RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 A8MUU9 505 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 H0YGX0 51 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 IGHV1-69P01742 117 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 SAA2P0DJI9 122 aaPredicted RBP2.15□□□□□ -2.07
CSMD3-210ENST00000534172 ELOF1P60002 83 aaKnown RBP2.15□□□□□ -2.07
CSMD3-210ENST00000534172 MOBPQ13875 183 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 C10orf128Q5T292 105 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 CSMD1Q96PZ7 3565 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 CSMD2Q7Z408 3487 aa2.15□□□□□ -2.07
CSMD3-210ENST00000534172 INTS1Q8N201 2190 aaKnown RBP2.14□□□□□ -2.07
CSMD3-210ENST00000534172 TRAV10A0A0B4J240 114 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 TRAV21A0A0B4J279 112 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 LY6HO94772 140 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 CTSGP08311 255 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 PRB4P10163 310 aaPredicted RBP2.14□□□□□ -2.07
CSMD3-210ENST00000534172 CNEP1R1Q8N9A8 125 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 MED12Q93074 2177 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 BSNQ9UPA5 3926 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 ZGRF1Q86YA3 2104 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 NDUFB1O75438 58 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 CRIP1P50238 77 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 WFDC9Q8NEX5 89 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 ORMDL1Q9P0S3 153 aa2.14□□□□□ -2.07
CSMD3-210ENST00000534172 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 IGKV3-11P04433 115 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 PRCDQ00LT1 54 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 FAM74A4Q5TZK3 123 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 SPANXA2-OT1Q8N9U9 137 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 SMR3AQ99954 134 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 PRR15LQ9BU68 103 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 XAGE1AQ9HD64 81 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 KLK12Q9UKR0 248 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 DSCAMO60469 2012 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 PDE6GP18545 87 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 LINC00483Q53H64 154 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 Q8N814 137 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 ZNF625Q96I27 306 aaPredicted RBP2.13□□□□□ -2.07
CSMD3-210ENST00000534172 Q9BRP9 147 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 DSCAML1Q8TD84 2053 aa2.13□□□□□ -2.07
CSMD3-210ENST00000534172 LCE6AA0A183 80 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 KRTAP13-3Q3SY46 172 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 CUBNO60494 3623 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 MAP1AP78559 2803 aaPredicted RBP2.12□□□□□ -2.07
CSMD3-210ENST00000534172 IGKV1D-37A0A075B6S9 117 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 LOC110117498A0A087WWA1 95 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 PLXNB1O43157 2135 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 IGLV1-51P01701 117 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 CD52P31358 61 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 LINC00467Q9BRT7 94 aa2.12□□□□□ -2.07
CSMD3-210ENST00000534172 DNAH1Q9P2D7 4330 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 F5P12259 2224 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 IGHV3-73A0A0B4J1V6 119 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 TRBV6-5A0A0K0K1A5 114 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 LRCOL1A6NCL2 159 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 NCR3O14931 201 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 ERHP84090 104 aaKnown RBP2.11□□□□□ -2.07
CSMD3-210ENST00000534172 FDCSPQ8NFU4 85 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 LINC00308Q8TCZ7 52 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 S4R3C0 116 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 ARFGEF3Q5TH69 2177 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 FREM1Q5H8C1 2179 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 H3BQ85 93 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 NDUFA1O15239 70 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 HCP5Q6MZN7 132 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 NDUFA4L2Q9NRX3 87 aa2.11□□□□□ -2.07
CSMD3-210ENST00000534172 IGHV1-18A0A0C4DH31 117 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 TRBV10-1A0A0K0K1A3 114 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 ARHGAP32A7KAX9 2087 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 B4DSR2 109 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 CRPP02741 224 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 DEFB134Q4QY38 66 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 DCHS2Q6V1P9 2916 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 KNTC1P50748 2209 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 LAMA1P25391 3075 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 STATHP02808 62 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 HAMPP81172 84 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 MUC7Q8TAX7 377 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 ZCCHC13Q8WW36 166 aaKnown RBP2.1□□□□□ -2.07
CSMD3-210ENST00000534172 HIGD2AQ9BW72 106 aa2.1□□□□□ -2.07
CSMD3-210ENST00000534172 PRKDCP78527 4128 aaKnown RBP2.09□□□□□ -2.07
CSMD3-210ENST00000534172 TFF1P04155 84 aa2.09□□□□□ -2.07
CSMD3-210ENST00000534172 DEFB114Q30KQ6 69 aa2.09□□□□□ -2.07
CSMD3-210ENST00000534172 FAM27BQ5VT28 67 aa2.09□□□□□ -2.07
CSMD3-210ENST00000534172 LINC00208Q96KT6 92 aa2.09□□□□□ -2.07
CSMD3-210ENST00000534172 IGLV4-60A0A075B6I1 120 aa2.09□□□□□ -2.08
CSMD3-210ENST00000534172 RTL8CO15255 209 aa2.09□□□□□ -2.08
CSMD3-210ENST00000534172 IGLV7-43P04211 117 aa2.09□□□□□ -2.08
CSMD3-210ENST00000534172 ROMO1P60602 79 aa2.09□□□□□ -2.08
CSMD3-210ENST00000534172 C1orf134Q5TEV5 83 aa2.09□□□□□ -2.08
CSMD3-210ENST00000534172 Q6ZQT0 140 aa2.09□□□□□ -2.08
CSMD3-210ENST00000534172 KLK9Q9UKQ9 250 aa2.09□□□□□ -2.08
CSMD3-210ENST00000534172 IGKV2D-24A0A075B6R9 120 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 IGHV3-15A0A0B4J1V0 119 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 IGKV2-29A2NJV5 120 aaPredicted RBP2.08□□□□□ -2.08
CSMD3-210ENST00000534172 NNATQ16517 81 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 ST20-AS1Q8NBB2 130 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 UNC13CQ8NB66 2214 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 ALPK2Q86TB3 2170 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 MUC4Q99102 2169 aa2.08□□□□□ -2.08
CSMD3-210ENST00000534172 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms