RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 DIRC1Q969H9 104 aa7.8□□□□□ -1.16
AP003559.1-201ENST00000540906 SACSQ9NZJ4 4579 aa7.8□□□□□ -1.16
AP003559.1-201ENST00000540906 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
AP003559.1-201ENST00000540906 K7ERU9 68 aa7.78□□□□□ -1.16
AP003559.1-201ENST00000540906 SDIM1Q6ZPB5 146 aa7.78□□□□□ -1.16
AP003559.1-201ENST00000540906 C1orf134Q5TEV5 83 aa7.78□□□□□ -1.16
AP003559.1-201ENST00000540906 KCNQ1DNQ9H478 68 aa7.78□□□□□ -1.16
AP003559.1-201ENST00000540906 DNAH5Q8TE73 4624 aa7.78□□□□□ -1.16
AP003559.1-201ENST00000540906 RYR2Q92736 4967 aa7.77□□□□□ -1.17
AP003559.1-201ENST00000540906 IGLV1-50A0A075B6I6 118 aa7.77□□□□□ -1.17
AP003559.1-201ENST00000540906 DNAL4O96015 105 aa7.77□□□□□ -1.17
AP003559.1-201ENST00000540906 COX7BP24311 80 aa7.77□□□□□ -1.17
AP003559.1-201ENST00000540906 ELOF1P60002 83 aaKnown RBP7.77□□□□□ -1.17
AP003559.1-201ENST00000540906 MRPL55Q7Z7F7 128 aaKnown RBP7.76□□□□□ -1.17
AP003559.1-201ENST00000540906 KRTAP11-1Q8IUC1 163 aa7.76□□□□□ -1.17
AP003559.1-201ENST00000540906 TNP2Q05952 138 aa7.75□□□□□ -1.17
AP003559.1-201ENST00000540906 LINC00528Q8N1L1 170 aa7.75□□□□□ -1.17
AP003559.1-201ENST00000540906 FAT2Q9NYQ8 4349 aa7.75□□□□□ -1.17
AP003559.1-201ENST00000540906 RYR3Q15413 4870 aa7.75□□□□□ -1.17
AP003559.1-201ENST00000540906 A0A1B0GX51 115 aa7.75□□□□□ -1.17
AP003559.1-201ENST00000540906 KRTAP4-16G5E9R7 235 aaPredicted RBP7.75□□□□□ -1.17
AP003559.1-201ENST00000540906 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
AP003559.1-201ENST00000540906 RTL8CO15255 209 aa7.74□□□□□ -1.17
AP003559.1-201ENST00000540906 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
AP003559.1-201ENST00000540906 LCE6AA0A183 80 aa7.73□□□□□ -1.17
AP003559.1-201ENST00000540906 A0A1B0GV72 72 aa7.73□□□□□ -1.17
AP003559.1-201ENST00000540906 SPRR1AP35321 89 aa7.73□□□□□ -1.17
AP003559.1-201ENST00000540906 PHF5AQ7RTV0 110 aaKnown RBP7.73□□□□□ -1.17
AP003559.1-201ENST00000540906 ORMDL1Q9P0S3 153 aa7.73□□□□□ -1.17
AP003559.1-201ENST00000540906 TRBV7-6A0A0J9YX20 115 aa7.73□□□□□ -1.17
AP003559.1-201ENST00000540906 Q6ZQY7 126 aa7.73□□□□□ -1.17
AP003559.1-201ENST00000540906 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
AP003559.1-201ENST00000540906 PRYO14603 147 aa7.72□□□□□ -1.17
AP003559.1-201ENST00000540906 PKD1P98161 4303 aa7.71□□□□□ -1.17
AP003559.1-201ENST00000540906 B5MCH6 92 aa7.71□□□□□ -1.18
AP003559.1-201ENST00000540906 Q9BRP9 147 aa7.71□□□□□ -1.18
AP003559.1-201ENST00000540906 SPACA4Q8TDM5 124 aa7.7□□□□□ -1.18
AP003559.1-201ENST00000540906 OBSCN-AS1Q96MR7 158 aa7.7□□□□□ -1.18
AP003559.1-201ENST00000540906 CDIP1Q9H305 208 aa7.69□□□□□ -1.18
AP003559.1-201ENST00000540906 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
AP003559.1-201ENST00000540906 VPS25Q9BRG1 176 aa7.68□□□□□ -1.18
AP003559.1-201ENST00000540906 J3QR89 54 aa7.68□□□□□ -1.18
AP003559.1-201ENST00000540906 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
AP003559.1-201ENST00000540906 Q6ZRX8 168 aa7.68□□□□□ -1.18
AP003559.1-201ENST00000540906 C14orf132Q9NPU4 83 aa7.68□□□□□ -1.18
AP003559.1-201ENST00000540906 IGLV5-52A0A0A0MRZ9 124 aa7.67□□□□□ -1.18
AP003559.1-201ENST00000540906 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
AP003559.1-201ENST00000540906 CBY1Q9Y3M2 126 aa7.67□□□□□ -1.18
AP003559.1-201ENST00000540906 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
AP003559.1-201ENST00000540906 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.66□□□□□ -1.18
AP003559.1-201ENST00000540906 EPM2AB3EWF7 344 aa7.65□□□□□ -1.18
AP003559.1-201ENST00000540906 TMEM256-PLSCR3K7ERE1 68 aa7.65□□□□□ -1.18
AP003559.1-201ENST00000540906 LINC01547P58512 204 aaPredicted RBP7.65□□□□□ -1.18
AP003559.1-201ENST00000540906 ST20-AS1Q8NBB2 130 aa7.65□□□□□ -1.18
AP003559.1-201ENST00000540906 PRLHP81277 87 aa7.64□□□□□ -1.19
AP003559.1-201ENST00000540906 SMCR5Q8TEV8 140 aa7.64□□□□□ -1.19
AP003559.1-201ENST00000540906 SNCGO76070 127 aa7.64□□□□□ -1.19
AP003559.1-201ENST00000540906 UBE2BP63146 152 aa7.64□□□□□ -1.19
AP003559.1-201ENST00000540906 LINC00474Q9P2X8 69 aa7.64□□□□□ -1.19
AP003559.1-201ENST00000540906 DPH3Q96FX2 82 aa7.63□□□□□ -1.19
AP003559.1-201ENST00000540906 PKIGQ9Y2B9 76 aa7.63□□□□□ -1.19
AP003559.1-201ENST00000540906 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
AP003559.1-201ENST00000540906 FAM19A1Q7Z5A9 133 aa7.62□□□□□ -1.19
AP003559.1-201ENST00000540906 Q8N377 158 aa7.62□□□□□ -1.19
AP003559.1-201ENST00000540906 DEFB105AQ8NG35 78 aa7.62□□□□□ -1.19
AP003559.1-201ENST00000540906 FAM30AQ9NZY2 134 aa7.61□□□□□ -1.19
AP003559.1-201ENST00000540906 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
AP003559.1-201ENST00000540906 XGP55808 180 aa7.6□□□□□ -1.19
AP003559.1-201ENST00000540906 GAGE2AQ6NT46 116 aa7.6□□□□□ -1.19
AP003559.1-201ENST00000540906 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
AP003559.1-201ENST00000540906 LAMTOR3Q9UHA4 124 aa7.6□□□□□ -1.19
AP003559.1-201ENST00000540906 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
AP003559.1-201ENST00000540906 LCE2BO14633 110 aa7.59□□□□□ -1.19
AP003559.1-201ENST00000540906 MT-ATP8P03928 68 aa7.58□□□□□ -1.2
AP003559.1-201ENST00000540906 NDUFV3P56181 108 aaKnown RBP7.58□□□□□ -1.2
AP003559.1-201ENST00000540906 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
AP003559.1-201ENST00000540906 FAM240AA0A1B0GVK7 77 aa7.57□□□□□ -1.2
AP003559.1-201ENST00000540906 JMJD7-PLA2G4BH0Y9G9 81 aa7.57□□□□□ -1.2
AP003559.1-201ENST00000540906 HAMPP81172 84 aa7.57□□□□□ -1.2
AP003559.1-201ENST00000540906 IGLV5-48A0A075B6I7 105 aa7.57□□□□□ -1.2
AP003559.1-201ENST00000540906 KRTAP13-1Q8IUC0 172 aa7.57□□□□□ -1.2
AP003559.1-201ENST00000540906 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
AP003559.1-201ENST00000540906 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
AP003559.1-201ENST00000540906 Q6ZQT0 140 aa7.56□□□□□ -1.2
AP003559.1-201ENST00000540906 CCKP06307 115 aa7.55□□□□□ -1.2
AP003559.1-201ENST00000540906 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
AP003559.1-201ENST00000540906 BCE1O60756 84 aa7.55□□□□□ -1.2
AP003559.1-201ENST00000540906 SMIM29Q86T20 159 aa7.55□□□□□ -1.2
AP003559.1-201ENST00000540906 LOC110117498A0A087WWA1 95 aa7.54□□□□□ -1.2
AP003559.1-201ENST00000540906 H3BQ85 93 aa7.54□□□□□ -1.2
AP003559.1-201ENST00000540906 LINC00846Q9NV44 126 aa7.54□□□□□ -1.2
AP003559.1-201ENST00000540906 PSORS1C2Q9UIG4 136 aa7.54□□□□□ -1.2
AP003559.1-201ENST00000540906 LRP1BQ9NZR2 4599 aa7.53□□□□□ -1.2
AP003559.1-201ENST00000540906 DYNC1H1Q14204 4646 aaKnown RBP7.53□□□□□ -1.2
AP003559.1-201ENST00000540906 TRBV7-4A0A0J9YYF1 115 aa7.53□□□□□ -1.2
AP003559.1-201ENST00000540906 SIGMAR1Q99720 223 aa7.53□□□□□ -1.2
AP003559.1-201ENST00000540906 UBE2AP49459 152 aa7.52□□□□□ -1.2
AP003559.1-201ENST00000540906 CIRBP-AS1Q8TBR5 109 aa7.52□□□□□ -1.2
AP003559.1-201ENST00000540906 H0Y9J4 135 aa7.52□□□□□ -1.21
AP003559.1-201ENST00000540906 Q6ZSA8 131 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms