RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
CBX3P4-202ENST00000540428 TMA7Q9Y2S6 64 aaKnown RBP6.6□□□□□ -1.35
CBX3P4-202ENST00000540428 H0Y8G0 127 aa6.59□□□□□ -1.35
CBX3P4-202ENST00000540428 LEPROTL1O95214 131 aa6.59□□□□□ -1.35
CBX3P4-202ENST00000540428 CBY1Q9Y3M2 126 aa6.59□□□□□ -1.35
CBX3P4-202ENST00000540428 LGALS3P17931 250 aaKnown RBP6.58□□□□□ -1.36
CBX3P4-202ENST00000540428 LIMD2Q9BT23 127 aa6.58□□□□□ -1.36
CBX3P4-202ENST00000540428 DPM2O94777 84 aa6.57□□□□□ -1.36
CBX3P4-202ENST00000540428 SPRR1BP22528 89 aa6.57□□□□□ -1.36
CBX3P4-202ENST00000540428 HINT1P49773 126 aaPredicted RBP6.57□□□□□ -1.36
CBX3P4-202ENST00000540428 KRTAP19-2Q3LHN2 52 aa6.57□□□□□ -1.36
CBX3P4-202ENST00000540428 SLC25A34Q6PIV7 304 aa6.57□□□□□ -1.36
CBX3P4-202ENST00000540428 ST20-AS1Q8NBB2 130 aa6.57□□□□□ -1.36
CBX3P4-202ENST00000540428 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
CBX3P4-202ENST00000540428 HSPB8Q9UJY1 196 aa6.56□□□□□ -1.36
CBX3P4-202ENST00000540428 IGKCP01834 107 aa6.55□□□□□ -1.36
CBX3P4-202ENST00000540428 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
CBX3P4-202ENST00000540428 LINC00310P59036 64 aa6.55□□□□□ -1.36
CBX3P4-202ENST00000540428 A0A0J9YXY3 114 aa6.54□□□□□ -1.36
CBX3P4-202ENST00000540428 LOC105371267A0A1B0GV96 52 aa6.54□□□□□ -1.36
CBX3P4-202ENST00000540428 EIF4EBP3O60516 100 aaPredicted RBP6.54□□□□□ -1.36
CBX3P4-202ENST00000540428 SERF1AO75920 110 aa6.54□□□□□ -1.36
CBX3P4-202ENST00000540428 MT1HP80294 61 aa6.54□□□□□ -1.36
CBX3P4-202ENST00000540428 PCOTHQ58A44 107 aa6.54□□□□□ -1.36
CBX3P4-202ENST00000540428 IGLV8-61A0A075B6I0 122 aa6.53□□□□□ -1.36
CBX3P4-202ENST00000540428 TRGC2P03986 189 aa6.53□□□□□ -1.36
CBX3P4-202ENST00000540428 NPC2P61916 151 aa6.53□□□□□ -1.36
CBX3P4-202ENST00000540428 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
CBX3P4-202ENST00000540428 DHRS4-AS1Q9P1J3 65 aa6.53□□□□□ -1.36
CBX3P4-202ENST00000540428 LAMTOR3Q9UHA4 124 aa6.53□□□□□ -1.36
CBX3P4-202ENST00000540428 E9PLD3 99 aa6.52□□□□□ -1.37
CBX3P4-202ENST00000540428 PMCHL2Q9BQD1 86 aa6.52□□□□□ -1.37
CBX3P4-202ENST00000540428 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
CBX3P4-202ENST00000540428 CD164Q04900 197 aa6.51□□□□□ -1.37
CBX3P4-202ENST00000540428 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
CBX3P4-202ENST00000540428 FABP4P15090 132 aa6.5□□□□□ -1.37
CBX3P4-202ENST00000540428 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
CBX3P4-202ENST00000540428 SPANXDQ9BXN6 97 aa6.5□□□□□ -1.37
CBX3P4-202ENST00000540428 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
CBX3P4-202ENST00000540428 OR13C6PQ8NH95 151 aa6.49□□□□□ -1.37
CBX3P4-202ENST00000540428 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
CBX3P4-202ENST00000540428 TIMM17BO60830 172 aa6.48□□□□□ -1.37
CBX3P4-202ENST00000540428 ELOF1P60002 83 aaKnown RBP6.48□□□□□ -1.37
CBX3P4-202ENST00000540428 Q5XG85 94 aa6.48□□□□□ -1.37
CBX3P4-202ENST00000540428 LITAFQ99732 161 aa6.48□□□□□ -1.37
CBX3P4-202ENST00000540428 PRO1933Q9H354 126 aa6.48□□□□□ -1.37
CBX3P4-202ENST00000540428 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
CBX3P4-202ENST00000540428 COX7BP24311 80 aa6.46□□□□□ -1.38
CBX3P4-202ENST00000540428 TAL2Q16559 108 aa6.46□□□□□ -1.38
CBX3P4-202ENST00000540428 LINC00518Q8N0U6 118 aa6.46□□□□□ -1.38
CBX3P4-202ENST00000540428 TEX49A0A1B0GTD5 131 aa6.45□□□□□ -1.38
CBX3P4-202ENST00000540428 H7C2G1 150 aa6.45□□□□□ -1.38
CBX3P4-202ENST00000540428 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
CBX3P4-202ENST00000540428 C6orf99Q4VX62 202 aa6.45□□□□□ -1.38
CBX3P4-202ENST00000540428 TRBV7-6A0A0J9YX20 115 aa6.44□□□□□ -1.38
CBX3P4-202ENST00000540428 Q1RN00 199 aa6.44□□□□□ -1.38
CBX3P4-202ENST00000540428 AKR1D1P51857 326 aa6.43□□□□□ -1.38
CBX3P4-202ENST00000540428 SYS1-DBNDD2H3BUS1 97 aa6.42□□□□□ -1.38
CBX3P4-202ENST00000540428 RPL37P61927 97 aaKnown RBP6.42□□□□□ -1.38
CBX3P4-202ENST00000540428 C1orf195Q5TG92 126 aa6.42□□□□□ -1.38
CBX3P4-202ENST00000540428 DEFB105AQ8NG35 78 aa6.42□□□□□ -1.38
CBX3P4-202ENST00000540428 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
CBX3P4-202ENST00000540428 ZNF815PA8K554 130 aa6.41□□□□□ -1.38
CBX3P4-202ENST00000540428 COLCA2A8K830 154 aa6.41□□□□□ -1.38
CBX3P4-202ENST00000540428 SMIM29Q86T20 159 aa6.41□□□□□ -1.38
CBX3P4-202ENST00000540428 IGLV5-48A0A075B6I7 105 aa6.4□□□□□ -1.38
CBX3P4-202ENST00000540428 LINC01545Q5VT33 79 aa6.4□□□□□ -1.38
CBX3P4-202ENST00000540428 M0R2T5 61 aa6.39□□□□□ -1.39
CBX3P4-202ENST00000540428 PET117Q6UWS5 81 aa6.38□□□□□ -1.39
CBX3P4-202ENST00000540428 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
CBX3P4-202ENST00000540428 COPS9Q8WXC6 57 aa6.38□□□□□ -1.39
CBX3P4-202ENST00000540428 A4D1N5 150 aa6.37□□□□□ -1.39
CBX3P4-202ENST00000540428 TTTY13Q9BZ97 58 aa6.37□□□□□ -1.39
CBX3P4-202ENST00000540428 TCL1BO95988 128 aa6.36□□□□□ -1.39
CBX3P4-202ENST00000540428 IFITM1P13164 125 aa6.36□□□□□ -1.39
CBX3P4-202ENST00000540428 Q6ZVH6 145 aa6.35□□□□□ -1.39
CBX3P4-202ENST00000540428 NHP2Q9NX24 153 aaKnown RBP6.35□□□□□ -1.39
CBX3P4-202ENST00000540428 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
CBX3P4-202ENST00000540428 A6NDN8 102 aa6.34□□□□□ -1.39
CBX3P4-202ENST00000540428 SCGB1D4Q6XE38 83 aa6.34□□□□□ -1.39
CBX3P4-202ENST00000540428 HIST1H2BKO60814 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST1H2BJP06899 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST1H2BOP23527 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST1H2BBP33778 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST1H2BDP58876 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST1H2BCP62807 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST2H2BEQ16778 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST1H2BHQ93079 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST1H2BNQ99877 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 HIST1H2BMQ99879 126 aa6.33□□□□□ -1.4
CBX3P4-202ENST00000540428 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
CBX3P4-202ENST00000540428 TRAV13-2A0A0B4J235 113 aa6.31□□□□□ -1.4
CBX3P4-202ENST00000540428 C3orf79P0CE67 100 aa6.31□□□□□ -1.4
CBX3P4-202ENST00000540428 F8WEM9 126 aa6.3□□□□□ -1.4
CBX3P4-202ENST00000540428 MUSTN1Q8IVN3 82 aa6.3□□□□□ -1.4
CBX3P4-202ENST00000540428 S100A6P06703 90 aa6.29□□□□□ -1.4
CBX3P4-202ENST00000540428 SNRPEP62304 92 aaKnown RBP6.29□□□□□ -1.4
CBX3P4-202ENST00000540428 SMIM6P0DI80 62 aa6.28□□□□□ -1.4
CBX3P4-202ENST00000540428 ANKRD39Q53RE8 183 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms