RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
ATL3-203ENST00000538786 A0A096LNI7 61 aa9.48□□□□□ -0.89
ATL3-203ENST00000538786 PRYO14603 147 aa9.48□□□□□ -0.89
ATL3-203ENST00000538786 GHRHP01286 108 aa9.48□□□□□ -0.89
ATL3-203ENST00000538786 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
ATL3-203ENST00000538786 RPL37AP8A6NKH3 93 aa9.48□□□□□ -0.89
ATL3-203ENST00000538786 LYSTQ99698 3801 aa9.46□□□□□ -0.89
ATL3-203ENST00000538786 SPRR1AP35321 89 aa9.46□□□□□ -0.9
ATL3-203ENST00000538786 M0R2N4 97 aa9.45□□□□□ -0.9
ATL3-203ENST00000538786 IGKV2-24A0A0C4DH68 120 aa9.44□□□□□ -0.9
ATL3-203ENST00000538786 KRTAP4-16G5E9R7 235 aaPredicted RBP9.44□□□□□ -0.9
ATL3-203ENST00000538786 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
ATL3-203ENST00000538786 C9orf163Q8N9P6 203 aa9.44□□□□□ -0.9
ATL3-203ENST00000538786 LAMTOR3Q9UHA4 124 aa9.44□□□□□ -0.9
ATL3-203ENST00000538786 PKIGQ9Y2B9 76 aa9.44□□□□□ -0.9
ATL3-203ENST00000538786 CCKP06307 115 aa9.44□□□□□ -0.9
ATL3-203ENST00000538786 TENM2Q9NT68 2774 aa9.44□□□□□ -0.9
ATL3-203ENST00000538786 RBM3P98179 157 aaKnown RBP9.43□□□□□ -0.9
ATL3-203ENST00000538786 Q6ZRX8 168 aa9.43□□□□□ -0.9
ATL3-203ENST00000538786 B5MCH6 92 aa9.43□□□□□ -0.9
ATL3-203ENST00000538786 Q6ZR54 194 aa9.43□□□□□ -0.9
ATL3-203ENST00000538786 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
ATL3-203ENST00000538786 DHRS4-AS1Q9P1J3 65 aa9.43□□□□□ -0.9
ATL3-203ENST00000538786 ETDCA0A1B0GVM5 59 aa9.42□□□□□ -0.9
ATL3-203ENST00000538786 TGP01266 2768 aa9.41□□□□□ -0.9
ATL3-203ENST00000538786 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
ATL3-203ENST00000538786 DNAH7Q8WXX0 4024 aa9.41□□□□□ -0.9
ATL3-203ENST00000538786 LINC00643Q86TS7 51 aa9.41□□□□□ -0.9
ATL3-203ENST00000538786 LOC110117498A0A087WWA1 95 aa9.4□□□□□ -0.9
ATL3-203ENST00000538786 REG3GQ6UW15 175 aa9.39□□□□□ -0.91
ATL3-203ENST00000538786 PLECQ15149 4684 aaKnown RBP9.38□□□□□ -0.91
ATL3-203ENST00000538786 A0A087WTM6 91 aa9.38□□□□□ -0.91
ATL3-203ENST00000538786 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
ATL3-203ENST00000538786 NDUFV3P56181 108 aaKnown RBP9.38□□□□□ -0.91
ATL3-203ENST00000538786 Q6Q795 121 aa9.38□□□□□ -0.91
ATL3-203ENST00000538786 Q6ZQT0 140 aa9.38□□□□□ -0.91
ATL3-203ENST00000538786 DSCR8Q96T75 97 aa9.38□□□□□ -0.91
ATL3-203ENST00000538786 Q9BRP9 147 aa9.38□□□□□ -0.91
ATL3-203ENST00000538786 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
ATL3-203ENST00000538786 LINC00474Q9P2X8 69 aa9.38□□□□□ -0.91
ATL3-203ENST00000538786 PDE6GP18545 87 aa9.37□□□□□ -0.91
ATL3-203ENST00000538786 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
ATL3-203ENST00000538786 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
ATL3-203ENST00000538786 WWC2-AS2Q96NR7 200 aa9.35□□□□□ -0.91
ATL3-203ENST00000538786 DNAH10Q8IVF4 4471 aa9.34□□□□□ -0.91
ATL3-203ENST00000538786 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
ATL3-203ENST00000538786 LY6G6CO95867 125 aa9.33□□□□□ -0.92
ATL3-203ENST00000538786 LINC01547P58512 204 aaPredicted RBP9.33□□□□□ -0.92
ATL3-203ENST00000538786 UBE2BP63146 152 aa9.33□□□□□ -0.92
ATL3-203ENST00000538786 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
ATL3-203ENST00000538786 Q8N377 158 aa9.33□□□□□ -0.92
ATL3-203ENST00000538786 DEFB105AQ8NG35 78 aa9.33□□□□□ -0.92
ATL3-203ENST00000538786 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
ATL3-203ENST00000538786 VPS13DQ5THJ4 4388 aa9.32□□□□□ -0.92
ATL3-203ENST00000538786 PHF5AQ7RTV0 110 aaKnown RBP9.31□□□□□ -0.92
ATL3-203ENST00000538786 IGLV5-48A0A075B6I7 105 aa9.31□□□□□ -0.92
ATL3-203ENST00000538786 Q6JHZ5 121 aa9.3□□□□□ -0.92
ATL3-203ENST00000538786 PANO1I0J062 215 aa9.29□□□□□ -0.92
ATL3-203ENST00000538786 ERC2-IT1O76042 136 aa9.29□□□□□ -0.92
ATL3-203ENST00000538786 FAM19A1Q7Z5A9 133 aa9.29□□□□□ -0.92
ATL3-203ENST00000538786 LINC00476Q8WZB0 136 aa9.29□□□□□ -0.92
ATL3-203ENST00000538786 RTL8CO15255 209 aa9.29□□□□□ -0.92
ATL3-203ENST00000538786 ST20-AS1Q8NBB2 130 aa9.29□□□□□ -0.92
ATL3-203ENST00000538786 SPACA4Q8TDM5 124 aa9.29□□□□□ -0.92
ATL3-203ENST00000538786 KRTAP11-1Q8IUC1 163 aa9.27□□□□□ -0.93
ATL3-203ENST00000538786 DPH3Q96FX2 82 aa9.27□□□□□ -0.93
ATL3-203ENST00000538786 UBL5Q9BZL1 73 aa9.27□□□□□ -0.93
ATL3-203ENST00000538786 EPM2AB3EWF7 344 aa9.27□□□□□ -0.93
ATL3-203ENST00000538786 PRLHP81277 87 aa9.27□□□□□ -0.93
ATL3-203ENST00000538786 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.27□□□□□ -0.93
ATL3-203ENST00000538786 SS18L2Q9UHA2 77 aa9.26□□□□□ -0.93
ATL3-203ENST00000538786 H0Y9J4 135 aa9.25□□□□□ -0.93
ATL3-203ENST00000538786 ATP5EP2Q5VTU8 51 aa9.25□□□□□ -0.93
ATL3-203ENST00000538786 C3orf22Q8N5N4 141 aa9.24□□□□□ -0.93
ATL3-203ENST00000538786 IGKV3D-7A0A0C4DH55 119 aa9.23□□□□□ -0.93
ATL3-203ENST00000538786 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
ATL3-203ENST00000538786 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
ATL3-203ENST00000538786 TNP2Q05952 138 aa9.23□□□□□ -0.93
ATL3-203ENST00000538786 HIGD2AQ9BW72 106 aa9.23□□□□□ -0.93
ATL3-203ENST00000538786 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
ATL3-203ENST00000538786 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.94
ATL3-203ENST00000538786 BCE1O60756 84 aa9.2□□□□□ -0.94
ATL3-203ENST00000538786 Q6ZVQ6 151 aa9.2□□□□□ -0.94
ATL3-203ENST00000538786 SMIM29Q86T20 159 aa9.19□□□□□ -0.94
ATL3-203ENST00000538786 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
ATL3-203ENST00000538786 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
ATL3-203ENST00000538786 UBE2AP49459 152 aa9.19□□□□□ -0.94
ATL3-203ENST00000538786 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
ATL3-203ENST00000538786 PLAC8Q9NZF1 115 aa9.17□□□□□ -0.94
ATL3-203ENST00000538786 SMIM20Q8N5G0 67 aa9.17□□□□□ -0.94
ATL3-203ENST00000538786 A0A1B0GW54 56 aa9.16□□□□□ -0.94
ATL3-203ENST00000538786 F8WEM9 126 aa9.16□□□□□ -0.94
ATL3-203ENST00000538786 C5orf47Q569G3 176 aa9.16□□□□□ -0.94
ATL3-203ENST00000538786 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
ATL3-203ENST00000538786 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
ATL3-203ENST00000538786 KMT2AQ03164 3969 aa9.16□□□□□ -0.94
ATL3-203ENST00000538786 HAMPP81172 84 aa9.15□□□□□ -0.95
ATL3-203ENST00000538786 SPRR1BP22528 89 aa9.14□□□□□ -0.95
ATL3-203ENST00000538786 A0A1W2PNM2 257 aa9.13□□□□□ -0.95
ATL3-203ENST00000538786 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms