RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PKD1P98161 4303 aa9.98□□□□□ -0.81
DDB1-216ENST00000539739 HECTD4Q9Y4D8 3996 aa9.98□□□□□ -0.81
DDB1-216ENST00000539739 DNAH11Q96DT5 4516 aa9.97□□□□□ -0.81
DDB1-216ENST00000539739 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
DDB1-216ENST00000539739 LGALS3P17931 250 aaKnown RBP9.97□□□□□ -0.81
DDB1-216ENST00000539739 INAFM2P0DMQ5 153 aa9.96□□□□□ -0.81
DDB1-216ENST00000539739 Q1RN00 199 aa9.96□□□□□ -0.81
DDB1-216ENST00000539739 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.81
DDB1-216ENST00000539739 DSCR8Q96T75 97 aa9.96□□□□□ -0.82
DDB1-216ENST00000539739 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.82
DDB1-216ENST00000539739 BCE1O60756 84 aa9.95□□□□□ -0.82
DDB1-216ENST00000539739 ZNF625Q96I27 306 aaPredicted RBP9.94□□□□□ -0.82
DDB1-216ENST00000539739 LAMTOR3Q9UHA4 124 aa9.94□□□□□ -0.82
DDB1-216ENST00000539739 TSPEAR-AS2P59090 65 aa9.93□□□□□ -0.82
DDB1-216ENST00000539739 Q6JHZ5 121 aa9.93□□□□□ -0.82
DDB1-216ENST00000539739 TRIAP1O43715 76 aa9.93□□□□□ -0.82
DDB1-216ENST00000539739 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
DDB1-216ENST00000539739 FAM236DA0A1B0GTK5 79 aa9.92□□□□□ -0.82
DDB1-216ENST00000539739 FAM236CP0DP71 79 aa9.92□□□□□ -0.82
DDB1-216ENST00000539739 KRTAP10-1P60331 282 aa9.92□□□□□ -0.82
DDB1-216ENST00000539739 TLX1NBP0CAT3 122 aa9.91□□□□□ -0.82
DDB1-216ENST00000539739 ATP5EP56381 51 aaPredicted RBP9.91□□□□□ -0.82
DDB1-216ENST00000539739 COX17Q14061 63 aa9.89□□□□□ -0.83
DDB1-216ENST00000539739 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
DDB1-216ENST00000539739 PKHD1P08F94 4074 aa9.89□□□□□ -0.83
DDB1-216ENST00000539739 DNAH5Q8TE73 4624 aa9.89□□□□□ -0.83
DDB1-216ENST00000539739 LINC00474Q9P2X8 69 aa9.89□□□□□ -0.83
DDB1-216ENST00000539739 IGKV2-24A0A0C4DH68 120 aa9.88□□□□□ -0.83
DDB1-216ENST00000539739 Q6ZRP5 223 aa9.88□□□□□ -0.83
DDB1-216ENST00000539739 A0A096LNI7 61 aa9.87□□□□□ -0.83
DDB1-216ENST00000539739 LINC00158P58513 81 aa9.87□□□□□ -0.83
DDB1-216ENST00000539739 CIRBPQ14011 172 aaKnown RBP9.86□□□□□ -0.83
DDB1-216ENST00000539739 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
DDB1-216ENST00000539739 MUSTN1Q8IVN3 82 aa9.85□□□□□ -0.83
DDB1-216ENST00000539739 A0A0J9YXY3 114 aa9.85□□□□□ -0.83
DDB1-216ENST00000539739 A0A0U1RRA0 63 aa9.85□□□□□ -0.83
DDB1-216ENST00000539739 CHTF8P0CG12 524 aa9.85□□□□□ -0.83
DDB1-216ENST00000539739 ATP5EP2Q5VTU8 51 aa9.85□□□□□ -0.83
DDB1-216ENST00000539739 Q6ZSA8 131 aa9.84□□□□□ -0.83
DDB1-216ENST00000539739 FAM30AQ9NZY2 134 aa9.84□□□□□ -0.83
DDB1-216ENST00000539739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.84□□□□□ -0.83
DDB1-216ENST00000539739 SPACA4Q8TDM5 124 aa9.83□□□□□ -0.84
DDB1-216ENST00000539739 S100A7L2Q5SY68 101 aa9.82□□□□□ -0.84
DDB1-216ENST00000539739 CYSTM1Q9H1C7 97 aa9.82□□□□□ -0.84
DDB1-216ENST00000539739 PANO1I0J062 215 aa9.82□□□□□ -0.84
DDB1-216ENST00000539739 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
DDB1-216ENST00000539739 LRP1BQ9NZR2 4599 aa9.81□□□□□ -0.84
DDB1-216ENST00000539739 H7C2G1 150 aa9.81□□□□□ -0.84
DDB1-216ENST00000539739 TIMM17BO60830 172 aa9.81□□□□□ -0.84
DDB1-216ENST00000539739 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
DDB1-216ENST00000539739 NDUFC1O43677 76 aa9.8□□□□□ -0.84
DDB1-216ENST00000539739 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
DDB1-216ENST00000539739 DYNC1H1Q14204 4646 aaKnown RBP9.8□□□□□ -0.84
DDB1-216ENST00000539739 A0A087WYN8 130 aa9.79□□□□□ -0.84
DDB1-216ENST00000539739 CD164Q04900 197 aa9.79□□□□□ -0.84
DDB1-216ENST00000539739 C9orf129Q5T035 196 aaKnown RBP9.79□□□□□ -0.84
DDB1-216ENST00000539739 EPPK1P58107 5090 aaKnown RBP9.79□□□□□ -0.84
DDB1-216ENST00000539739 FAM19A1Q7Z5A9 133 aa9.78□□□□□ -0.84
DDB1-216ENST00000539739 SCXQ7RTU7 201 aa9.78□□□□□ -0.84
DDB1-216ENST00000539739 CIRBP-AS1Q8TBR5 109 aa9.78□□□□□ -0.84
DDB1-216ENST00000539739 TRBV10-3A0A0K0K1G6 114 aa9.77□□□□□ -0.85
DDB1-216ENST00000539739 PLAC8Q9NZF1 115 aa9.77□□□□□ -0.85
DDB1-216ENST00000539739 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
DDB1-216ENST00000539739 PMAIP1Q13794 54 aa9.76□□□□□ -0.85
DDB1-216ENST00000539739 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
DDB1-216ENST00000539739 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
DDB1-216ENST00000539739 LITAFQ99732 161 aa9.75□□□□□ -0.85
DDB1-216ENST00000539739 DNAH8Q96JB1 4490 aa9.75□□□□□ -0.85
DDB1-216ENST00000539739 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
DDB1-216ENST00000539739 HAMPP81172 84 aa9.74□□□□□ -0.85
DDB1-216ENST00000539739 PLA2G2DQ9UNK4 145 aa9.74□□□□□ -0.85
DDB1-216ENST00000539739 PRR15Q8IV56 129 aa9.74□□□□□ -0.85
DDB1-216ENST00000539739 DNAL4O96015 105 aa9.73□□□□□ -0.85
DDB1-216ENST00000539739 KLKP1Q107X0 134 aa9.73□□□□□ -0.85
DDB1-216ENST00000539739 BRK1Q8WUW1 75 aa9.73□□□□□ -0.85
DDB1-216ENST00000539739 CLEC2BQ92478 149 aa9.73□□□□□ -0.85
DDB1-216ENST00000539739 TRBV7-6A0A0J9YX20 115 aa9.71□□□□□ -0.85
DDB1-216ENST00000539739 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.85
DDB1-216ENST00000539739 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.85
DDB1-216ENST00000539739 NKAPP1Q8N9T2 125 aa9.71□□□□□ -0.85
DDB1-216ENST00000539739 LINC00308Q8TCZ7 52 aa9.71□□□□□ -0.85
DDB1-216ENST00000539739 H7BZZ5 65 aa9.71□□□□□ -0.86
DDB1-216ENST00000539739 BAALC-AS2P0C853 105 aa9.71□□□□□ -0.86
DDB1-216ENST00000539739 TRAV7A0A075B6U4 112 aa9.7□□□□□ -0.86
DDB1-216ENST00000539739 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
DDB1-216ENST00000539739 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
DDB1-216ENST00000539739 GHRHP01286 108 aa9.69□□□□□ -0.86
DDB1-216ENST00000539739 VPREB1P12018 145 aa9.69□□□□□ -0.86
DDB1-216ENST00000539739 SOSTDC1Q6X4U4 206 aa9.69□□□□□ -0.86
DDB1-216ENST00000539739 KRTAP7-1Q8IUC3 87 aa9.69□□□□□ -0.86
DDB1-216ENST00000539739 PHF5AQ7RTV0 110 aaKnown RBP9.68□□□□□ -0.86
DDB1-216ENST00000539739 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
DDB1-216ENST00000539739 MRPL55Q7Z7F7 128 aaKnown RBP9.67□□□□□ -0.86
DDB1-216ENST00000539739 OBSCN-AS1Q96MR7 158 aa9.67□□□□□ -0.86
DDB1-216ENST00000539739 APOBP04114 4563 aaKnown RBP9.67□□□□□ -0.86
DDB1-216ENST00000539739 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
DDB1-216ENST00000539739 UBE2BP63146 152 aa9.66□□□□□ -0.86
DDB1-216ENST00000539739 Q8NDZ9 215 aa9.66□□□□□ -0.86
DDB1-216ENST00000539739 M0R378 163 aa9.65□□□□□ -0.86
DDB1-216ENST00000539739 CCKP06307 115 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms