RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TMEM256-PLSCR3K7ERE1 68 aa8.1□□□□□ -1.11
SCARB1-204ENST00000535005 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
SCARB1-204ENST00000535005 PSCAO43653 123 aa8.1□□□□□ -1.11
SCARB1-204ENST00000535005 H3BQ85 93 aa8.09□□□□□ -1.11
SCARB1-204ENST00000535005 RTL8CO15255 209 aa8.09□□□□□ -1.11
SCARB1-204ENST00000535005 NCR3O14931 201 aa8.08□□□□□ -1.12
SCARB1-204ENST00000535005 TOMM7Q9P0U1 55 aa8.08□□□□□ -1.12
SCARB1-204ENST00000535005 LRCOL1A6NCL2 159 aa8.08□□□□□ -1.12
SCARB1-204ENST00000535005 C9orf129Q5T035 196 aaKnown RBP8.08□□□□□ -1.12
SCARB1-204ENST00000535005 Q8IZM0 81 aa8.07□□□□□ -1.12
SCARB1-204ENST00000535005 UBL5Q9BZL1 73 aa8.07□□□□□ -1.12
SCARB1-204ENST00000535005 COX17Q14061 63 aa8.06□□□□□ -1.12
SCARB1-204ENST00000535005 Q8N814 137 aa8.06□□□□□ -1.12
SCARB1-204ENST00000535005 C15orf56Q8N910 161 aa8.06□□□□□ -1.12
SCARB1-204ENST00000535005 A0A087WTM6 91 aa8.06□□□□□ -1.12
SCARB1-204ENST00000535005 FRAS1Q86XX4 4008 aa8.05□□□□□ -1.12
SCARB1-204ENST00000535005 A0A087WVE0 104 aa8.05□□□□□ -1.12
SCARB1-204ENST00000535005 GVQW2A0A096LPI5 108 aaPredicted RBP8.05□□□□□ -1.12
SCARB1-204ENST00000535005 GHRHP01286 108 aa8.05□□□□□ -1.12
SCARB1-204ENST00000535005 C14orf177Q52M58 125 aa8.05□□□□□ -1.12
SCARB1-204ENST00000535005 CYSTM1Q9H1C7 97 aa8.05□□□□□ -1.12
SCARB1-204ENST00000535005 FAT2Q9NYQ8 4349 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 LOC110117498A0A087WWA1 95 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 PDE6GP18545 87 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 TNP2Q05952 138 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 KIAA0087Q14695 138 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 C6orf226Q5I0X4 101 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 LINC00336Q6ZUF6 198 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 RYR3Q15413 4870 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 PFN2P35080 140 aa8.03□□□□□ -1.12
SCARB1-204ENST00000535005 TRAV7A0A075B6U4 112 aa8.02□□□□□ -1.13
SCARB1-204ENST00000535005 EPM2AB3EWF7 344 aa8.02□□□□□ -1.13
SCARB1-204ENST00000535005 F8WDY8 70 aa8.02□□□□□ -1.13
SCARB1-204ENST00000535005 SPAG11BQ08648 103 aa8.02□□□□□ -1.13
SCARB1-204ENST00000535005 HIGD2BQ4VC39 106 aa8.01□□□□□ -1.13
SCARB1-204ENST00000535005 DSCR8Q96T75 97 aa8.01□□□□□ -1.13
SCARB1-204ENST00000535005 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
SCARB1-204ENST00000535005 ZNF561-AS1K7EIQ3 104 aa8.01□□□□□ -1.13
SCARB1-204ENST00000535005 SLPIP03973 132 aa8.01□□□□□ -1.13
SCARB1-204ENST00000535005 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
SCARB1-204ENST00000535005 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
SCARB1-204ENST00000535005 DNAH11Q96DT5 4516 aa7.99□□□□□ -1.13
SCARB1-204ENST00000535005 Q5XG85 94 aa7.99□□□□□ -1.13
SCARB1-204ENST00000535005 OXTP01178 125 aa7.99□□□□□ -1.13
SCARB1-204ENST00000535005 CNBPP62633 177 aaKnown RBP7.99□□□□□ -1.13
SCARB1-204ENST00000535005 ATP5EP56381 51 aaPredicted RBP7.98□□□□□ -1.13
SCARB1-204ENST00000535005 CXCL6P80162 114 aa7.98□□□□□ -1.13
SCARB1-204ENST00000535005 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
SCARB1-204ENST00000535005 NDUFC1O43677 76 aa7.97□□□□□ -1.13
SCARB1-204ENST00000535005 RBM3P98179 157 aaKnown RBP7.97□□□□□ -1.13
SCARB1-204ENST00000535005 Q6ZQT0 140 aa7.97□□□□□ -1.13
SCARB1-204ENST00000535005 TRAV23DV6A0A075B6W5 121 aa7.96□□□□□ -1.13
SCARB1-204ENST00000535005 SYCNQ0VAF6 134 aa7.96□□□□□ -1.13
SCARB1-204ENST00000535005 LINC00575Q6W349 94 aa7.96□□□□□ -1.13
SCARB1-204ENST00000535005 CAMK2N2Q96S95 79 aa7.96□□□□□ -1.13
SCARB1-204ENST00000535005 UNQ6190/PRO20217Q6UXQ8 127 aa7.96□□□□□ -1.14
SCARB1-204ENST00000535005 PKD1P98161 4303 aa7.96□□□□□ -1.14
SCARB1-204ENST00000535005 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.95□□□□□ -1.14
SCARB1-204ENST00000535005 C10orf25Q5T742 122 aa7.95□□□□□ -1.14
SCARB1-204ENST00000535005 Q6ZRU5 148 aa7.95□□□□□ -1.14
SCARB1-204ENST00000535005 FAM19A1Q7Z5A9 133 aa7.95□□□□□ -1.14
SCARB1-204ENST00000535005 C20orf197Q8N268 126 aa7.95□□□□□ -1.14
SCARB1-204ENST00000535005 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
SCARB1-204ENST00000535005 C9orf163Q8N9P6 203 aa7.94□□□□□ -1.14
SCARB1-204ENST00000535005 C6orf48Q9UBA6 75 aa7.94□□□□□ -1.14
SCARB1-204ENST00000535005 H7BZZ5 65 aa7.93□□□□□ -1.14
SCARB1-204ENST00000535005 LINC01547P58512 204 aaPredicted RBP7.92□□□□□ -1.14
SCARB1-204ENST00000535005 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
SCARB1-204ENST00000535005 C6orf99Q4VX62 202 aa7.92□□□□□ -1.14
SCARB1-204ENST00000535005 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
SCARB1-204ENST00000535005 HECTD4Q9Y4D8 3996 aa7.91□□□□□ -1.14
SCARB1-204ENST00000535005 SMIM26A0A096LP01 95 aa7.91□□□□□ -1.14
SCARB1-204ENST00000535005 IGLV5-52A0A0A0MRZ9 124 aa7.91□□□□□ -1.14
SCARB1-204ENST00000535005 ERC2-IT1O76042 136 aa7.91□□□□□ -1.14
SCARB1-204ENST00000535005 TLX1NBP0CAT3 122 aa7.9□□□□□ -1.14
SCARB1-204ENST00000535005 HRCT1Q6UXD1 115 aa7.9□□□□□ -1.14
SCARB1-204ENST00000535005 Q6ZVQ6 151 aa7.9□□□□□ -1.14
SCARB1-204ENST00000535005 LAMTOR3Q9UHA4 124 aa7.89□□□□□ -1.15
SCARB1-204ENST00000535005 TRBV7-6A0A0J9YX20 115 aa7.89□□□□□ -1.15
SCARB1-204ENST00000535005 IGLV6-57P01721 117 aa7.89□□□□□ -1.15
SCARB1-204ENST00000535005 C9orf116Q5BN46 136 aaPredicted RBP7.89□□□□□ -1.15
SCARB1-204ENST00000535005 PKIGQ9Y2B9 76 aa7.89□□□□□ -1.15
SCARB1-204ENST00000535005 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
SCARB1-204ENST00000535005 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
SCARB1-204ENST00000535005 PRO0628Q9UI54 55 aa7.88□□□□□ -1.15
SCARB1-204ENST00000535005 FUSP35637 526 aaKnown RBP eCLIP7.87□□□□□ -1.156e-6■■■□□ 17.3
SCARB1-204ENST00000535005 TRBV7-4A0A0J9YYF1 115 aa7.85□□□□□ -1.15
SCARB1-204ENST00000535005 PRR3P79522 188 aaKnown RBP7.85□□□□□ -1.15
SCARB1-204ENST00000535005 HAMPP81172 84 aa7.85□□□□□ -1.15
SCARB1-204ENST00000535005 Q6ZRP5 223 aa7.85□□□□□ -1.15
SCARB1-204ENST00000535005 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
SCARB1-204ENST00000535005 DYNC1H1Q14204 4646 aaKnown RBP7.84□□□□□ -1.15
SCARB1-204ENST00000535005 C16orf90A8MZG2 172 aa7.84□□□□□ -1.15
SCARB1-204ENST00000535005 DIRC1Q969H9 104 aa7.84□□□□□ -1.15
SCARB1-204ENST00000535005 A0A096LNI7 61 aa7.82□□□□□ -1.16
SCARB1-204ENST00000535005 Q6ZQY7 126 aa7.82□□□□□ -1.16
SCARB1-204ENST00000535005 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
SCARB1-204ENST00000535005 KRTAP10-1P60331 282 aa7.82□□□□□ -1.16
SCARB1-204ENST00000535005 LINC00474Q9P2X8 69 aa7.82□□□□□ -1.16
SCARB1-204ENST00000535005 F8WEM9 126 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 283.7 ms