RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 S100A7L2Q5SY68 101 aa6.96□□□□□ -1.3
VAMP1-206ENST00000538970 PMCHL2Q9BQD1 86 aa6.96□□□□□ -1.3
VAMP1-206ENST00000538970 LINC01547P58512 204 aaPredicted RBP6.95□□□□□ -1.3
VAMP1-206ENST00000538970 JOSD1Q15040 202 aaPredicted RBP6.95□□□□□ -1.3
VAMP1-206ENST00000538970 SOSTDC1Q6X4U4 206 aa6.95□□□□□ -1.3
VAMP1-206ENST00000538970 HSPB8Q9UJY1 196 aa6.95□□□□□ -1.3
VAMP1-206ENST00000538970 ZNF73O43830 326 aaPredicted RBP6.94□□□□□ -1.3
VAMP1-206ENST00000538970 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
VAMP1-206ENST00000538970 IGKCP01834 107 aa6.94□□□□□ -1.3
VAMP1-206ENST00000538970 FABP4P15090 132 aa6.94□□□□□ -1.3
VAMP1-206ENST00000538970 XP32Q5T750 250 aa6.94□□□□□ -1.3
VAMP1-206ENST00000538970 C9orf153Q5TBE3 101 aa6.94□□□□□ -1.3
VAMP1-206ENST00000538970 NPC2P61916 151 aa6.93□□□□□ -1.3
VAMP1-206ENST00000538970 ADAMTSL4-AS1Q5T5F5 129 aa6.93□□□□□ -1.3
VAMP1-206ENST00000538970 ST20-AS1Q8NBB2 130 aa6.93□□□□□ -1.3
VAMP1-206ENST00000538970 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
VAMP1-206ENST00000538970 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
VAMP1-206ENST00000538970 C5orf52A6NGY3 159 aa6.9□□□□□ -1.3
VAMP1-206ENST00000538970 E9PLD3 99 aa6.9□□□□□ -1.3
VAMP1-206ENST00000538970 SPRR1BP22528 89 aa6.88□□□□□ -1.31
VAMP1-206ENST00000538970 LITAFQ99732 161 aa6.88□□□□□ -1.31
VAMP1-206ENST00000538970 SPANXCQ9NY87 97 aa6.88□□□□□ -1.31
VAMP1-206ENST00000538970 CBY1Q9Y3M2 126 aa6.88□□□□□ -1.31
VAMP1-206ENST00000538970 HINT1P49773 126 aaPredicted RBP6.87□□□□□ -1.31
VAMP1-206ENST00000538970 LINC00308Q8TCZ7 52 aa6.86□□□□□ -1.31
VAMP1-206ENST00000538970 COLCA2A8K830 154 aa6.85□□□□□ -1.31
VAMP1-206ENST00000538970 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
VAMP1-206ENST00000538970 SLC25A34Q6PIV7 304 aa6.85□□□□□ -1.31
VAMP1-206ENST00000538970 OR13C6PQ8NH95 151 aa6.85□□□□□ -1.31
VAMP1-206ENST00000538970 LIMD2Q9BT23 127 aa6.85□□□□□ -1.31
VAMP1-206ENST00000538970 DHRS4-AS1Q9P1J3 65 aa6.85□□□□□ -1.31
VAMP1-206ENST00000538970 SYS1-DBNDD2H3BUS1 97 aa6.84□□□□□ -1.31
VAMP1-206ENST00000538970 TIMM17BO60830 172 aa6.84□□□□□ -1.31
VAMP1-206ENST00000538970 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.83□□□□□ -1.32
VAMP1-206ENST00000538970 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
VAMP1-206ENST00000538970 HRCT1Q6UXD1 115 aa6.83□□□□□ -1.32
VAMP1-206ENST00000538970 SPANXDQ9BXN6 97 aa6.83□□□□□ -1.32
VAMP1-206ENST00000538970 ELOF1P60002 83 aaKnown RBP6.82□□□□□ -1.32
VAMP1-206ENST00000538970 LAMTOR3Q9UHA4 124 aa6.82□□□□□ -1.32
VAMP1-206ENST00000538970 COX7BP24311 80 aa6.81□□□□□ -1.32
VAMP1-206ENST00000538970 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
VAMP1-206ENST00000538970 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
VAMP1-206ENST00000538970 ZNF815PA8K554 130 aa6.8□□□□□ -1.32
VAMP1-206ENST00000538970 C6orf99Q4VX62 202 aa6.8□□□□□ -1.32
VAMP1-206ENST00000538970 PCOTHQ58A44 107 aa6.8□□□□□ -1.32
VAMP1-206ENST00000538970 TTTY13Q9BZ97 58 aa6.8□□□□□ -1.32
VAMP1-206ENST00000538970 Q1RN00 199 aa6.79□□□□□ -1.32
VAMP1-206ENST00000538970 LINC00518Q8N0U6 118 aa6.79□□□□□ -1.32
VAMP1-206ENST00000538970 IGLV8-61A0A075B6I0 122 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BKO60814 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BJP06899 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BOP23527 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BBP33778 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BDP58876 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BCP62807 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 CD164Q04900 197 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST2H2BEQ16778 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.78□□□□□ -1.32
VAMP1-206ENST00000538970 PET117Q6UWS5 81 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BHQ93079 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BNQ99877 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 HIST1H2BMQ99879 126 aa6.78□□□□□ -1.32
VAMP1-206ENST00000538970 MT1HP80294 61 aa6.77□□□□□ -1.33
VAMP1-206ENST00000538970 TAL2Q16559 108 aa6.77□□□□□ -1.33
VAMP1-206ENST00000538970 SLC7A5P1Q8MH63 180 aa6.77□□□□□ -1.33
VAMP1-206ENST00000538970 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
VAMP1-206ENST00000538970 PRO1933Q9H354 126 aa6.77□□□□□ -1.33
VAMP1-206ENST00000538970 TEX49A0A1B0GTD5 131 aa6.76□□□□□ -1.33
VAMP1-206ENST00000538970 SMIM29Q86T20 159 aa6.76□□□□□ -1.33
VAMP1-206ENST00000538970 TRBV7-6A0A0J9YX20 115 aa6.75□□□□□ -1.33
VAMP1-206ENST00000538970 H7C2G1 150 aa6.75□□□□□ -1.33
VAMP1-206ENST00000538970 Q5XG85 94 aa6.75□□□□□ -1.33
VAMP1-206ENST00000538970 IGLV5-48A0A075B6I7 105 aa6.74□□□□□ -1.33
VAMP1-206ENST00000538970 C3orf79P0CE67 100 aa6.74□□□□□ -1.33
VAMP1-206ENST00000538970 A0A1B0GWB2 263 aa6.73□□□□□ -1.33
VAMP1-206ENST00000538970 CFC1BP0CG36 223 aa6.72□□□□□ -1.33
VAMP1-206ENST00000538970 AKR1D1P51857 326 aa6.72□□□□□ -1.33
VAMP1-206ENST00000538970 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
VAMP1-206ENST00000538970 SCGB1D4Q6XE38 83 aa6.72□□□□□ -1.33
VAMP1-206ENST00000538970 A0A0G2JQZ4 141 aa6.71□□□□□ -1.34
VAMP1-206ENST00000538970 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.34
VAMP1-206ENST00000538970 COPS9Q8WXC6 57 aa6.71□□□□□ -1.34
VAMP1-206ENST00000538970 A6NDN8 102 aa6.7□□□□□ -1.34
VAMP1-206ENST00000538970 IFITM1P13164 125 aa6.7□□□□□ -1.34
VAMP1-206ENST00000538970 KRTDAPP60985 99 aa6.7□□□□□ -1.34
VAMP1-206ENST00000538970 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
VAMP1-206ENST00000538970 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
VAMP1-206ENST00000538970 KRTAP10-6P60371 365 aaPredicted RBP6.68□□□□□ -1.34
VAMP1-206ENST00000538970 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
VAMP1-206ENST00000538970 Q6ZVH6 145 aa6.68□□□□□ -1.34
VAMP1-206ENST00000538970 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
VAMP1-206ENST00000538970 C20orf202A1L168 122 aa6.67□□□□□ -1.34
VAMP1-206ENST00000538970 A4D1N5 150 aa6.67□□□□□ -1.34
VAMP1-206ENST00000538970 PCP2Q8IVA1 136 aa6.66□□□□□ -1.34
VAMP1-206ENST00000538970 NHP2Q9NX24 153 aaKnown RBP6.66□□□□□ -1.34
VAMP1-206ENST00000538970 ATOH7Q8N100 152 aa6.65□□□□□ -1.34
VAMP1-206ENST00000538970 SMIM11BQ8TCY0 68 aa6.65□□□□□ -1.34
VAMP1-206ENST00000538970 TRAV13-2A0A0B4J235 113 aa6.64□□□□□ -1.35
VAMP1-206ENST00000538970 TCL1BO95988 128 aa6.63□□□□□ -1.35
VAMP1-206ENST00000538970 F8WEM9 126 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms