RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 RPL37AP8A6NKH3 93 aa13.22□□□□□ -0.29
SMPDL3A-203ENST00000539041 TRBV7-7A0A0K0K1E9 115 aa13.22□□□□□ -0.29
SMPDL3A-203ENST00000539041 MRPL55Q7Z7F7 128 aaKnown RBP13.22□□□□□ -0.29
SMPDL3A-203ENST00000539041 C16orf90A8MZG2 172 aa13.21□□□□□ -0.29
SMPDL3A-203ENST00000539041 A0A096LNI7 61 aa13.2□□□□□ -0.3
SMPDL3A-203ENST00000539041 CSMD3Q7Z407 3707 aa13.2□□□□□ -0.3
SMPDL3A-203ENST00000539041 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.2□□□□□ -0.3
SMPDL3A-203ENST00000539041 SPRR1AP35321 89 aa13.2□□□□□ -0.3
SMPDL3A-203ENST00000539041 LYSTQ99698 3801 aa13.2□□□□□ -0.3
SMPDL3A-203ENST00000539041 LINC00846Q9NV44 126 aa13.2□□□□□ -0.3
SMPDL3A-203ENST00000539041 LOC110117498A0A087WWA1 95 aa13.18□□□□□ -0.3
SMPDL3A-203ENST00000539041 KRTAP4-16G5E9R7 235 aaPredicted RBP13.18□□□□□ -0.3
SMPDL3A-203ENST00000539041 PLECQ15149 4684 aaKnown RBP13.17□□□□□ -0.3
SMPDL3A-203ENST00000539041 LRCOL1A6NCL2 159 aa13.17□□□□□ -0.3
SMPDL3A-203ENST00000539041 Q6ZQT0 140 aa13.17□□□□□ -0.3
SMPDL3A-203ENST00000539041 DNAH10Q8IVF4 4471 aa13.17□□□□□ -0.3
SMPDL3A-203ENST00000539041 ETDCA0A1B0GVM5 59 aa13.17□□□□□ -0.3
SMPDL3A-203ENST00000539041 Q6ZRN7 208 aaPredicted RBP13.17□□□□□ -0.3
SMPDL3A-203ENST00000539041 IMUPQ9GZP8 106 aa13.17□□□□□ -0.3
SMPDL3A-203ENST00000539041 B5MCH6 92 aa13.16□□□□□ -0.3
SMPDL3A-203ENST00000539041 Q6ZRX8 168 aa13.16□□□□□ -0.3
SMPDL3A-203ENST00000539041 PRKDCP78527 4128 aaKnown RBP13.16□□□□□ -0.3
SMPDL3A-203ENST00000539041 IGKV2-24A0A0C4DH68 120 aa13.15□□□□□ -0.3
SMPDL3A-203ENST00000539041 DSCR8Q96T75 97 aa13.15□□□□□ -0.3
SMPDL3A-203ENST00000539041 DHRS4-AS1Q9P1J3 65 aa13.15□□□□□ -0.3
SMPDL3A-203ENST00000539041 DNAH7Q8WXX0 4024 aa13.15□□□□□ -0.3
SMPDL3A-203ENST00000539041 PDE6GP18545 87 aa13.14□□□□□ -0.31
SMPDL3A-203ENST00000539041 NDUFV3P56181 108 aaKnown RBP13.14□□□□□ -0.31
SMPDL3A-203ENST00000539041 Q6JHZ5 121 aa13.12□□□□□ -0.31
SMPDL3A-203ENST00000539041 PKIGQ9Y2B9 76 aa13.12□□□□□ -0.31
SMPDL3A-203ENST00000539041 C9orf163Q8N9P6 203 aa13.11□□□□□ -0.31
SMPDL3A-203ENST00000539041 VPS13DQ5THJ4 4388 aa13.1□□□□□ -0.31
SMPDL3A-203ENST00000539041 A0A1W2PNN7 141 aa13.1□□□□□ -0.31
SMPDL3A-203ENST00000539041 M0R2N4 97 aa13.1□□□□□ -0.31
SMPDL3A-203ENST00000539041 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
SMPDL3A-203ENST00000539041 Q9BRP9 147 aa13.1□□□□□ -0.31
SMPDL3A-203ENST00000539041 TRBV7-4A0A0J9YYF1 115 aa13.09□□□□□ -0.31
SMPDL3A-203ENST00000539041 STARD9Q9P2P6 4700 aa13.07□□□□□ -0.32
SMPDL3A-203ENST00000539041 ANAPC13Q9BS18 74 aa13.07□□□□□ -0.32
SMPDL3A-203ENST00000539041 CHTF8P0CG12 524 aa13.05□□□□□ -0.32
SMPDL3A-203ENST00000539041 LINC01547P58512 204 aaPredicted RBP13.05□□□□□ -0.32
SMPDL3A-203ENST00000539041 Q8N377 158 aa13.05□□□□□ -0.32
SMPDL3A-203ENST00000539041 DEFB105AQ8NG35 78 aa13.05□□□□□ -0.32
SMPDL3A-203ENST00000539041 IGKV3D-7A0A0C4DH55 119 aa13.04□□□□□ -0.32
SMPDL3A-203ENST00000539041 TENM2Q9NT68 2774 aa13.04□□□□□ -0.32
SMPDL3A-203ENST00000539041 UBE2BP63146 152 aa13.04□□□□□ -0.32
SMPDL3A-203ENST00000539041 UBL5Q9BZL1 73 aa13.04□□□□□ -0.32
SMPDL3A-203ENST00000539041 MEGF8Q7Z7M0 2845 aa13.02□□□□□ -0.32
SMPDL3A-203ENST00000539041 ATP5EP2Q5VTU8 51 aa13.01□□□□□ -0.33
SMPDL3A-203ENST00000539041 Q6ZR54 194 aa13.01□□□□□ -0.33
SMPDL3A-203ENST00000539041 IGLV5-48A0A075B6I7 105 aa13□□□□□ -0.33
SMPDL3A-203ENST00000539041 FAM236AA0A1B0GUQ0 79 aa13□□□□□ -0.33
SMPDL3A-203ENST00000539041 FAM236BA0A1B0GV22 79 aa13□□□□□ -0.33
SMPDL3A-203ENST00000539041 LINC00474Q9P2X8 69 aa13□□□□□ -0.33
SMPDL3A-203ENST00000539041 A0A087WTM6 91 aa12.99□□□□□ -0.33
SMPDL3A-203ENST00000539041 ERC2-IT1O76042 136 aa12.99□□□□□ -0.33
SMPDL3A-203ENST00000539041 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
SMPDL3A-203ENST00000539041 ST20-AS1Q8NBB2 130 aa12.99□□□□□ -0.33
SMPDL3A-203ENST00000539041 DNHD1Q96M86 4753 aa12.98□□□□□ -0.33
SMPDL3A-203ENST00000539041 FAM19A1Q7Z5A9 133 aa12.98□□□□□ -0.33
SMPDL3A-203ENST00000539041 Q6ZVQ6 151 aa12.94□□□□□ -0.34
SMPDL3A-203ENST00000539041 PRLHP81277 87 aa12.93□□□□□ -0.34
SMPDL3A-203ENST00000539041 C3orf22Q8N5N4 141 aa12.93□□□□□ -0.34
SMPDL3A-203ENST00000539041 PANO1I0J062 215 aa12.92□□□□□ -0.34
SMPDL3A-203ENST00000539041 TNP2Q05952 138 aa12.92□□□□□ -0.34
SMPDL3A-203ENST00000539041 KRTAP11-1Q8IUC1 163 aa12.92□□□□□ -0.34
SMPDL3A-203ENST00000539041 HIST1H4AP62805 103 aaKnown RBP12.9□□□□□ -0.34
SMPDL3A-203ENST00000539041 SPACA4Q8TDM5 124 aa12.89□□□□□ -0.35
SMPDL3A-203ENST00000539041 C1orf134Q5TEV5 83 aa12.89□□□□□ -0.35
SMPDL3A-203ENST00000539041 RTL8CO15255 209 aa12.88□□□□□ -0.35
SMPDL3A-203ENST00000539041 A0A087WVE0 104 aa12.87□□□□□ -0.35
SMPDL3A-203ENST00000539041 H0Y9J4 135 aa12.87□□□□□ -0.35
SMPDL3A-203ENST00000539041 LY6G6CO95867 125 aa12.87□□□□□ -0.35
SMPDL3A-203ENST00000539041 DPH3Q96FX2 82 aa12.87□□□□□ -0.35
SMPDL3A-203ENST00000539041 HIGD2AQ9BW72 106 aa12.87□□□□□ -0.35
SMPDL3A-203ENST00000539041 HAMPP81172 84 aa12.86□□□□□ -0.35
SMPDL3A-203ENST00000539041 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.86□□□□□ -0.35
SMPDL3A-203ENST00000539041 EPM2AB3EWF7 344 aa12.85□□□□□ -0.35
SMPDL3A-203ENST00000539041 C1orf137Q5JT78 98 aa12.85□□□□□ -0.35
SMPDL3A-203ENST00000539041 SMIM29Q86T20 159 aa12.85□□□□□ -0.35
SMPDL3A-203ENST00000539041 WWC2-AS2Q96NR7 200 aa12.85□□□□□ -0.35
SMPDL3A-203ENST00000539041 FBN3Q75N90 2809 aa12.85□□□□□ -0.35
SMPDL3A-203ENST00000539041 ATOX1O00244 68 aa12.83□□□□□ -0.36
SMPDL3A-203ENST00000539041 CXCL6P80162 114 aa12.83□□□□□ -0.36
SMPDL3A-203ENST00000539041 LINC00476Q8WZB0 136 aa12.82□□□□□ -0.36
SMPDL3A-203ENST00000539041 A0A1B0GW54 56 aa12.81□□□□□ -0.36
SMPDL3A-203ENST00000539041 F8WEM9 126 aa12.81□□□□□ -0.36
SMPDL3A-203ENST00000539041 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMPDL3A-203ENST00000539041 UBE2AP49459 152 aa12.81□□□□□ -0.36
SMPDL3A-203ENST00000539041 DNAH6Q9C0G6 4158 aa12.81□□□□□ -0.36
SMPDL3A-203ENST00000539041 A0A1W2PNM2 257 aa12.81□□□□□ -0.36
SMPDL3A-203ENST00000539041 CCDC179H3BU77 68 aa12.81□□□□□ -0.36
SMPDL3A-203ENST00000539041 DNAH17Q9UFH2 4485 aa12.8□□□□□ -0.36
SMPDL3A-203ENST00000539041 BCE1O60756 84 aa12.8□□□□□ -0.36
SMPDL3A-203ENST00000539041 C3orf84H3BNL1 204 aa12.79□□□□□ -0.36
SMPDL3A-203ENST00000539041 Q8NBF4 154 aa12.79□□□□□ -0.36
SMPDL3A-203ENST00000539041 IGLV5-52A0A0A0MRZ9 124 aa12.77□□□□□ -0.36
SMPDL3A-203ENST00000539041 NREPQ16612 68 aa12.77□□□□□ -0.36
SMPDL3A-203ENST00000539041 KMT2AQ03164 3969 aa12.76□□□□□ -0.37
SMPDL3A-203ENST00000539041 SPRR1BP22528 89 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms