RNA–Protein interactions for RNA: ENST00000529542.1

HIF3A-213, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-213ENST00000529542 SOSTDC1Q6X4U4 206 aa8.02□□□□□ -1.13
HIF3A-213ENST00000529542 B5MCH6 92 aa8.01□□□□□ -1.13
HIF3A-213ENST00000529542 Q8N377 158 aa8.01□□□□□ -1.13
HIF3A-213ENST00000529542 MOBPQ13875 183 aa8□□□□□ -1.13
HIF3A-213ENST00000529542 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
HIF3A-213ENST00000529542 IGLV9-49A0A0B4J1Y8 123 aa7.99□□□□□ -1.13
HIF3A-213ENST00000529542 SYS1-DBNDD2H3BUS1 97 aa7.99□□□□□ -1.13
HIF3A-213ENST00000529542 DDTP30046 118 aa7.99□□□□□ -1.13
HIF3A-213ENST00000529542 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
HIF3A-213ENST00000529542 E9PLD3 99 aa7.98□□□□□ -1.13
HIF3A-213ENST00000529542 JOSD1Q15040 202 aaPredicted RBP7.98□□□□□ -1.13
HIF3A-213ENST00000529542 Q6ZRX8 168 aa7.98□□□□□ -1.13
HIF3A-213ENST00000529542 LITAFQ99732 161 aa7.98□□□□□ -1.13
HIF3A-213ENST00000529542 A0A0J9YXY3 114 aa7.97□□□□□ -1.13
HIF3A-213ENST00000529542 ERC2-IT1O76042 136 aa7.97□□□□□ -1.13
HIF3A-213ENST00000529542 NMUP48645 174 aa7.97□□□□□ -1.13
HIF3A-213ENST00000529542 XP32Q5T750 250 aa7.97□□□□□ -1.13
HIF3A-213ENST00000529542 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
HIF3A-213ENST00000529542 SPANXB1Q9NS25 103 aaPredicted RBP7.97□□□□□ -1.13
HIF3A-213ENST00000529542 C5orf52A6NGY3 159 aa7.96□□□□□ -1.14
HIF3A-213ENST00000529542 MIEN1Q9BRT3 115 aa7.96□□□□□ -1.14
HIF3A-213ENST00000529542 KRTAP4-1Q9BYQ7 146 aa7.96□□□□□ -1.14
HIF3A-213ENST00000529542 NDUFC2O95298 119 aa7.95□□□□□ -1.14
HIF3A-213ENST00000529542 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
HIF3A-213ENST00000529542 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
HIF3A-213ENST00000529542 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
HIF3A-213ENST00000529542 Q9BRP9 147 aa7.95□□□□□ -1.14
HIF3A-213ENST00000529542 CBY1Q9Y3M2 126 aa7.95□□□□□ -1.14
HIF3A-213ENST00000529542 HERVK_113P61574 105 aa7.94□□□□□ -1.14
HIF3A-213ENST00000529542 S100A7L2Q5SY68 101 aa7.94□□□□□ -1.14
HIF3A-213ENST00000529542 TTTY13Q9BZ97 58 aa7.94□□□□□ -1.14
HIF3A-213ENST00000529542 C3orf79P0CE67 100 aa7.93□□□□□ -1.14
HIF3A-213ENST00000529542 NPC2P61916 151 aa7.93□□□□□ -1.14
HIF3A-213ENST00000529542 HINT1P49773 126 aaPredicted RBP7.91□□□□□ -1.14
HIF3A-213ENST00000529542 C9orf153Q5TBE3 101 aa7.91□□□□□ -1.14
HIF3A-213ENST00000529542 PET117Q6UWS5 81 aa7.91□□□□□ -1.14
HIF3A-213ENST00000529542 TRAV23DV6A0A075B6W5 121 aa7.9□□□□□ -1.14
HIF3A-213ENST00000529542 SLC25A34Q6PIV7 304 aa7.9□□□□□ -1.14
HIF3A-213ENST00000529542 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
HIF3A-213ENST00000529542 LIMD2Q9BT23 127 aa7.89□□□□□ -1.15
HIF3A-213ENST00000529542 LINC00308Q8TCZ7 52 aa7.88□□□□□ -1.15
HIF3A-213ENST00000529542 TIMM17BO60830 172 aa7.86□□□□□ -1.15
HIF3A-213ENST00000529542 ANKRD39Q53RE8 183 aa7.86□□□□□ -1.15
HIF3A-213ENST00000529542 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
HIF3A-213ENST00000529542 SPRR1BP22528 89 aa7.85□□□□□ -1.15
HIF3A-213ENST00000529542 ZNF815PA8K554 130 aa7.84□□□□□ -1.15
HIF3A-213ENST00000529542 CFC1BP0CG36 223 aa7.84□□□□□ -1.15
HIF3A-213ENST00000529542 KRTDAPP60985 99 aa7.84□□□□□ -1.15
HIF3A-213ENST00000529542 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
HIF3A-213ENST00000529542 ST20-AS1Q8NBB2 130 aa7.84□□□□□ -1.15
HIF3A-213ENST00000529542 DHRS4-AS1Q9P1J3 65 aa7.84□□□□□ -1.15
HIF3A-213ENST00000529542 SPANXCQ9NY87 97 aa7.83□□□□□ -1.16
HIF3A-213ENST00000529542 ATOH7Q8N100 152 aa7.82□□□□□ -1.16
HIF3A-213ENST00000529542 LAMTOR3Q9UHA4 124 aa7.82□□□□□ -1.16
HIF3A-213ENST00000529542 CD164Q04900 197 aa7.8□□□□□ -1.16
HIF3A-213ENST00000529542 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
HIF3A-213ENST00000529542 PCP2Q8IVA1 136 aa7.8□□□□□ -1.16
HIF3A-213ENST00000529542 IGLV8-61A0A075B6I0 122 aa7.79□□□□□ -1.16
HIF3A-213ENST00000529542 KRTAP19-2Q3LHN2 52 aa7.79□□□□□ -1.16
HIF3A-213ENST00000529542 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
HIF3A-213ENST00000529542 OR13C6PQ8NH95 151 aa7.78□□□□□ -1.16
HIF3A-213ENST00000529542 MT1HP80294 61 aa7.77□□□□□ -1.17
HIF3A-213ENST00000529542 HIST3H2BBQ8N257 126 aa7.77□□□□□ -1.17
HIF3A-213ENST00000529542 Q5XG85 94 aa7.76□□□□□ -1.17
HIF3A-213ENST00000529542 HRCT1Q6UXD1 115 aa7.76□□□□□ -1.17
HIF3A-213ENST00000529542 LINC00518Q8N0U6 118 aa7.76□□□□□ -1.17
HIF3A-213ENST00000529542 PRO1933Q9H354 126 aa7.76□□□□□ -1.17
HIF3A-213ENST00000529542 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
HIF3A-213ENST00000529542 ELOF1P60002 83 aaKnown RBP7.75□□□□□ -1.17
HIF3A-213ENST00000529542 TAL2Q16559 108 aa7.75□□□□□ -1.17
HIF3A-213ENST00000529542 HIST1H2BLQ99880 126 aa7.75□□□□□ -1.17
HIF3A-213ENST00000529542 COX7BP24311 80 aa7.74□□□□□ -1.17
HIF3A-213ENST00000529542 C6orf99Q4VX62 202 aa7.74□□□□□ -1.17
HIF3A-213ENST00000529542 FSIP2Q5CZC0 6907 aa7.73□□□□□ -1.17
HIF3A-213ENST00000529542 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
HIF3A-213ENST00000529542 H7C2G1 150 aa7.73□□□□□ -1.17
HIF3A-213ENST00000529542 MUSTN1Q8IVN3 82 aa7.73□□□□□ -1.17
HIF3A-213ENST00000529542 TRBV7-6A0A0J9YX20 115 aa7.72□□□□□ -1.17
HIF3A-213ENST00000529542 C20orf202A1L168 122 aa7.72□□□□□ -1.17
HIF3A-213ENST00000529542 AKR1D1P51857 326 aa7.72□□□□□ -1.17
HIF3A-213ENST00000529542 SCGB1D4Q6XE38 83 aa7.71□□□□□ -1.18
HIF3A-213ENST00000529542 IFITM1P13164 125 aa7.7□□□□□ -1.18
HIF3A-213ENST00000529542 SMIM29Q86T20 159 aa7.7□□□□□ -1.18
HIF3A-213ENST00000529542 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
HIF3A-213ENST00000529542 Q1RN00 199 aa7.69□□□□□ -1.18
HIF3A-213ENST00000529542 DEFB105AQ8NG35 78 aa7.69□□□□□ -1.18
HIF3A-213ENST00000529542 Q6ZVH6 145 aa7.68□□□□□ -1.18
HIF3A-213ENST00000529542 COPS9Q8WXC6 57 aa7.68□□□□□ -1.18
HIF3A-213ENST00000529542 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
HIF3A-213ENST00000529542 KRTAP10-6P60371 365 aaPredicted RBP7.67□□□□□ -1.18
HIF3A-213ENST00000529542 C1orf195Q5TG92 126 aa7.67□□□□□ -1.18
HIF3A-213ENST00000529542 RPL37P61927 97 aaKnown RBP7.66□□□□□ -1.18
HIF3A-213ENST00000529542 IGLV5-48A0A075B6I7 105 aa7.65□□□□□ -1.18
HIF3A-213ENST00000529542 A4D1N5 150 aa7.65□□□□□ -1.18
HIF3A-213ENST00000529542 M0R2T5 61 aa7.65□□□□□ -1.18
HIF3A-213ENST00000529542 SMIM11BQ8TCY0 68 aa7.65□□□□□ -1.18
HIF3A-213ENST00000529542 A0A0G2JQZ4 141 aa7.64□□□□□ -1.19
HIF3A-213ENST00000529542 TCL1BO95988 128 aa7.64□□□□□ -1.19
HIF3A-213ENST00000529542 SNRPEP62304 92 aaKnown RBP7.64□□□□□ -1.19
HIF3A-213ENST00000529542 COX6B2Q6YFQ2 88 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms