR1BP22528 89 aa8.76□□□□□ -1.01
LDB3-207ENST00000542786 Q8NBF4 154 aa8.76□□□□□ -1.01
LDB3-207ENST00000542786 HIGD2AQ9BW72 106 aa8.76□□□□□ -1.01
LDB3-207ENST00000542786 BCE1O60756 84 aa8.75□□□□□ -1.01
LDB3-207ENST00000542786 WWC2-AS2Q96NR7 200 aa8.75□□□□□ -1.01
LDB3-207ENST00000542786 A0A1B0GW54 56 aa8.74□□□□□ -1.01
LDB3-207ENST00000542786 ATOX1O00244 68 aa8.74□□□□□ -1.01
LDB3-207ENST00000542786 HAMPP81172 84 aa8.74□□□□□ -1.01
LDB3-207ENST00000542786 LY6G6CO95867 125 aa8.74□□□□□ -1.01
LDB3-207ENST00000542786 SPRR4Q96PI1 79 aa8.74□□□□□ -1.01
LDB3-207ENST00000542786 ALMS1Q8TCU4 4167 aa8.73□□□□□ -1.01
LDB3-207ENST00000542786 HECTD4Q9Y4D8 3996 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms