RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 NDUFC2O95298 119 aa10.1□□□□□ -0.79
SSSCA1-206ENST00000531405 JOSD1Q15040 202 aaPredicted RBP10.1□□□□□ -0.79
SSSCA1-206ENST00000531405 KRTAP19-2Q3LHN2 52 aa10.1□□□□□ -0.79
SSSCA1-206ENST00000531405 SOSTDC1Q6X4U4 206 aa10.1□□□□□ -0.79
SSSCA1-206ENST00000531405 ZNF73O43830 326 aaPredicted RBP10.09□□□□□ -0.79
SSSCA1-206ENST00000531405 PMCHL2Q9BQD1 86 aa10.09□□□□□ -0.79
SSSCA1-206ENST00000531405 LEPROTL1O95214 131 aa10.08□□□□□ -0.8
SSSCA1-206ENST00000531405 PLNP26678 52 aa10.08□□□□□ -0.8
SSSCA1-206ENST00000531405 LGALS3P17931 250 aaKnown RBP10.07□□□□□ -0.8
SSSCA1-206ENST00000531405 NMUP48645 174 aa10.07□□□□□ -0.8
SSSCA1-206ENST00000531405 LINC00310P59036 64 aa10.07□□□□□ -0.8
SSSCA1-206ENST00000531405 DPM2O94777 84 aa10.06□□□□□ -0.8
SSSCA1-206ENST00000531405 HERVK_113P61574 105 aa10.06□□□□□ -0.8
SSSCA1-206ENST00000531405 PCOTHQ58A44 107 aa10.06□□□□□ -0.8
SSSCA1-206ENST00000531405 ADAMTSL4-AS1Q5T5F5 129 aa10.06□□□□□ -0.8
SSSCA1-206ENST00000531405 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
SSSCA1-206ENST00000531405 SERF1AO75920 110 aa10.05□□□□□ -0.8
SSSCA1-206ENST00000531405 MT1HP80294 61 aa10.05□□□□□ -0.8
SSSCA1-206ENST00000531405 C9orf92A6NGG3 77 aa10.04□□□□□ -0.8
SSSCA1-206ENST00000531405 FABP4P15090 132 aa10.04□□□□□ -0.8
SSSCA1-206ENST00000531405 IGKCP01834 107 aa10.03□□□□□ -0.8
SSSCA1-206ENST00000531405 TRGC2P03986 189 aa10.03□□□□□ -0.8
SSSCA1-206ENST00000531405 IGLV8-61A0A075B6I0 122 aa10.02□□□□□ -0.81
SSSCA1-206ENST00000531405 A0A0J9YXY3 114 aa10.02□□□□□ -0.81
SSSCA1-206ENST00000531405 LIMD2Q9BT23 127 aa10.01□□□□□ -0.81
SSSCA1-206ENST00000531405 C5orf52A6NGY3 159 aa10□□□□□ -0.81
SSSCA1-206ENST00000531405 HSPB8Q9UJY1 196 aa10□□□□□ -0.81
SSSCA1-206ENST00000531405 SPRR1BP22528 89 aa9.99□□□□□ -0.81
SSSCA1-206ENST00000531405 HINT1P49773 126 aaPredicted RBP9.99□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BKO60814 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BJP06899 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BOP23527 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BBP33778 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BDP58876 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BCP62807 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST2H2BEQ16778 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 OR13C6PQ8NH95 151 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BHQ93079 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BNQ99877 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 HIST1H2BMQ99879 126 aa9.97□□□□□ -0.81
SSSCA1-206ENST00000531405 E9PLD3 99 aa9.95□□□□□ -0.82
SSSCA1-206ENST00000531405 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
SSSCA1-206ENST00000531405 SPANXCQ9NY87 97 aa9.95□□□□□ -0.82
SSSCA1-206ENST00000531405 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
SSSCA1-206ENST00000531405 LAMTOR3Q9UHA4 124 aa9.95□□□□□ -0.82
SSSCA1-206ENST00000531405 CBY1Q9Y3M2 126 aa9.95□□□□□ -0.82
SSSCA1-206ENST00000531405 COA6Q5JTJ3 125 aaKnown RBP9.94□□□□□ -0.82
SSSCA1-206ENST00000531405 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
SSSCA1-206ENST00000531405 LITAFQ99732 161 aa9.94□□□□□ -0.82
SSSCA1-206ENST00000531405 CFC1BP0CG36 223 aa9.93□□□□□ -0.82
SSSCA1-206ENST00000531405 Q1RN00 199 aa9.93□□□□□ -0.82
SSSCA1-206ENST00000531405 H7C2G1 150 aa9.92□□□□□ -0.82
SSSCA1-206ENST00000531405 DEFB105AQ8NG35 78 aa9.91□□□□□ -0.82
SSSCA1-206ENST00000531405 LORP23490 312 aaPredicted RBP9.9□□□□□ -0.82
SSSCA1-206ENST00000531405 KRTAP10-6P60371 365 aaPredicted RBP9.9□□□□□ -0.82
SSSCA1-206ENST00000531405 FLGP20930 4061 aaPredicted RBP9.9□□□□□ -0.83
SSSCA1-206ENST00000531405 COX7BP24311 80 aa9.89□□□□□ -0.83
SSSCA1-206ENST00000531405 ELOF1P60002 83 aaKnown RBP9.89□□□□□ -0.83
SSSCA1-206ENST00000531405 TAL2Q16559 108 aa9.89□□□□□ -0.83
SSSCA1-206ENST00000531405 SPANXDQ9BXN6 97 aa9.89□□□□□ -0.83
SSSCA1-206ENST00000531405 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
SSSCA1-206ENST00000531405 C6orf99Q4VX62 202 aa9.88□□□□□ -0.83
SSSCA1-206ENST00000531405 CD164Q04900 197 aa9.87□□□□□ -0.83
SSSCA1-206ENST00000531405 PRO1933Q9H354 126 aa9.87□□□□□ -0.83
SSSCA1-206ENST00000531405 A0A0G2JQZ4 141 aa9.86□□□□□ -0.83
SSSCA1-206ENST00000531405 TIMM17BO60830 172 aa9.86□□□□□ -0.83
SSSCA1-206ENST00000531405 S100A6P06703 90 aa9.85□□□□□ -0.83
SSSCA1-206ENST00000531405 TTTY13Q9BZ97 58 aa9.85□□□□□ -0.83
SSSCA1-206ENST00000531405 TEX49A0A1B0GTD5 131 aa9.84□□□□□ -0.83
SSSCA1-206ENST00000531405 ZNF815PA8K554 130 aa9.84□□□□□ -0.83
SSSCA1-206ENST00000531405 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
SSSCA1-206ENST00000531405 C1orf195Q5TG92 126 aa9.84□□□□□ -0.83
SSSCA1-206ENST00000531405 SMIM29Q86T20 159 aa9.84□□□□□ -0.83
SSSCA1-206ENST00000531405 M0R2T5 61 aa9.83□□□□□ -0.84
SSSCA1-206ENST00000531405 SNRPEP62304 92 aaKnown RBP9.82□□□□□ -0.84
SSSCA1-206ENST00000531405 AKR1D1P51857 326 aa9.81□□□□□ -0.84
SSSCA1-206ENST00000531405 RPL37P61927 97 aaKnown RBP9.81□□□□□ -0.84
SSSCA1-206ENST00000531405 Q5XG85 94 aa9.81□□□□□ -0.84
SSSCA1-206ENST00000531405 LINC00518Q8N0U6 118 aa9.81□□□□□ -0.84
SSSCA1-206ENST00000531405 HIST3H2BBQ8N257 126 aa9.81□□□□□ -0.84
SSSCA1-206ENST00000531405 LINC01545Q5VT33 79 aa9.79□□□□□ -0.84
SSSCA1-206ENST00000531405 COX6B2Q6YFQ2 88 aa9.79□□□□□ -0.84
SSSCA1-206ENST00000531405 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
SSSCA1-206ENST00000531405 TRBV7-6A0A0J9YX20 115 aa9.77□□□□□ -0.85
SSSCA1-206ENST00000531405 A0A1B0GWB2 263 aa9.75□□□□□ -0.85
SSSCA1-206ENST00000531405 HIST1H2BLQ99880 126 aa9.75□□□□□ -0.85
SSSCA1-206ENST00000531405 LOC105371267A0A1B0GV96 52 aa9.74□□□□□ -0.85
SSSCA1-206ENST00000531405 S100A2P29034 98 aa9.74□□□□□ -0.85
SSSCA1-206ENST00000531405 PET117Q6UWS5 81 aa9.74□□□□□ -0.85
SSSCA1-206ENST00000531405 A6NDN8 102 aa9.73□□□□□ -0.85
SSSCA1-206ENST00000531405 SCGB1D4Q6XE38 83 aa9.71□□□□□ -0.86
SSSCA1-206ENST00000531405 C3orf79P0CE67 100 aa9.69□□□□□ -0.86
SSSCA1-206ENST00000531405 TCL1BO95988 128 aa9.68□□□□□ -0.86
SSSCA1-206ENST00000531405 MUSTN1Q8IVN3 82 aa9.67□□□□□ -0.86
SSSCA1-206ENST00000531405 IFITM1P13164 125 aa9.66□□□□□ -0.86
SSSCA1-206ENST00000531405 ANKRD39Q53RE8 183 aa9.66□□□□□ -0.86
SSSCA1-206ENST00000531405 A4D1N5 150 aa9.65□□□□□ -0.86
SSSCA1-206ENST00000531405 KRTDAPP60985 99 aa9.65□□□□□ -0.86
SSSCA1-206ENST00000531405 SMIM11BQ8TCY0 68 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms