RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 MIR22HGQ0VDD5 57 aa7.14□□□□□ -1.27
COLCA1-203ENST00000532918 ST20-AS1Q8NBB2 130 aa7.14□□□□□ -1.27
COLCA1-203ENST00000532918 LOC110117498A0A087WWA1 95 aa7.14□□□□□ -1.27
COLCA1-203ENST00000532918 Q6ZQT0 140 aa7.14□□□□□ -1.27
COLCA1-203ENST00000532918 PRR34Q9NV39 138 aa7.14□□□□□ -1.27
COLCA1-203ENST00000532918 ZNF861PO60384 105 aa7.14□□□□□ -1.27
COLCA1-203ENST00000532918 ACANP16112 2415 aa7.13□□□□□ -1.27
COLCA1-203ENST00000532918 IGLV1-50A0A075B6I6 118 aa7.13□□□□□ -1.27
COLCA1-203ENST00000532918 C9orf163Q8N9P6 203 aa7.13□□□□□ -1.27
COLCA1-203ENST00000532918 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
COLCA1-203ENST00000532918 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
COLCA1-203ENST00000532918 KCNQ1DNQ9H478 68 aa7.11□□□□□ -1.27
COLCA1-203ENST00000532918 ZNF575Q86XF7 245 aa7.1□□□□□ -1.27
COLCA1-203ENST00000532918 LUZP6Q538Z0 58 aa7.1□□□□□ -1.27
COLCA1-203ENST00000532918 RBM12B-AS1Q9P1G2 102 aa7.1□□□□□ -1.27
COLCA1-203ENST00000532918 WDR87Q6ZQQ6 2873 aa7.1□□□□□ -1.27
COLCA1-203ENST00000532918 FAM168BA1KXE4 195 aa7.09□□□□□ -1.27
COLCA1-203ENST00000532918 FAM218AQ96MZ4 157 aa7.09□□□□□ -1.27
COLCA1-203ENST00000532918 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
COLCA1-203ENST00000532918 GIG44P09565 113 aaPredicted RBP7.09□□□□□ -1.27
COLCA1-203ENST00000532918 SMR3BP02814 79 aaPredicted RBP7.08□□□□□ -1.28
COLCA1-203ENST00000532918 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
COLCA1-203ENST00000532918 C15orf56Q8N910 161 aa7.08□□□□□ -1.28
COLCA1-203ENST00000532918 KLKP1Q107X0 134 aa7.07□□□□□ -1.28
COLCA1-203ENST00000532918 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
COLCA1-203ENST00000532918 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
COLCA1-203ENST00000532918 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
COLCA1-203ENST00000532918 A8MWP4 228 aa7.05□□□□□ -1.28
COLCA1-203ENST00000532918 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
COLCA1-203ENST00000532918 FLNBO75369 2602 aaKnown RBP7.04□□□□□ -1.28
COLCA1-203ENST00000532918 PRR15Q8IV56 129 aa7.04□□□□□ -1.28
COLCA1-203ENST00000532918 MRPL34Q9BQ48 92 aaKnown RBP7.04□□□□□ -1.28
COLCA1-203ENST00000532918 CASC10Q5T4H9 136 aa7.02□□□□□ -1.29
COLCA1-203ENST00000532918 CDC42SE1Q9NRR8 79 aa7.02□□□□□ -1.29
COLCA1-203ENST00000532918 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
COLCA1-203ENST00000532918 H7BZZ5 65 aa7□□□□□ -1.29
COLCA1-203ENST00000532918 HECTD1Q9ULT8 2610 aa7□□□□□ -1.29
COLCA1-203ENST00000532918 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
COLCA1-203ENST00000532918 KRTAP16-1A8MUX0 517 aa6.99□□□□□ -1.29
COLCA1-203ENST00000532918 LITAFQ99732 161 aa6.98□□□□□ -1.29
COLCA1-203ENST00000532918 K7EQZ3 153 aa6.97□□□□□ -1.29
COLCA1-203ENST00000532918 IGFL1Q6UW32 110 aa6.97□□□□□ -1.29
COLCA1-203ENST00000532918 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
COLCA1-203ENST00000532918 C9orf92A6NGG3 77 aa6.95□□□□□ -1.3
COLCA1-203ENST00000532918 DSCR10P59022 87 aa6.95□□□□□ -1.3
COLCA1-203ENST00000532918 OBSCN-AS1Q96MR7 158 aa6.95□□□□□ -1.3
COLCA1-203ENST00000532918 SPRR4Q96PI1 79 aa6.95□□□□□ -1.3
COLCA1-203ENST00000532918 A0A1B0GVX0 72 aa6.94□□□□□ -1.3
COLCA1-203ENST00000532918 TNP2Q05952 138 aa6.94□□□□□ -1.3
COLCA1-203ENST00000532918 C8orf17Q9NRJ1 99 aa6.94□□□□□ -1.3
COLCA1-203ENST00000532918 A0A1W2PNN7 141 aa6.93□□□□□ -1.3
COLCA1-203ENST00000532918 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
COLCA1-203ENST00000532918 IGLV5-37A0A075B6J1 123 aa6.92□□□□□ -1.3
COLCA1-203ENST00000532918 Q1T7F1 81 aa6.91□□□□□ -1.3
COLCA1-203ENST00000532918 Q8N377 158 aa6.89□□□□□ -1.31
COLCA1-203ENST00000532918 SPANXA2-OT1Q8N9U9 137 aa6.88□□□□□ -1.31
COLCA1-203ENST00000532918 ANAPC11Q9NYG5 84 aa6.86□□□□□ -1.31
COLCA1-203ENST00000532918 MGAM2Q2M2H8 2515 aa6.86□□□□□ -1.31
COLCA1-203ENST00000532918 Q6ZSA8 131 aa6.85□□□□□ -1.31
COLCA1-203ENST00000532918 FAM104AQ969W3 186 aa6.84□□□□□ -1.31
COLCA1-203ENST00000532918 FAM229BQ4G0N7 80 aa6.84□□□□□ -1.31
COLCA1-203ENST00000532918 CENPFP49454 3210 aa6.84□□□□□ -1.31
COLCA1-203ENST00000532918 HELZ2Q9BYK8 2649 aaKnown RBP6.83□□□□□ -1.32
COLCA1-203ENST00000532918 A0A0D9SG42 100 aa6.83□□□□□ -1.32
COLCA1-203ENST00000532918 LCE6AA0A183 80 aa6.82□□□□□ -1.32
COLCA1-203ENST00000532918 PLAC8Q9NZF1 115 aa6.79□□□□□ -1.32
COLCA1-203ENST00000532918 LINC00483Q53H64 154 aa6.78□□□□□ -1.32
COLCA1-203ENST00000532918 PRR26Q8N8Z3 221 aa6.77□□□□□ -1.32
COLCA1-203ENST00000532918 IGLV5-48A0A075B6I7 105 aa6.77□□□□□ -1.33
COLCA1-203ENST00000532918 Q75L30 129 aa6.77□□□□□ -1.33
COLCA1-203ENST00000532918 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
COLCA1-203ENST00000532918 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
COLCA1-203ENST00000532918 M0R2T5 61 aa6.75□□□□□ -1.33
COLCA1-203ENST00000532918 PRAC1Q96KF2 57 aa6.75□□□□□ -1.33
COLCA1-203ENST00000532918 USP24Q9UPU5 2620 aa6.74□□□□□ -1.33
COLCA1-203ENST00000532918 SRCAPQ6ZRS2 3230 aa6.74□□□□□ -1.33
COLCA1-203ENST00000532918 FLNAP21333 2647 aaKnown RBP6.74□□□□□ -1.33
COLCA1-203ENST00000532918 A0A0G2JQZ4 141 aa6.73□□□□□ -1.33
COLCA1-203ENST00000532918 A0A1W2PNM2 257 aa6.72□□□□□ -1.33
COLCA1-203ENST00000532918 ITPR3Q14573 2671 aa6.71□□□□□ -1.34
COLCA1-203ENST00000532918 Q5VSD8 79 aa6.7□□□□□ -1.34
COLCA1-203ENST00000532918 Q5XG85 94 aa6.7□□□□□ -1.34
COLCA1-203ENST00000532918 GOLGB1Q14789 3259 aaKnown RBP6.7□□□□□ -1.34
COLCA1-203ENST00000532918 A0A1B0GU33 70 aa6.69□□□□□ -1.34
COLCA1-203ENST00000532918 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
COLCA1-203ENST00000532918 CR1P17927 2039 aa6.67□□□□□ -1.34
COLCA1-203ENST00000532918 Q8N1X5 172 aa6.67□□□□□ -1.34
COLCA1-203ENST00000532918 OCR1Q9BZK8 76 aa6.67□□□□□ -1.34
COLCA1-203ENST00000532918 LINC01558Q9Y6Z2 57 aa6.66□□□□□ -1.34
COLCA1-203ENST00000532918 MAST4O15021 2626 aa6.65□□□□□ -1.34
COLCA1-203ENST00000532918 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
COLCA1-203ENST00000532918 ATRQ13535 2644 aa6.63□□□□□ -1.35
COLCA1-203ENST00000532918 KRTAP21-3Q3LHN1 58 aa6.63□□□□□ -1.35
COLCA1-203ENST00000532918 FP248Q71RG6 208 aaPredicted RBP6.62□□□□□ -1.35
COLCA1-203ENST00000532918 SPINK7P58062 85 aa6.62□□□□□ -1.35
COLCA1-203ENST00000532918 OXTP01178 125 aa6.62□□□□□ -1.35
COLCA1-203ENST00000532918 CFAP46Q8IYW2 2715 aa6.61□□□□□ -1.35
COLCA1-203ENST00000532918 ZCCHC13Q8WW36 166 aaKnown RBP6.59□□□□□ -1.35
COLCA1-203ENST00000532918 SPRR1AP35321 89 aa6.58□□□□□ -1.36
COLCA1-203ENST00000532918 Q5VV11 94 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms