RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 RPL37AP8A6NKH3 93 aa6.81□□□□□ -1.32
CDC42SE1-207ENST00000540998 MIFP14174 115 aa6.81□□□□□ -1.32
CDC42SE1-207ENST00000540998 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
CDC42SE1-207ENST00000540998 LYSTQ99698 3801 aa6.81□□□□□ -1.32
CDC42SE1-207ENST00000540998 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
CDC42SE1-207ENST00000540998 KRTAP26-1Q6PEX3 210 aa6.81□□□□□ -1.32
CDC42SE1-207ENST00000540998 TENM2Q9NT68 2774 aa6.8□□□□□ -1.32
CDC42SE1-207ENST00000540998 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
CDC42SE1-207ENST00000540998 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
CDC42SE1-207ENST00000540998 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
CDC42SE1-207ENST00000540998 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
CDC42SE1-207ENST00000540998 GVQW2A0A096LPI5 108 aaPredicted RBP6.79□□□□□ -1.32
CDC42SE1-207ENST00000540998 NREPQ16612 68 aa6.79□□□□□ -1.32
CDC42SE1-207ENST00000540998 ESRGQ1W209 222 aa6.79□□□□□ -1.32
CDC42SE1-207ENST00000540998 CXCL6P80162 114 aa6.79□□□□□ -1.32
CDC42SE1-207ENST00000540998 COL7A1Q02388 2944 aa6.79□□□□□ -1.32
CDC42SE1-207ENST00000540998 KLKP1Q107X0 134 aa6.78□□□□□ -1.32
CDC42SE1-207ENST00000540998 CASC10Q5T4H9 136 aa6.78□□□□□ -1.32
CDC42SE1-207ENST00000540998 NDUFC2-KCTD14E9PQ53 114 aa6.77□□□□□ -1.32
CDC42SE1-207ENST00000540998 M0R378 163 aa6.77□□□□□ -1.32
CDC42SE1-207ENST00000540998 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.32
CDC42SE1-207ENST00000540998 ST20-AS1Q8NBB2 130 aa6.77□□□□□ -1.32
CDC42SE1-207ENST00000540998 DNAH10Q8IVF4 4471 aa6.77□□□□□ -1.32
CDC42SE1-207ENST00000540998 IGKV4-1P06312 121 aa6.77□□□□□ -1.33
CDC42SE1-207ENST00000540998 FAM229BQ4G0N7 80 aa6.77□□□□□ -1.33
CDC42SE1-207ENST00000540998 LINC00336Q6ZUF6 198 aa6.76□□□□□ -1.33
CDC42SE1-207ENST00000540998 EGFEM1PQ0D2K5 195 aa6.75□□□□□ -1.33
CDC42SE1-207ENST00000540998 Q8N377 158 aa6.75□□□□□ -1.33
CDC42SE1-207ENST00000540998 C7orf33Q8WU49 177 aa6.75□□□□□ -1.33
CDC42SE1-207ENST00000540998 TMEM254Q8TBM7 123 aa6.75□□□□□ -1.33
CDC42SE1-207ENST00000540998 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
CDC42SE1-207ENST00000540998 PDE6GP18545 87 aa6.75□□□□□ -1.33
CDC42SE1-207ENST00000540998 HIGD2AQ9BW72 106 aa6.75□□□□□ -1.33
CDC42SE1-207ENST00000540998 TRBV7-6A0A0J9YX20 115 aa6.74□□□□□ -1.33
CDC42SE1-207ENST00000540998 FAM30AQ9NZY2 134 aa6.74□□□□□ -1.33
CDC42SE1-207ENST00000540998 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
CDC42SE1-207ENST00000540998 KRTAP10-11P60412 298 aa6.74□□□□□ -1.33
CDC42SE1-207ENST00000540998 NKAPP1Q8N9T2 125 aa6.73□□□□□ -1.33
CDC42SE1-207ENST00000540998 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
CDC42SE1-207ENST00000540998 STAB2Q8WWQ8 2551 aa6.73□□□□□ -1.33
CDC42SE1-207ENST00000540998 SYCNQ0VAF6 134 aa6.73□□□□□ -1.33
CDC42SE1-207ENST00000540998 PRB2P02812 416 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE1-207ENST00000540998 LRCOL1A6NCL2 159 aa6.72□□□□□ -1.33
CDC42SE1-207ENST00000540998 ERC2-IT1O76042 136 aa6.72□□□□□ -1.33
CDC42SE1-207ENST00000540998 Q9BRP9 147 aa6.72□□□□□ -1.33
CDC42SE1-207ENST00000540998 DEFB116Q30KQ4 102 aa6.72□□□□□ -1.33
CDC42SE1-207ENST00000540998 SMIM29Q86T20 159 aa6.72□□□□□ -1.33
CDC42SE1-207ENST00000540998 MGAM2Q2M2H8 2515 aa6.71□□□□□ -1.33
CDC42SE1-207ENST00000540998 A0A1W2PNM2 257 aa6.71□□□□□ -1.34
CDC42SE1-207ENST00000540998 EPM2AB3EWF7 344 aa6.71□□□□□ -1.34
CDC42SE1-207ENST00000540998 CMYA5Q8N3K9 4069 aa6.71□□□□□ -1.34
CDC42SE1-207ENST00000540998 J3QKU1 62 aa6.7□□□□□ -1.34
CDC42SE1-207ENST00000540998 KRTAP7-1Q8IUC3 87 aa6.7□□□□□ -1.34
CDC42SE1-207ENST00000540998 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
CDC42SE1-207ENST00000540998 DEFB131BA0A096LNP1 70 aa6.69□□□□□ -1.34
CDC42SE1-207ENST00000540998 PRR4Q16378 134 aa6.69□□□□□ -1.34
CDC42SE1-207ENST00000540998 KCNQ1DNQ9H478 68 aa6.67□□□□□ -1.34
CDC42SE1-207ENST00000540998 PRYO14603 147 aa6.67□□□□□ -1.34
CDC42SE1-207ENST00000540998 BCE1O60756 84 aa6.67□□□□□ -1.34
CDC42SE1-207ENST00000540998 C1orf137Q5JT78 98 aa6.67□□□□□ -1.34
CDC42SE1-207ENST00000540998 A0A0U1RQV1 116 aa6.66□□□□□ -1.34
CDC42SE1-207ENST00000540998 K7EQZ3 153 aa6.66□□□□□ -1.34
CDC42SE1-207ENST00000540998 Q6ZRX8 168 aa6.66□□□□□ -1.34
CDC42SE1-207ENST00000540998 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
CDC42SE1-207ENST00000540998 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.34
CDC42SE1-207ENST00000540998 H3BQ85 93 aa6.65□□□□□ -1.34
CDC42SE1-207ENST00000540998 PKIGQ9Y2B9 76 aa6.65□□□□□ -1.34
CDC42SE1-207ENST00000540998 DNAH1Q9P2D7 4330 aa6.65□□□□□ -1.35
CDC42SE1-207ENST00000540998 UBE2BP63146 152 aa6.65□□□□□ -1.35
CDC42SE1-207ENST00000540998 LINC01556Q5JQF7 62 aa6.64□□□□□ -1.35
CDC42SE1-207ENST00000540998 FUSP35637 526 aaKnown RBP eCLIP6.64□□□□□ -1.351e-7■■■□□ 14.6
CDC42SE1-207ENST00000540998 C11orf45Q8TAV5 145 aa6.64□□□□□ -1.35
CDC42SE1-207ENST00000540998 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
CDC42SE1-207ENST00000540998 BRK1Q8WUW1 75 aa6.63□□□□□ -1.35
CDC42SE1-207ENST00000540998 KRTAP4-16G5E9R7 235 aaPredicted RBP6.63□□□□□ -1.35
CDC42SE1-207ENST00000540998 WIPF1O43516 503 aa6.63□□□□□ -1.35
CDC42SE1-207ENST00000540998 DSCR10P59022 87 aa6.63□□□□□ -1.35
CDC42SE1-207ENST00000540998 DNAH9Q9NYC9 4486 aa6.63□□□□□ -1.35
CDC42SE1-207ENST00000540998 IGLV1-50A0A075B6I6 118 aa6.62□□□□□ -1.35
CDC42SE1-207ENST00000540998 IGKV2-24A0A0C4DH68 120 aa6.62□□□□□ -1.35
CDC42SE1-207ENST00000540998 PRLHP81277 87 aa6.62□□□□□ -1.35
CDC42SE1-207ENST00000540998 MRAPQ8TCY5 172 aa6.62□□□□□ -1.35
CDC42SE1-207ENST00000540998 LINC00588Q9Y4M8 146 aa6.61□□□□□ -1.35
CDC42SE1-207ENST00000540998 NDUFC1O43677 76 aa6.61□□□□□ -1.35
CDC42SE1-207ENST00000540998 TNP2Q05952 138 aa6.61□□□□□ -1.35
CDC42SE1-207ENST00000540998 RPL37AP61513 92 aaKnown RBP6.6□□□□□ -1.35
CDC42SE1-207ENST00000540998 Q8NBF4 154 aa6.6□□□□□ -1.35
CDC42SE1-207ENST00000540998 WFDC13Q8IUB5 93 aa6.6□□□□□ -1.35
CDC42SE1-207ENST00000540998 HUWE1Q7Z6Z7 4374 aaKnown RBP6.59□□□□□ -1.35
CDC42SE1-207ENST00000540998 MRPL55Q7Z7F7 128 aaKnown RBP6.59□□□□□ -1.35
CDC42SE1-207ENST00000540998 H3BNG1 76 aa6.59□□□□□ -1.36
CDC42SE1-207ENST00000540998 LINC00476Q8WZB0 136 aa6.59□□□□□ -1.36
CDC42SE1-207ENST00000540998 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
CDC42SE1-207ENST00000540998 DNAH7Q8WXX0 4024 aa6.58□□□□□ -1.36
CDC42SE1-207ENST00000540998 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
CDC42SE1-207ENST00000540998 A0A096LNI7 61 aa6.57□□□□□ -1.36
CDC42SE1-207ENST00000540998 DNAH10OSP0CZ25 163 aa6.57□□□□□ -1.36
CDC42SE1-207ENST00000540998 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE1-207ENST00000540998 SPRR1AP35321 89 aa6.56□□□□□ -1.36
CDC42SE1-207ENST00000540998 A0A087WSZ3 146 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms