RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 TRAV10A0A0B4J240 114 aa9.73□□□□□ -0.85
SSH3-210ENST00000532881 H3BNG1 76 aa9.73□□□□□ -0.85
SSH3-210ENST00000532881 HUWE1Q7Z6Z7 4374 aaKnown RBP9.73□□□□□ -0.85
SSH3-210ENST00000532881 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
SSH3-210ENST00000532881 DNAH1Q9P2D7 4330 aa9.72□□□□□ -0.85
SSH3-210ENST00000532881 LINC01556Q5JQF7 62 aa9.71□□□□□ -0.85
SSH3-210ENST00000532881 Q8N9L7 120 aa9.71□□□□□ -0.85
SSH3-210ENST00000532881 COL7A1Q02388 2944 aa9.7□□□□□ -0.86
SSH3-210ENST00000532881 TRBV7-4A0A0J9YYF1 115 aa9.7□□□□□ -0.86
SSH3-210ENST00000532881 C7orf33Q8WU49 177 aa9.69□□□□□ -0.86
SSH3-210ENST00000532881 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
SSH3-210ENST00000532881 TENM2Q9NT68 2774 aa9.69□□□□□ -0.86
SSH3-210ENST00000532881 C20orf197Q8N268 126 aa9.69□□□□□ -0.86
SSH3-210ENST00000532881 MGAM2Q2M2H8 2515 aa9.68□□□□□ -0.86
SSH3-210ENST00000532881 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
SSH3-210ENST00000532881 ATP5EP2Q5VTU8 51 aa9.68□□□□□ -0.86
SSH3-210ENST00000532881 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
SSH3-210ENST00000532881 DNAH9Q9NYC9 4486 aa9.67□□□□□ -0.86
SSH3-210ENST00000532881 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
SSH3-210ENST00000532881 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
SSH3-210ENST00000532881 ST20-AS1Q8NBB2 130 aa9.65□□□□□ -0.87
SSH3-210ENST00000532881 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
SSH3-210ENST00000532881 Q8N377 158 aa9.64□□□□□ -0.87
SSH3-210ENST00000532881 OXTP01178 125 aa9.63□□□□□ -0.87
SSH3-210ENST00000532881 FAM19A5Q7Z5A7 132 aaPredicted RBP9.63□□□□□ -0.87
SSH3-210ENST00000532881 SNURFQ9Y675 71 aa9.63□□□□□ -0.87
SSH3-210ENST00000532881 STAB2Q8WWQ8 2551 aa9.63□□□□□ -0.87
SSH3-210ENST00000532881 Q9BRP9 147 aa9.62□□□□□ -0.87
SSH3-210ENST00000532881 DNAH7Q8WXX0 4024 aa9.62□□□□□ -0.87
SSH3-210ENST00000532881 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
SSH3-210ENST00000532881 A0A0G2JQZ4 141 aa9.61□□□□□ -0.87
SSH3-210ENST00000532881 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
SSH3-210ENST00000532881 KCNQ1DNQ9H478 68 aa9.61□□□□□ -0.87
SSH3-210ENST00000532881 BPY2O14599 106 aa9.61□□□□□ -0.87
SSH3-210ENST00000532881 TM2D3Q9BRN9 247 aa9.61□□□□□ -0.87
SSH3-210ENST00000532881 DPH3Q96FX2 82 aa9.6□□□□□ -0.87
SSH3-210ENST00000532881 ERC2-IT1O76042 136 aa9.6□□□□□ -0.87
SSH3-210ENST00000532881 PDE6GP18545 87 aa9.6□□□□□ -0.87
SSH3-210ENST00000532881 RMI2Q96E14 147 aa9.58□□□□□ -0.88
SSH3-210ENST00000532881 K7EIL1 84 aa9.57□□□□□ -0.88
SSH3-210ENST00000532881 CXCL6P80162 114 aa9.57□□□□□ -0.88
SSH3-210ENST00000532881 J3KT08 172 aa9.56□□□□□ -0.88
SSH3-210ENST00000532881 IGLV1-50A0A075B6I6 118 aa9.56□□□□□ -0.88
SSH3-210ENST00000532881 TMEM258P61165 79 aa9.56□□□□□ -0.88
SSH3-210ENST00000532881 Q6ZRX8 168 aa9.55□□□□□ -0.88
SSH3-210ENST00000532881 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
SSH3-210ENST00000532881 KRTAP4-16G5E9R7 235 aaPredicted RBP9.55□□□□□ -0.88
SSH3-210ENST00000532881 NREPQ16612 68 aa9.55□□□□□ -0.88
SSH3-210ENST00000532881 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
SSH3-210ENST00000532881 ETDCA0A1B0GVM5 59 aa9.54□□□□□ -0.88
SSH3-210ENST00000532881 H3BQ85 93 aa9.54□□□□□ -0.88
SSH3-210ENST00000532881 TRAV7A0A075B6U4 112 aa9.53□□□□□ -0.88
SSH3-210ENST00000532881 A0A1W2PNM2 257 aa9.52□□□□□ -0.89
SSH3-210ENST00000532881 IGKV4-1P06312 121 aa9.51□□□□□ -0.89
SSH3-210ENST00000532881 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
SSH3-210ENST00000532881 UBE2BP63146 152 aa9.51□□□□□ -0.89
SSH3-210ENST00000532881 MRPL55Q7Z7F7 128 aaKnown RBP9.51□□□□□ -0.89
SSH3-210ENST00000532881 H7BZZ5 65 aa9.51□□□□□ -0.89
SSH3-210ENST00000532881 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.5□□□□□ -0.89
SSH3-210ENST00000532881 IGLV5-48A0A075B6I7 105 aa9.48□□□□□ -0.89
SSH3-210ENST00000532881 PRLHP81277 87 aa9.48□□□□□ -0.89
SSH3-210ENST00000532881 C1orf137Q5JT78 98 aa9.48□□□□□ -0.89
SSH3-210ENST00000532881 A0A096LNI7 61 aa9.47□□□□□ -0.89
SSH3-210ENST00000532881 F8WEM9 126 aa9.47□□□□□ -0.89
SSH3-210ENST00000532881 SPRR1AP35321 89 aa9.47□□□□□ -0.89
SSH3-210ENST00000532881 F8WDY8 70 aa9.47□□□□□ -0.89
SSH3-210ENST00000532881 DEFB116Q30KQ4 102 aa9.46□□□□□ -0.89
SSH3-210ENST00000532881 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.89
SSH3-210ENST00000532881 CHTF8P0CG12 524 aa9.46□□□□□ -0.9
SSH3-210ENST00000532881 PRYO14603 147 aa9.45□□□□□ -0.9
SSH3-210ENST00000532881 PLA2G2DQ9UNK4 145 aa9.45□□□□□ -0.9
SSH3-210ENST00000532881 RPS28P62857 69 aaKnown RBP9.44□□□□□ -0.9
SSH3-210ENST00000532881 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
SSH3-210ENST00000532881 PLECQ15149 4684 aaKnown RBP9.44□□□□□ -0.9
SSH3-210ENST00000532881 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
SSH3-210ENST00000532881 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
SSH3-210ENST00000532881 TNP2Q05952 138 aa9.44□□□□□ -0.9
SSH3-210ENST00000532881 C4orf26Q17RF5 130 aa9.44□□□□□ -0.9
SSH3-210ENST00000532881 REG3GQ6UW15 175 aa9.43□□□□□ -0.9
SSH3-210ENST00000532881 IGLV5-37A0A075B6J1 123 aa9.43□□□□□ -0.9
SSH3-210ENST00000532881 KLKP1Q107X0 134 aa9.43□□□□□ -0.9
SSH3-210ENST00000532881 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.9
SSH3-210ENST00000532881 HIGD2AQ9BW72 106 aa9.42□□□□□ -0.9
SSH3-210ENST00000532881 FAM30AQ9NZY2 134 aa9.42□□□□□ -0.9
SSH3-210ENST00000532881 PSCAO43653 123 aa9.41□□□□□ -0.9
SSH3-210ENST00000532881 SMIM29Q86T20 159 aa9.41□□□□□ -0.9
SSH3-210ENST00000532881 Q8NBF4 154 aa9.39□□□□□ -0.91
SSH3-210ENST00000532881 TMEM254Q8TBM7 123 aa9.39□□□□□ -0.91
SSH3-210ENST00000532881 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
SSH3-210ENST00000532881 BCE1O60756 84 aa9.38□□□□□ -0.91
SSH3-210ENST00000532881 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
SSH3-210ENST00000532881 OCR1Q9BZK8 76 aa9.38□□□□□ -0.91
SSH3-210ENST00000532881 K7EQZ3 153 aa9.38□□□□□ -0.91
SSH3-210ENST00000532881 Q5XG85 94 aa9.38□□□□□ -0.91
SSH3-210ENST00000532881 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
SSH3-210ENST00000532881 DSCR10P59022 87 aa9.37□□□□□ -0.91
SSH3-210ENST00000532881 HRCT1Q6UXD1 115 aa9.36□□□□□ -0.91
SSH3-210ENST00000532881 IGFL1Q6UW32 110 aa9.35□□□□□ -0.91
SSH3-210ENST00000532881 C16orf90A8MZG2 172 aa9.34□□□□□ -0.91
SSH3-210ENST00000532881 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms