RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PRO1933Q9H354 126 aa3.62□□□□□ -1.83
HMGB1P42-201ENST00000532126 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 F8VRH5 84 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 SPINK8P0C7L1 97 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 TLX1NBP0CAT3 122 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 IGLC3P0DOY3 106 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 CXCL5P42830 114 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 C9orf116Q5BN46 136 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 COX7B2Q8TF08 81 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 IFI27L1Q96BM0 104 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
HMGB1P42-201ENST00000532126 FAT1Q14517 4588 aa3.6□□□□□ -1.83
HMGB1P42-201ENST00000532126 A0A1W2PNN7 141 aa3.6□□□□□ -1.83
HMGB1P42-201ENST00000532126 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P42-201ENST00000532126 TMEM170BQ5T4T1 132 aa3.6□□□□□ -1.83
HMGB1P42-201ENST00000532126 HIST3H2BBQ8N257 126 aa3.6□□□□□ -1.83
HMGB1P42-201ENST00000532126 FAM19A2Q8N3H0 131 aa3.6□□□□□ -1.83
HMGB1P42-201ENST00000532126 TRAV12-1A0A0B4J245 112 aa3.59□□□□□ -1.83
HMGB1P42-201ENST00000532126 C11orf86A6NJI1 115 aa3.59□□□□□ -1.83
HMGB1P42-201ENST00000532126 LEPROTL1O95214 131 aa3.59□□□□□ -1.83
HMGB1P42-201ENST00000532126 NDUFC2O95298 119 aa3.59□□□□□ -1.83
HMGB1P42-201ENST00000532126 FAM236DA0A1B0GTK5 79 aa3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 FAM168BA1KXE4 195 aa3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 NUPR1O60356 82 aa3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 FAM236CP0DP71 79 aa3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 C9orf129Q5T035 196 aaKnown RBP3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 PHF5AQ7RTV0 110 aaKnown RBP3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 ANKRD29Q8N6D5 301 aa3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 SS18L2Q9UHA2 77 aa3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 HSPB8Q9UJY1 196 aa3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BKO60814 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BJP06899 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 FABP4P15090 132 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BOP23527 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BBP33778 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BDP58876 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BCP62807 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST2H2BEQ16778 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 SFTA2Q6UW10 78 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BHQ93079 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BNQ99877 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BMQ99879 126 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 MIEN1Q9BRT3 115 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 XAGE1AQ9HD64 81 aa3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 SRRM2Q9UQ35 2752 aaKnown RBP3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 ZNF706Q9Y5V0 76 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P42-201ENST00000532126 TMEM223A0PJW6 202 aa3.56□□□□□ -1.84
HMGB1P42-201ENST00000532126 KRTAP16-1A8MUX0 517 aa3.56□□□□□ -1.84
HMGB1P42-201ENST00000532126 KRTAP29-1A8MX34 341 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P42-201ENST00000532126 UBE2BP63146 152 aa3.56□□□□□ -1.84
HMGB1P42-201ENST00000532126 KRTAP7-1Q8IUC3 87 aa3.56□□□□□ -1.84
HMGB1P42-201ENST00000532126 ERG28Q9UKR5 140 aa3.56□□□□□ -1.84
HMGB1P42-201ENST00000532126 PLNP26678 52 aa3.55□□□□□ -1.84
HMGB1P42-201ENST00000532126 COX17Q14061 63 aa3.55□□□□□ -1.84
HMGB1P42-201ENST00000532126 C1orf137Q5JT78 98 aa3.55□□□□□ -1.84
HMGB1P42-201ENST00000532126 SPINK6Q6UWN8 80 aa3.55□□□□□ -1.84
HMGB1P42-201ENST00000532126 ZNF625Q96I27 306 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P42-201ENST00000532126 HIST1H2BLQ99880 126 aa3.55□□□□□ -1.84
HMGB1P42-201ENST00000532126 PSORS1C2Q9UIG4 136 aa3.55□□□□□ -1.84
HMGB1P42-201ENST00000532126 IGKV2D-30A0A075B6S6 120 aa3.54□□□□□ -1.84
HMGB1P42-201ENST00000532126 BPY2O14599 106 aa3.54□□□□□ -1.84
HMGB1P42-201ENST00000532126 DPM2O94777 84 aa3.54□□□□□ -1.84
HMGB1P42-201ENST00000532126 CFC1BP0CG36 223 aa3.54□□□□□ -1.84
HMGB1P42-201ENST00000532126 CFC1P0CG37 223 aa3.54□□□□□ -1.84
HMGB1P42-201ENST00000532126 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
HMGB1P42-201ENST00000532126 PMCHL2Q9BQD1 86 aa3.54□□□□□ -1.84
HMGB1P42-201ENST00000532126 C22orf24Q9Y442 160 aa3.54□□□□□ -1.84
HMGB1P42-201ENST00000532126 FLG2Q5D862 2391 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 SYS1-DBNDD2H3BUS1 97 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 IGKCP01834 107 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 IGLV7-43P04211 117 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 LINC00158P58513 81 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 PCP2Q8IVA1 136 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 SND1-IT1Q9HBX3 110 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 TP73-AS1Q9UF72 201 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 LAMTOR3Q9UHA4 124 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
HMGB1P42-201ENST00000532126 MYMXA0A1B0GTQ4 84 aa3.52□□□□□ -1.85
HMGB1P42-201ENST00000532126 LEPROTO15243 131 aa3.52□□□□□ -1.85
HMGB1P42-201ENST00000532126 MEIG1Q5JSS6 88 aa3.52□□□□□ -1.85
HMGB1P42-201ENST00000532126 PLEKHB2Q96CS7 222 aa3.52□□□□□ -1.85
HMGB1P42-201ENST00000532126 C8orf17Q9NRJ1 99 aa3.52□□□□□ -1.85
HMGB1P42-201ENST00000532126 NDUFA12Q9UI09 145 aa3.52□□□□□ -1.85
HMGB1P42-201ENST00000532126 J3QQQ9 107 aa3.51□□□□□ -1.85
HMGB1P42-201ENST00000532126 SMIM13P0DJ93 91 aa3.51□□□□□ -1.85
HMGB1P42-201ENST00000532126 LGALS3P17931 250 aaKnown RBP3.51□□□□□ -1.85
HMGB1P42-201ENST00000532126 TSPEAR-AS2P59090 65 aa3.51□□□□□ -1.85
HMGB1P42-201ENST00000532126 KRTDAPP60985 99 aa3.51□□□□□ -1.85
HMGB1P42-201ENST00000532126 DIRC1Q969H9 104 aa3.51□□□□□ -1.85
HMGB1P42-201ENST00000532126 LINC00167Q96N53 147 aa3.51□□□□□ -1.85
HMGB1P42-201ENST00000532126 DMBT1Q9UGM3 2413 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 J3QR89 54 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 BCE1O60756 84 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 C3orf79P0CE67 100 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 LINC00313P59037 77 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms