RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 PCP2Q8IVA1 136 aa2.9□□□□□ -1.95
USH1C-210ENST00000534556 ZNF815PA8K554 130 aa2.89□□□□□ -1.95
USH1C-210ENST00000534556 LINC00483Q53H64 154 aa2.89□□□□□ -1.95
USH1C-210ENST00000534556 LINC00304Q8N9R0 145 aa2.89□□□□□ -1.95
USH1C-210ENST00000534556 ST20-AS1Q8NBB2 130 aa2.89□□□□□ -1.95
USH1C-210ENST00000534556 HIST1H2BLQ99880 126 aa2.89□□□□□ -1.95
USH1C-210ENST00000534556 SPANXB1Q9NS25 103 aaPredicted RBP2.89□□□□□ -1.95
USH1C-210ENST00000534556 ETDCA0A1B0GVM5 59 aa2.88□□□□□ -1.95
USH1C-210ENST00000534556 LINC00587B1AMM8 73 aa2.88□□□□□ -1.95
USH1C-210ENST00000534556 TIMM17BO60830 172 aa2.88□□□□□ -1.95
USH1C-210ENST00000534556 Q6ZRX8 168 aa2.88□□□□□ -1.95
USH1C-210ENST00000534556 TRAV23DV6A0A075B6W5 121 aa2.87□□□□□ -1.95
USH1C-210ENST00000534556 GAGE2AQ6NT46 116 aa2.87□□□□□ -1.95
USH1C-210ENST00000534556 Q8NBF4 154 aa2.87□□□□□ -1.95
USH1C-210ENST00000534556 SPANXDQ9BXN6 97 aa2.87□□□□□ -1.95
USH1C-210ENST00000534556 SPANXCQ9NY87 97 aa2.87□□□□□ -1.95
USH1C-210ENST00000534556 ZNF73O43830 326 aaPredicted RBP2.86□□□□□ -1.95
USH1C-210ENST00000534556 S100A1P23297 94 aa2.86□□□□□ -1.95
USH1C-210ENST00000534556 SNRPEP62304 92 aaKnown RBP2.86□□□□□ -1.95
USH1C-210ENST00000534556 S100A7L2Q5SY68 101 aa2.86□□□□□ -1.95
USH1C-210ENST00000534556 MUSTN1Q8IVN3 82 aa2.86□□□□□ -1.95
USH1C-210ENST00000534556 MIEN1Q9BRT3 115 aa2.86□□□□□ -1.95
USH1C-210ENST00000534556 IGLV9-49A0A0B4J1Y8 123 aa2.85□□□□□ -1.95
USH1C-210ENST00000534556 C5orf52A6NGY3 159 aa2.85□□□□□ -1.95
USH1C-210ENST00000534556 LINC01547P58512 204 aaPredicted RBP2.85□□□□□ -1.95
USH1C-210ENST00000534556 MOBPQ13875 183 aa2.85□□□□□ -1.95
USH1C-210ENST00000534556 C6orf99Q4VX62 202 aa2.85□□□□□ -1.95
USH1C-210ENST00000534556 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
USH1C-210ENST00000534556 A0A0G2JQZ4 141 aa2.84□□□□□ -1.95
USH1C-210ENST00000534556 SPRR1BP22528 89 aa2.84□□□□□ -1.95
USH1C-210ENST00000534556 ELOF1P60002 83 aaKnown RBP2.84□□□□□ -1.95
USH1C-210ENST00000534556 SMIM29Q86T20 159 aa2.84□□□□□ -1.95
USH1C-210ENST00000534556 Q8N377 158 aa2.84□□□□□ -1.95
USH1C-210ENST00000534556 OR13C6PQ8NH95 151 aa2.84□□□□□ -1.95
USH1C-210ENST00000534556 ZNF706Q9Y5V0 76 aaPredicted RBP2.84□□□□□ -1.95
USH1C-210ENST00000534556 IGLV7-46A0A075B6I9 117 aa2.83□□□□□ -1.96
USH1C-210ENST00000534556 C20orf202A1L168 122 aa2.83□□□□□ -1.96
USH1C-210ENST00000534556 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
USH1C-210ENST00000534556 KRTAP13-3Q3SY46 172 aa2.83□□□□□ -1.96
USH1C-210ENST00000534556 SCGB1D4Q6XE38 83 aa2.83□□□□□ -1.96
USH1C-210ENST00000534556 SMIM11BQ8TCY0 68 aa2.83□□□□□ -1.96
USH1C-210ENST00000534556 IFITM1P13164 125 aa2.82□□□□□ -1.96
USH1C-210ENST00000534556 COX7BP24311 80 aa2.82□□□□□ -1.96
USH1C-210ENST00000534556 SPAG11AQ6PDA7 123 aa2.82□□□□□ -1.96
USH1C-210ENST00000534556 SSBP3-AS1Q7Z2R9 100 aa2.82□□□□□ -1.96
USH1C-210ENST00000534556 A4D1N5 150 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 SPINK1P00995 79 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 S100A2P29034 98 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 CTAG1AP78358 180 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 JOSD1Q15040 202 aaPredicted RBP2.81□□□□□ -1.96
USH1C-210ENST00000534556 Q1RN00 199 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 LCE2AQ5TA79 106 aaPredicted RBP2.81□□□□□ -1.96
USH1C-210ENST00000534556 C2orf91Q6ZV80 131 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 Q6ZVH6 145 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 LINC00518Q8N0U6 118 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
USH1C-210ENST00000534556 IGLV5-48A0A075B6I7 105 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 TRBV7-6A0A0J9YX20 115 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 A6NDN8 102 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 SCGB1D1O95968 90 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 S100A6P06703 90 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 COX8AP10176 69 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 S100A12P80511 92 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 C9orf153Q5TBE3 101 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 HRCT1Q6UXD1 115 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 DEFB105AQ8NG35 78 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 C14orf144Q96I85 54 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 C12orf57Q99622 126 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 DHRS4-AS1Q9P1J3 65 aa2.8□□□□□ -1.96
USH1C-210ENST00000534556 A0A1B0GWB2 263 aa2.79□□□□□ -1.96
USH1C-210ENST00000534556 RPS29P62273 56 aaKnown RBP2.79□□□□□ -1.96
USH1C-210ENST00000534556 C4orf48Q5BLP8 95 aa2.79□□□□□ -1.96
USH1C-210ENST00000534556 FP248Q71RG6 208 aaPredicted RBP2.79□□□□□ -1.96
USH1C-210ENST00000534556 CDIP1Q9H305 208 aa2.79□□□□□ -1.96
USH1C-210ENST00000534556 TRAV13-2A0A0B4J235 113 aa2.78□□□□□ -1.96
USH1C-210ENST00000534556 H7C2G1 150 aa2.78□□□□□ -1.96
USH1C-210ENST00000534556 CFC1BP0CG36 223 aa2.78□□□□□ -1.96
USH1C-210ENST00000534556 CFC1P0CG37 223 aa2.78□□□□□ -1.96
USH1C-210ENST00000534556 SPATA45Q537H7 98 aa2.78□□□□□ -1.96
USH1C-210ENST00000534556 XP32Q5T750 250 aa2.78□□□□□ -1.96
USH1C-210ENST00000534556 LINC00575Q6W349 94 aa2.78□□□□□ -1.96
USH1C-210ENST00000534556 PAM16Q9Y3D7 125 aa2.78□□□□□ -1.96
USH1C-210ENST00000534556 FLGP20930 4061 aaPredicted RBP2.78□□□□□ -1.97
USH1C-210ENST00000534556 TEX49A0A1B0GTD5 131 aa2.77□□□□□ -1.97
USH1C-210ENST00000534556 DLEU1O43261 78 aa2.77□□□□□ -1.97
USH1C-210ENST00000534556 HINT1P49773 126 aaPredicted RBP2.77□□□□□ -1.97
USH1C-210ENST00000534556 AKR1D1P51857 326 aa2.77□□□□□ -1.97
USH1C-210ENST00000534556 TAL2Q16559 108 aa2.77□□□□□ -1.97
USH1C-210ENST00000534556 ASB16-AS1Q495Z4 193 aa2.77□□□□□ -1.97
USH1C-210ENST00000534556 PYY3Q5JQD4 70 aa2.77□□□□□ -1.97
USH1C-210ENST00000534556 FAM218AQ96MZ4 157 aa2.77□□□□□ -1.97
USH1C-210ENST00000534556 CBY1Q9Y3M2 126 aa2.77□□□□□ -1.97
USH1C-210ENST00000534556 HSBP1L1C9JCN9 74 aa2.76□□□□□ -1.97
USH1C-210ENST00000534556 SLC25A20O43772 301 aa2.76□□□□□ -1.97
USH1C-210ENST00000534556 FXYD2P54710 66 aa2.76□□□□□ -1.97
USH1C-210ENST00000534556 KRTAP19-2Q3LHN2 52 aa2.76□□□□□ -1.97
USH1C-210ENST00000534556 LCE2CQ5TA81 110 aa2.76□□□□□ -1.97
USH1C-210ENST00000534556 C1orf195Q5TG92 126 aa2.76□□□□□ -1.97
USH1C-210ENST00000534556 Q6ZQY7 126 aa2.76□□□□□ -1.97
USH1C-210ENST00000534556 HIST1H4GQ99525 98 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms