RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 CCKP06307 115 aa18.31■□□□□ 0.52
SAMD1-202ENST00000533683 LINC00643Q86TS7 51 aa18.31■□□□□ 0.52
SAMD1-202ENST00000533683 H3BQ85 93 aa18.29■□□□□ 0.52
SAMD1-202ENST00000533683 LAMTOR3Q9UHA4 124 aa18.29■□□□□ 0.52
SAMD1-202ENST00000533683 CNBPP62633 177 aaKnown RBP18.28■□□□□ 0.52
SAMD1-202ENST00000533683 RPL37AP8A6NKH3 93 aa18.28■□□□□ 0.52
SAMD1-202ENST00000533683 TRBV7-7A0A0K0K1E9 115 aa18.27■□□□□ 0.51
SAMD1-202ENST00000533683 LINC00846Q9NV44 126 aa18.27■□□□□ 0.51
SAMD1-202ENST00000533683 IGLV1-50A0A075B6I6 118 aa18.26■□□□□ 0.51
SAMD1-202ENST00000533683 NBDYA0A0U1RRE5 68 aa18.26■□□□□ 0.51
SAMD1-202ENST00000533683 FAM19A5Q7Z5A7 132 aaPredicted RBP18.26■□□□□ 0.51
SAMD1-202ENST00000533683 RBM3P98179 157 aaKnown RBP18.25■□□□□ 0.51
SAMD1-202ENST00000533683 STARD9Q9P2P6 4700 aa18.23■□□□□ 0.51
SAMD1-202ENST00000533683 B5MCH6 92 aa18.23■□□□□ 0.51
SAMD1-202ENST00000533683 MRPL55Q7Z7F7 128 aaKnown RBP18.22■□□□□ 0.51
SAMD1-202ENST00000533683 PRYO14603 147 aa18.21■□□□□ 0.51
SAMD1-202ENST00000533683 GHRHP01286 108 aa18.21■□□□□ 0.51
SAMD1-202ENST00000533683 C14orf177Q52M58 125 aa18.21■□□□□ 0.51
SAMD1-202ENST00000533683 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.2■□□□□ 0.5
SAMD1-202ENST00000533683 A0A096LNI7 61 aa18.2■□□□□ 0.5
SAMD1-202ENST00000533683 KRTAP4-16G5E9R7 235 aaPredicted RBP18.19■□□□□ 0.5
SAMD1-202ENST00000533683 C16orf90A8MZG2 172 aa18.18■□□□□ 0.5
SAMD1-202ENST00000533683 Q6ZQT0 140 aa18.18■□□□□ 0.5
SAMD1-202ENST00000533683 LOC110117498A0A087WWA1 95 aa18.18■□□□□ 0.5
SAMD1-202ENST00000533683 SPRR1AP35321 89 aa18.18■□□□□ 0.5
SAMD1-202ENST00000533683 IGKV2-24A0A0C4DH68 120 aa18.15■□□□□ 0.5
SAMD1-202ENST00000533683 LRCOL1A6NCL2 159 aa18.15■□□□□ 0.5
SAMD1-202ENST00000533683 IMUPQ9GZP8 106 aa18.15■□□□□ 0.5
SAMD1-202ENST00000533683 Q6ZRX8 168 aa18.15■□□□□ 0.5
SAMD1-202ENST00000533683 VPS13DQ5THJ4 4388 aa18.14■□□□□ 0.5
SAMD1-202ENST00000533683 Q6ZRN7 208 aaPredicted RBP18.14■□□□□ 0.49
SAMD1-202ENST00000533683 SMIM20Q8N5G0 67 aa18.14■□□□□ 0.49
SAMD1-202ENST00000533683 DSCR8Q96T75 97 aa18.14■□□□□ 0.49
SAMD1-202ENST00000533683 ETDCA0A1B0GVM5 59 aa18.11■□□□□ 0.49
SAMD1-202ENST00000533683 Q9BRP9 147 aa18.11■□□□□ 0.49
SAMD1-202ENST00000533683 DHRS4-AS1Q9P1J3 65 aa18.1■□□□□ 0.49
SAMD1-202ENST00000533683 A0A1W2PNN7 141 aa18.1■□□□□ 0.49
SAMD1-202ENST00000533683 CCDC179H3BU77 68 aa18.1■□□□□ 0.49
SAMD1-202ENST00000533683 M0R2N4 97 aa18.08■□□□□ 0.48
SAMD1-202ENST00000533683 TRBV7-4A0A0J9YYF1 115 aa18.07■□□□□ 0.48
SAMD1-202ENST00000533683 PDE6GP18545 87 aa18.07■□□□□ 0.48
SAMD1-202ENST00000533683 Q6JHZ5 121 aa18.07■□□□□ 0.48
SAMD1-202ENST00000533683 C9orf163Q8N9P6 203 aa18.05■□□□□ 0.48
SAMD1-202ENST00000533683 REG3GQ6UW15 175 aa18.04■□□□□ 0.48
SAMD1-202ENST00000533683 IGKV3D-7A0A0C4DH55 119 aa18.04■□□□□ 0.48
SAMD1-202ENST00000533683 FAM236AA0A1B0GUQ0 79 aa18.04■□□□□ 0.48
SAMD1-202ENST00000533683 FAM236BA0A1B0GV22 79 aa18.04■□□□□ 0.48
SAMD1-202ENST00000533683 DEFB105AQ8NG35 78 aa18.04■□□□□ 0.48
SAMD1-202ENST00000533683 Q8N377 158 aa18.03■□□□□ 0.48
SAMD1-202ENST00000533683 CHTF8P0CG12 524 aa18.03■□□□□ 0.48
SAMD1-202ENST00000533683 LINC01547P58512 204 aaPredicted RBP18.02■□□□□ 0.48
SAMD1-202ENST00000533683 UBL5Q9BZL1 73 aa17.98■□□□□ 0.47
SAMD1-202ENST00000533683 ERC2-IT1O76042 136 aa17.96■□□□□ 0.47
SAMD1-202ENST00000533683 UBE2BP63146 152 aa17.96■□□□□ 0.46
SAMD1-202ENST00000533683 ST20-AS1Q8NBB2 130 aa17.96■□□□□ 0.46
SAMD1-202ENST00000533683 FBN3Q75N90 2809 aa17.93■□□□□ 0.46
SAMD1-202ENST00000533683 IGLV5-48A0A075B6I7 105 aa17.92■□□□□ 0.46
SAMD1-202ENST00000533683 PKIGQ9Y2B9 76 aa17.91■□□□□ 0.46
SAMD1-202ENST00000533683 PHF5AQ7RTV0 110 aaKnown RBP17.91■□□□□ 0.46
SAMD1-202ENST00000533683 Q6ZR54 194 aa17.9■□□□□ 0.46
SAMD1-202ENST00000533683 C3orf22Q8N5N4 141 aa17.9■□□□□ 0.46
SAMD1-202ENST00000533683 ATP5EP2Q5VTU8 51 aa17.9■□□□□ 0.46
SAMD1-202ENST00000533683 KMT2AQ03164 3969 aa17.89■□□□□ 0.45
SAMD1-202ENST00000533683 A0A087WTM6 91 aa17.88■□□□□ 0.45
SAMD1-202ENST00000533683 KRTAP11-1Q8IUC1 163 aa17.88■□□□□ 0.45
SAMD1-202ENST00000533683 FAM19A1Q7Z5A9 133 aa17.87■□□□□ 0.45
SAMD1-202ENST00000533683 C5orf47Q569G3 176 aa17.87■□□□□ 0.45
SAMD1-202ENST00000533683 Q6ZVQ6 151 aa17.87■□□□□ 0.45
SAMD1-202ENST00000533683 LINC00474Q9P2X8 69 aa17.87■□□□□ 0.45
SAMD1-202ENST00000533683 PANO1I0J062 215 aa17.86■□□□□ 0.45
SAMD1-202ENST00000533683 PRLHP81277 87 aa17.86■□□□□ 0.45
SAMD1-202ENST00000533683 HIST1H4AP62805 103 aaKnown RBP17.84■□□□□ 0.45
SAMD1-202ENST00000533683 A0A087WVE0 104 aa17.84■□□□□ 0.45
SAMD1-202ENST00000533683 KRTAP21-3Q3LHN1 58 aa17.84■□□□□ 0.45
SAMD1-202ENST00000533683 TGP01266 2768 aa17.82■□□□□ 0.44
SAMD1-202ENST00000533683 TNP2Q05952 138 aa17.81■□□□□ 0.44
SAMD1-202ENST00000533683 DNAH2Q9P225 4427 aa17.8■□□□□ 0.44
SAMD1-202ENST00000533683 HAMPP81172 84 aa17.77■□□□□ 0.44
SAMD1-202ENST00000533683 FUSP35637 526 aaKnown RBP eCLIP17.77■□□□□ 0.43
SAMD1-202ENST00000533683 DPH3Q96FX2 82 aa17.76■□□□□ 0.43
SAMD1-202ENST00000533683 HIGD2AQ9BW72 106 aa17.76■□□□□ 0.43
SAMD1-202ENST00000533683 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.76■□□□□ 0.43
SAMD1-202ENST00000533683 HECTD4Q9Y4D8 3996 aa17.76■□□□□ 0.43
SAMD1-202ENST00000533683 SPACA4Q8TDM5 124 aa17.75■□□□□ 0.43
SAMD1-202ENST00000533683 SMIM29Q86T20 159 aa17.74■□□□□ 0.43
SAMD1-202ENST00000533683 C1orf137Q5JT78 98 aa17.72■□□□□ 0.43
SAMD1-202ENST00000533683 LY6G6CO95867 125 aa17.72■□□□□ 0.43
SAMD1-202ENST00000533683 EPM2AB3EWF7 344 aa17.71■□□□□ 0.43
SAMD1-202ENST00000533683 RTL8CO15255 209 aa17.71■□□□□ 0.43
SAMD1-202ENST00000533683 C1orf134Q5TEV5 83 aa17.71■□□□□ 0.43
SAMD1-202ENST00000533683 H0Y9J4 135 aa17.7■□□□□ 0.42
SAMD1-202ENST00000533683 ATOX1O00244 68 aa17.7■□□□□ 0.42
SAMD1-202ENST00000533683 UQCRQO14949 82 aa17.69■□□□□ 0.42
SAMD1-202ENST00000533683 CXCL6P80162 114 aa17.69■□□□□ 0.42
SAMD1-202ENST00000533683 A0A1W2PNM2 257 aa17.69■□□□□ 0.42
SAMD1-202ENST00000533683 C3orf84H3BNL1 204 aa17.67■□□□□ 0.42
SAMD1-202ENST00000533683 DNAH17Q9UFH2 4485 aa17.67■□□□□ 0.42
SAMD1-202ENST00000533683 COX7CP15954 63 aa17.66■□□□□ 0.42
SAMD1-202ENST00000533683 SRRM2Q9UQ35 2752 aaKnown RBP17.65■□□□□ 0.42
SAMD1-202ENST00000533683 C9orf153Q5TBE3 101 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms