RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 C22orf24Q9Y442 160 aa11.9□□□□□ -0.51
SMPD1-208ENST00000533123 VPREB1P12018 145 aa11.89□□□□□ -0.51
SMPD1-208ENST00000533123 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
SMPD1-208ENST00000533123 PKD1P98161 4303 aa11.89□□□□□ -0.51
SMPD1-208ENST00000533123 BAALC-AS2P0C853 105 aa11.87□□□□□ -0.51
SMPD1-208ENST00000533123 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
SMPD1-208ENST00000533123 C9orf163Q8N9P6 203 aa11.87□□□□□ -0.51
SMPD1-208ENST00000533123 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
SMPD1-208ENST00000533123 KRTAP10-2P60368 255 aa11.87□□□□□ -0.51
SMPD1-208ENST00000533123 A0A087WYN8 130 aa11.86□□□□□ -0.51
SMPD1-208ENST00000533123 FAM236AA0A1B0GUQ0 79 aa11.86□□□□□ -0.51
SMPD1-208ENST00000533123 FAM236BA0A1B0GV22 79 aa11.86□□□□□ -0.51
SMPD1-208ENST00000533123 IGLV6-57P01721 117 aa11.86□□□□□ -0.51
SMPD1-208ENST00000533123 LINC00336Q6ZUF6 198 aa11.86□□□□□ -0.51
SMPD1-208ENST00000533123 LINC00643Q86TS7 51 aa11.86□□□□□ -0.51
SMPD1-208ENST00000533123 IGLV5-52A0A0A0MRZ9 124 aa11.85□□□□□ -0.51
SMPD1-208ENST00000533123 TRBV10-3A0A0K0K1G6 114 aa11.85□□□□□ -0.51
SMPD1-208ENST00000533123 C6orf99Q4VX62 202 aa11.84□□□□□ -0.51
SMPD1-208ENST00000533123 DNAH5Q8TE73 4624 aa11.84□□□□□ -0.51
SMPD1-208ENST00000533123 SERTAD4-AS1Q5TG53 156 aa11.83□□□□□ -0.52
SMPD1-208ENST00000533123 SMIM20Q8N5G0 67 aa11.83□□□□□ -0.52
SMPD1-208ENST00000533123 LOC107984640A0A0U1RRK4 108 aa11.83□□□□□ -0.52
SMPD1-208ENST00000533123 H0YGX0 51 aa11.83□□□□□ -0.52
SMPD1-208ENST00000533123 FAM168BA1KXE4 195 aa11.82□□□□□ -0.52
SMPD1-208ENST00000533123 A0A096LNI7 61 aa11.8□□□□□ -0.52
SMPD1-208ENST00000533123 M0R378 163 aa11.8□□□□□ -0.52
SMPD1-208ENST00000533123 IGKV2-24A0A0C4DH68 120 aa11.79□□□□□ -0.52
SMPD1-208ENST00000533123 INAFM2P0DMQ5 153 aa11.79□□□□□ -0.52
SMPD1-208ENST00000533123 PKHD1P08F94 4074 aa11.79□□□□□ -0.52
SMPD1-208ENST00000533123 TRAV23DV6A0A075B6W5 121 aa11.79□□□□□ -0.52
SMPD1-208ENST00000533123 CHTF8P0CG12 524 aa11.78□□□□□ -0.52
SMPD1-208ENST00000533123 C16orf90A8MZG2 172 aa11.77□□□□□ -0.53
SMPD1-208ENST00000533123 KRTAP7-1Q8IUC3 87 aa11.77□□□□□ -0.53
SMPD1-208ENST00000533123 GAGE2AQ6NT46 116 aa11.76□□□□□ -0.53
SMPD1-208ENST00000533123 NKAPP1Q8N9T2 125 aa11.76□□□□□ -0.53
SMPD1-208ENST00000533123 DNAL4O96015 105 aa11.75□□□□□ -0.53
SMPD1-208ENST00000533123 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
SMPD1-208ENST00000533123 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
SMPD1-208ENST00000533123 PLA2G2DQ9UNK4 145 aa11.75□□□□□ -0.53
SMPD1-208ENST00000533123 ZNF73O43830 326 aaPredicted RBP11.74□□□□□ -0.53
SMPD1-208ENST00000533123 FAM19A5Q7Z5A7 132 aaPredicted RBP11.74□□□□□ -0.53
SMPD1-208ENST00000533123 C3orf22Q8N5N4 141 aa11.74□□□□□ -0.53
SMPD1-208ENST00000533123 PANO1I0J062 215 aa11.74□□□□□ -0.53
SMPD1-208ENST00000533123 DIRC1Q969H9 104 aa11.74□□□□□ -0.53
SMPD1-208ENST00000533123 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
SMPD1-208ENST00000533123 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.72□□□□□ -0.53
SMPD1-208ENST00000533123 UQCRQO14949 82 aa11.72□□□□□ -0.53
SMPD1-208ENST00000533123 C9orf153Q5TBE3 101 aa11.71□□□□□ -0.53
SMPD1-208ENST00000533123 LINC00575Q6W349 94 aa11.71□□□□□ -0.54
SMPD1-208ENST00000533123 IGLV5-37A0A075B6J1 123 aa11.7□□□□□ -0.54
SMPD1-208ENST00000533123 RPL37AP8A6NKH3 93 aa11.7□□□□□ -0.54
SMPD1-208ENST00000533123 DPH3Q96FX2 82 aa11.7□□□□□ -0.54
SMPD1-208ENST00000533123 OBSCN-AS1Q96MR7 158 aa11.7□□□□□ -0.54
SMPD1-208ENST00000533123 KRTAP10-1P60331 282 aa11.69□□□□□ -0.54
SMPD1-208ENST00000533123 HIST1H4AP62805 103 aaKnown RBP11.69□□□□□ -0.54
SMPD1-208ENST00000533123 C14orf132Q9NPU4 83 aa11.69□□□□□ -0.54
SMPD1-208ENST00000533123 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
SMPD1-208ENST00000533123 LINC00474Q9P2X8 69 aa11.68□□□□□ -0.54
SMPD1-208ENST00000533123 SPACA4Q8TDM5 124 aa11.68□□□□□ -0.54
SMPD1-208ENST00000533123 A0A1B0GX51 115 aa11.67□□□□□ -0.54
SMPD1-208ENST00000533123 COX7BP24311 80 aa11.67□□□□□ -0.54
SMPD1-208ENST00000533123 LINC00167Q96N53 147 aa11.67□□□□□ -0.54
SMPD1-208ENST00000533123 KCNQ1DNQ9H478 68 aa11.67□□□□□ -0.54
SMPD1-208ENST00000533123 ELOF1P60002 83 aaKnown RBP11.66□□□□□ -0.54
SMPD1-208ENST00000533123 MRPL55Q7Z7F7 128 aaKnown RBP11.66□□□□□ -0.54
SMPD1-208ENST00000533123 FAM30AQ9NZY2 134 aa11.66□□□□□ -0.54
SMPD1-208ENST00000533123 LRP1BQ9NZR2 4599 aa11.66□□□□□ -0.54
SMPD1-208ENST00000533123 hADV29S1A0JD25 119 aa11.66□□□□□ -0.54
SMPD1-208ENST00000533123 COX7CP15954 63 aa11.66□□□□□ -0.54
SMPD1-208ENST00000533123 ORMDL1Q9P0S3 153 aa11.66□□□□□ -0.54
SMPD1-208ENST00000533123 IGLV1-50A0A075B6I6 118 aa11.64□□□□□ -0.55
SMPD1-208ENST00000533123 DNAH8Q96JB1 4490 aa11.64□□□□□ -0.55
SMPD1-208ENST00000533123 LINC00846Q9NV44 126 aa11.64□□□□□ -0.55
SMPD1-208ENST00000533123 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
SMPD1-208ENST00000533123 TRBV7-6A0A0J9YX20 115 aa11.63□□□□□ -0.55
SMPD1-208ENST00000533123 ATOX1O00244 68 aa11.63□□□□□ -0.55
SMPD1-208ENST00000533123 Q6JHZ5 121 aa11.62□□□□□ -0.55
SMPD1-208ENST00000533123 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
SMPD1-208ENST00000533123 IGKV3D-7A0A0C4DH55 119 aa11.6□□□□□ -0.55
SMPD1-208ENST00000533123 CRYGAP11844 174 aa11.6□□□□□ -0.55
SMPD1-208ENST00000533123 Q6ZQY7 126 aa11.6□□□□□ -0.55
SMPD1-208ENST00000533123 Q6ZSA8 131 aa11.6□□□□□ -0.55
SMPD1-208ENST00000533123 PRYO14603 147 aa11.59□□□□□ -0.55
SMPD1-208ENST00000533123 HAMPP81172 84 aa11.58□□□□□ -0.56
SMPD1-208ENST00000533123 PHF5AQ7RTV0 110 aaKnown RBP11.58□□□□□ -0.56
SMPD1-208ENST00000533123 KRTAP4-16G5E9R7 235 aaPredicted RBP11.57□□□□□ -0.56
SMPD1-208ENST00000533123 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
SMPD1-208ENST00000533123 SPRR1AP35321 89 aa11.56□□□□□ -0.56
SMPD1-208ENST00000533123 CIRBP-AS1Q8TBR5 109 aa11.56□□□□□ -0.56
SMPD1-208ENST00000533123 A0A087WVE0 104 aa11.55□□□□□ -0.56
SMPD1-208ENST00000533123 EPM2AB3EWF7 344 aa11.55□□□□□ -0.56
SMPD1-208ENST00000533123 TMEM256-PLSCR3K7ERE1 68 aa11.55□□□□□ -0.56
SMPD1-208ENST00000533123 SCXQ7RTU7 201 aa11.55□□□□□ -0.56
SMPD1-208ENST00000533123 CYSTM1Q9H1C7 97 aa11.54□□□□□ -0.56
SMPD1-208ENST00000533123 ETDCA0A1B0GVM5 59 aa11.54□□□□□ -0.56
SMPD1-208ENST00000533123 CCKP06307 115 aa11.54□□□□□ -0.56
SMPD1-208ENST00000533123 Q6ZRX8 168 aa11.54□□□□□ -0.56
SMPD1-208ENST00000533123 REG3GQ6UW15 175 aa11.52□□□□□ -0.56
SMPD1-208ENST00000533123 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.52□□□□□ -0.56
SMPD1-208ENST00000533123 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms