RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 IGKCP01834 107 aa14.72□□□□□ -0.05
CHFR-218ENST00000540963 SOSTDC1Q6X4U4 206 aa14.71□□□□□ -0.05
CHFR-218ENST00000540963 ADAMTSL4-AS1Q5T5F5 129 aa14.7□□□□□ -0.06
CHFR-218ENST00000540963 TRBV10-2A0A0K0K1G8 114 aa14.68□□□□□ -0.06
CHFR-218ENST00000540963 Q6ZRX8 168 aa14.68□□□□□ -0.06
CHFR-218ENST00000540963 Q9BRP9 147 aa14.68□□□□□ -0.06
CHFR-218ENST00000540963 DDTP30046 118 aa14.67□□□□□ -0.06
CHFR-218ENST00000540963 NMUP48645 174 aa14.67□□□□□ -0.06
CHFR-218ENST00000540963 A0A0J9YXY3 114 aa14.65□□□□□ -0.06
CHFR-218ENST00000540963 IGLV6-57P01721 117 aa14.65□□□□□ -0.06
CHFR-218ENST00000540963 LGALS3P17931 250 aaKnown RBP14.65□□□□□ -0.06
CHFR-218ENST00000540963 HERVK_113P61574 105 aa14.65□□□□□ -0.06
CHFR-218ENST00000540963 E9PLD3 99 aa14.63□□□□□ -0.07
CHFR-218ENST00000540963 SPANXB1Q9NS25 103 aaPredicted RBP14.63□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BKO60814 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 NDUFC2O95298 119 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BJP06899 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 LORP23490 312 aaPredicted RBP14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BOP23527 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BBP33778 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BDP58876 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BCP62807 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST2H2BEQ16778 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.62□□□□□ -0.07
CHFR-218ENST00000540963 C9orf153Q5TBE3 101 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BHQ93079 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BNQ99877 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 HIST1H2BMQ99879 126 aa14.62□□□□□ -0.07
CHFR-218ENST00000540963 IGLV8-61A0A075B6I0 122 aa14.61□□□□□ -0.07
CHFR-218ENST00000540963 NPC2P61916 151 aa14.61□□□□□ -0.07
CHFR-218ENST00000540963 PCOTHQ58A44 107 aa14.61□□□□□ -0.07
CHFR-218ENST00000540963 SYS1-DBNDD2H3BUS1 97 aa14.6□□□□□ -0.07
CHFR-218ENST00000540963 JOSD1Q15040 202 aaPredicted RBP14.6□□□□□ -0.07
CHFR-218ENST00000540963 LITAFQ99732 161 aa14.6□□□□□ -0.07
CHFR-218ENST00000540963 C5orf52A6NGY3 159 aa14.57□□□□□ -0.08
CHFR-218ENST00000540963 KRTAP10-6P60371 365 aaPredicted RBP14.57□□□□□ -0.08
CHFR-218ENST00000540963 LIMD2Q9BT23 127 aa14.56□□□□□ -0.08
CHFR-218ENST00000540963 LINC01545Q5VT33 79 aa14.54□□□□□ -0.08
CHFR-218ENST00000540963 MIEN1Q9BRT3 115 aa14.54□□□□□ -0.08
CHFR-218ENST00000540963 TRAV23DV6A0A075B6W5 121 aa14.53□□□□□ -0.08
CHFR-218ENST00000540963 S100A7L2Q5SY68 101 aa14.53□□□□□ -0.08
CHFR-218ENST00000540963 TTTY13Q9BZ97 58 aa14.52□□□□□ -0.09
CHFR-218ENST00000540963 ZNF73O43830 326 aaPredicted RBP14.5□□□□□ -0.09
CHFR-218ENST00000540963 ST20-AS1Q8NBB2 130 aa14.5□□□□□ -0.09
CHFR-218ENST00000540963 LINC00308Q8TCZ7 52 aa14.5□□□□□ -0.09
CHFR-218ENST00000540963 PET117Q6UWS5 81 aa14.47□□□□□ -0.09
CHFR-218ENST00000540963 C9orf92A6NGG3 77 aa14.46□□□□□ -0.09
CHFR-218ENST00000540963 C3orf79P0CE67 100 aa14.46□□□□□ -0.09
CHFR-218ENST00000540963 SLC25A34Q6PIV7 304 aa14.46□□□□□ -0.09
CHFR-218ENST00000540963 TIMM17BO60830 172 aa14.45□□□□□ -0.1
CHFR-218ENST00000540963 SPRR1BP22528 89 aa14.44□□□□□ -0.1
CHFR-218ENST00000540963 COA6Q5JTJ3 125 aaKnown RBP14.43□□□□□ -0.1
CHFR-218ENST00000540963 SPANXCQ9NY87 97 aa14.43□□□□□ -0.1
CHFR-218ENST00000540963 CBY1Q9Y3M2 126 aa14.43□□□□□ -0.1
CHFR-218ENST00000540963 M0R2T5 61 aa14.41□□□□□ -0.1
CHFR-218ENST00000540963 HINT1P49773 126 aaPredicted RBP14.41□□□□□ -0.1
CHFR-218ENST00000540963 ZNF815PA8K554 130 aa14.4□□□□□ -0.1
CHFR-218ENST00000540963 CD164Q04900 197 aa14.37□□□□□ -0.11
CHFR-218ENST00000540963 HRCT1Q6UXD1 115 aa14.37□□□□□ -0.11
CHFR-218ENST00000540963 OR13C6PQ8NH95 151 aa14.36□□□□□ -0.11
CHFR-218ENST00000540963 ANKRD39Q53RE8 183 aa14.35□□□□□ -0.11
CHFR-218ENST00000540963 LAMTOR3Q9UHA4 124 aa14.35□□□□□ -0.11
CHFR-218ENST00000540963 SPANXDQ9BXN6 97 aa14.34□□□□□ -0.11
CHFR-218ENST00000540963 FLGP20930 4061 aaPredicted RBP14.34□□□□□ -0.11
CHFR-218ENST00000540963 KRTDAPP60985 99 aa14.33□□□□□ -0.12
CHFR-218ENST00000540963 DHRS4-AS1Q9P1J3 65 aa14.33□□□□□ -0.12
CHFR-218ENST00000540963 Q5XG85 94 aa14.31□□□□□ -0.12
CHFR-218ENST00000540963 COX6B2Q6YFQ2 88 aa14.31□□□□□ -0.12
CHFR-218ENST00000540963 ELOF1P60002 83 aaKnown RBP14.29□□□□□ -0.12
CHFR-218ENST00000540963 RPL37P61927 97 aaKnown RBP14.28□□□□□ -0.12
CHFR-218ENST00000540963 C6orf99Q4VX62 202 aa14.28□□□□□ -0.12
CHFR-218ENST00000540963 ATOH7Q8N100 152 aa14.27□□□□□ -0.13
CHFR-218ENST00000540963 PRO1933Q9H354 126 aa14.26□□□□□ -0.13
CHFR-218ENST00000540963 COX7BP24311 80 aa14.25□□□□□ -0.13
CHFR-218ENST00000540963 LINC00518Q8N0U6 118 aa14.25□□□□□ -0.13
CHFR-218ENST00000540963 PCP2Q8IVA1 136 aa14.24□□□□□ -0.13
CHFR-218ENST00000540963 H7C2G1 150 aa14.22□□□□□ -0.13
CHFR-218ENST00000540963 C1orf195Q5TG92 126 aa14.2□□□□□ -0.14
CHFR-218ENST00000540963 SCGB1D4Q6XE38 83 aa14.2□□□□□ -0.14
CHFR-218ENST00000540963 MUSTN1Q8IVN3 82 aa14.2□□□□□ -0.14
CHFR-218ENST00000540963 SMIM29Q86T20 159 aa14.19□□□□□ -0.14
CHFR-218ENST00000540963 TAL2Q16559 108 aa14.18□□□□□ -0.14
CHFR-218ENST00000540963 IFITM1P13164 125 aa14.17□□□□□ -0.14
CHFR-218ENST00000540963 TRBV7-6A0A0J9YX20 115 aa14.16□□□□□ -0.14
CHFR-218ENST00000540963 TEX49A0A1B0GTD5 131 aa14.16□□□□□ -0.14
CHFR-218ENST00000540963 AKR1D1P51857 326 aa14.16□□□□□ -0.14
CHFR-218ENST00000540963 Q1RN00 199 aa14.16□□□□□ -0.14
CHFR-218ENST00000540963 DEFB105AQ8NG35 78 aa14.16□□□□□ -0.14
CHFR-218ENST00000540963 C20orf202A1L168 122 aa14.15□□□□□ -0.14
CHFR-218ENST00000540963 KRTAP9-7A8MTY7 169 aa14.14□□□□□ -0.15
CHFR-218ENST00000540963 KRTAP9-1A8MXZ3 250 aaPredicted RBP14.12□□□□□ -0.15
CHFR-218ENST00000540963 Q6ZVH6 145 aa14.12□□□□□ -0.15
CHFR-218ENST00000540963 A0A0G2JQZ4 141 aa14.11□□□□□ -0.15
CHFR-218ENST00000540963 A6NDN8 102 aa14.11□□□□□ -0.15
CHFR-218ENST00000540963 IGLV5-48A0A075B6I7 105 aa14.1□□□□□ -0.15
CHFR-218ENST00000540963 A0A1B0GWB2 263 aa14.09□□□□□ -0.15
CHFR-218ENST00000540963 HIST3H2BBQ8N257 126 aa14.08□□□□□ -0.16
CHFR-218ENST00000540963 SMIM11BQ8TCY0 68 aa14.07□□□□□ -0.16
CHFR-218ENST00000540963 HIST1H2BLQ99880 126 aa14.06□□□□□ -0.16
CHFR-218ENST00000540963 COPS9Q8WXC6 57 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms