RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 DYNC2H1Q8NCM8 4307 aaKnown RBP11.17□□□□□ -0.62
CAPRIN1-207ENST00000529307 LINC00158P58513 81 aa11.16□□□□□ -0.62
CAPRIN1-207ENST00000529307 LINC01547P58512 204 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-207ENST00000529307 PMAIP1Q13794 54 aa11.16□□□□□ -0.62
CAPRIN1-207ENST00000529307 TRBV7-4A0A0J9YYF1 115 aa11.15□□□□□ -0.62
CAPRIN1-207ENST00000529307 LINC00588Q9Y4M8 146 aa11.15□□□□□ -0.62
CAPRIN1-207ENST00000529307 DNAH1Q9P2D7 4330 aa11.15□□□□□ -0.62
CAPRIN1-207ENST00000529307 LINC01556Q5JQF7 62 aa11.15□□□□□ -0.62
CAPRIN1-207ENST00000529307 MPLKIPQ8TAP9 179 aa11.15□□□□□ -0.62
CAPRIN1-207ENST00000529307 LYSTQ99698 3801 aa11.15□□□□□ -0.63
CAPRIN1-207ENST00000529307 Q8N814 137 aa11.14□□□□□ -0.63
CAPRIN1-207ENST00000529307 MEGF8Q7Z7M0 2845 aa11.14□□□□□ -0.63
CAPRIN1-207ENST00000529307 FAM229BQ4G0N7 80 aa11.14□□□□□ -0.63
CAPRIN1-207ENST00000529307 KRTAP26-1Q6PEX3 210 aa11.14□□□□□ -0.63
CAPRIN1-207ENST00000529307 PRR15Q8IV56 129 aa11.14□□□□□ -0.63
CAPRIN1-207ENST00000529307 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
CAPRIN1-207ENST00000529307 CSMD3Q7Z407 3707 aa11.12□□□□□ -0.63
CAPRIN1-207ENST00000529307 CXCL6P80162 114 aa11.12□□□□□ -0.63
CAPRIN1-207ENST00000529307 DNAH10OSP0CZ25 163 aa11.11□□□□□ -0.63
CAPRIN1-207ENST00000529307 Q6ZQT0 140 aa11.11□□□□□ -0.63
CAPRIN1-207ENST00000529307 ERC2-IT1O76042 136 aa11.1□□□□□ -0.63
CAPRIN1-207ENST00000529307 C6orf223Q8N319 242 aa11.1□□□□□ -0.63
CAPRIN1-207ENST00000529307 LOC110117498A0A087WWA1 95 aa11.1□□□□□ -0.63
CAPRIN1-207ENST00000529307 HAMPP81172 84 aa11.1□□□□□ -0.63
CAPRIN1-207ENST00000529307 Q6ZRU5 148 aa11.1□□□□□ -0.63
CAPRIN1-207ENST00000529307 Q6ZVQ6 151 aa11.09□□□□□ -0.63
CAPRIN1-207ENST00000529307 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-207ENST00000529307 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
CAPRIN1-207ENST00000529307 DNAH7Q8WXX0 4024 aa11.08□□□□□ -0.64
CAPRIN1-207ENST00000529307 C10orf25Q5T742 122 aa11.07□□□□□ -0.64
CAPRIN1-207ENST00000529307 TMEM254Q8TBM7 123 aa11.07□□□□□ -0.64
CAPRIN1-207ENST00000529307 C9orf116Q5BN46 136 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-207ENST00000529307 UNQ6190/PRO20217Q6UXQ8 127 aa11.06□□□□□ -0.64
CAPRIN1-207ENST00000529307 NREPQ16612 68 aa11.05□□□□□ -0.64
CAPRIN1-207ENST00000529307 IGKV2D-24A0A075B6R9 120 aa11.03□□□□□ -0.64
CAPRIN1-207ENST00000529307 C15orf56Q8N910 161 aa11.02□□□□□ -0.64
CAPRIN1-207ENST00000529307 APLNQ9ULZ1 77 aa11.02□□□□□ -0.64
CAPRIN1-207ENST00000529307 ZNF561-AS1K7EIQ3 104 aa11.02□□□□□ -0.65
CAPRIN1-207ENST00000529307 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.65
CAPRIN1-207ENST00000529307 STARD9Q9P2P6 4700 aa11.02□□□□□ -0.65
CAPRIN1-207ENST00000529307 FUSP35637 526 aaKnown RBP eCLIP11.01□□□□□ -0.65
CAPRIN1-207ENST00000529307 PDE6GP18545 87 aa11.01□□□□□ -0.65
CAPRIN1-207ENST00000529307 TENM2Q9NT68 2774 aa11□□□□□ -0.65
CAPRIN1-207ENST00000529307 PRYO14603 147 aa11□□□□□ -0.65
CAPRIN1-207ENST00000529307 CD164Q04900 197 aa11□□□□□ -0.65
CAPRIN1-207ENST00000529307 COX17Q14061 63 aa11□□□□□ -0.65
CAPRIN1-207ENST00000529307 M0R2N4 97 aa10.99□□□□□ -0.65
CAPRIN1-207ENST00000529307 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
CAPRIN1-207ENST00000529307 DNAH10Q8IVF4 4471 aa10.98□□□□□ -0.65
CAPRIN1-207ENST00000529307 BPY2O14599 106 aa10.98□□□□□ -0.65
CAPRIN1-207ENST00000529307 KRTAP21-3Q3LHN1 58 aa10.97□□□□□ -0.65
CAPRIN1-207ENST00000529307 CASC10Q5T4H9 136 aa10.97□□□□□ -0.65
CAPRIN1-207ENST00000529307 GVQW2A0A096LPI5 108 aaPredicted RBP10.96□□□□□ -0.65
CAPRIN1-207ENST00000529307 Q8NDZ9 215 aa10.96□□□□□ -0.66
CAPRIN1-207ENST00000529307 KRTAP1-5Q9BYS1 174 aa10.96□□□□□ -0.66
CAPRIN1-207ENST00000529307 Q1T7F1 81 aa10.95□□□□□ -0.66
CAPRIN1-207ENST00000529307 LINC00575Q6W349 94 aa10.95□□□□□ -0.66
CAPRIN1-207ENST00000529307 PRR3P79522 188 aaKnown RBP10.94□□□□□ -0.66
CAPRIN1-207ENST00000529307 CAMK2N2Q96S95 79 aa10.94□□□□□ -0.66
CAPRIN1-207ENST00000529307 FBN3Q75N90 2809 aa10.92□□□□□ -0.66
CAPRIN1-207ENST00000529307 H3BQ85 93 aa10.92□□□□□ -0.66
CAPRIN1-207ENST00000529307 hDV103S1A0JD37 113 aa10.91□□□□□ -0.66
CAPRIN1-207ENST00000529307 VPS13DQ5THJ4 4388 aa10.91□□□□□ -0.66
CAPRIN1-207ENST00000529307 NUPR2A6NF83 97 aa10.91□□□□□ -0.66
CAPRIN1-207ENST00000529307 C6orf99Q4VX62 202 aa10.91□□□□□ -0.66
CAPRIN1-207ENST00000529307 UBE2DNLQ8IWF7 75 aa10.91□□□□□ -0.66
CAPRIN1-207ENST00000529307 SCXQ7RTU7 201 aa10.9□□□□□ -0.66
CAPRIN1-207ENST00000529307 OCR1Q9BZK8 76 aa10.9□□□□□ -0.66
CAPRIN1-207ENST00000529307 MUC7Q8TAX7 377 aa10.89□□□□□ -0.67
CAPRIN1-207ENST00000529307 Q6ZRP5 223 aa10.88□□□□□ -0.67
CAPRIN1-207ENST00000529307 XAGE1AQ9HD64 81 aa10.88□□□□□ -0.67
CAPRIN1-207ENST00000529307 SYCNQ0VAF6 134 aa10.86□□□□□ -0.67
CAPRIN1-207ENST00000529307 HIGD2AQ9BW72 106 aa10.84□□□□□ -0.67
CAPRIN1-207ENST00000529307 IGKV4-1P06312 121 aa10.81□□□□□ -0.68
CAPRIN1-207ENST00000529307 MRPL55Q7Z7F7 128 aaKnown RBP10.81□□□□□ -0.68
CAPRIN1-207ENST00000529307 Q6ZQY7 126 aa10.8□□□□□ -0.68
CAPRIN1-207ENST00000529307 C1orf64Q8NEQ6 169 aa10.79□□□□□ -0.68
CAPRIN1-207ENST00000529307 TGP01266 2768 aa10.78□□□□□ -0.68
CAPRIN1-207ENST00000529307 KMT2AQ03164 3969 aa10.78□□□□□ -0.68
CAPRIN1-207ENST00000529307 TRAV22A0A0B4J277 110 aa10.78□□□□□ -0.68
CAPRIN1-207ENST00000529307 NBDYA0A0U1RRE5 68 aa10.78□□□□□ -0.68
CAPRIN1-207ENST00000529307 LRCOL1A6NCL2 159 aa10.77□□□□□ -0.69
CAPRIN1-207ENST00000529307 PSPHP1O15172 72 aa10.77□□□□□ -0.69
CAPRIN1-207ENST00000529307 VPREB1P12018 145 aa10.77□□□□□ -0.69
CAPRIN1-207ENST00000529307 IGLV6-57P01721 117 aa10.76□□□□□ -0.69
CAPRIN1-207ENST00000529307 TLX1NBP0CAT3 122 aa10.75□□□□□ -0.69
CAPRIN1-207ENST00000529307 Q8N9L7 120 aa10.75□□□□□ -0.69
CAPRIN1-207ENST00000529307 LCE6AA0A183 80 aa10.74□□□□□ -0.69
CAPRIN1-207ENST00000529307 PSCAO43653 123 aa10.74□□□□□ -0.69
CAPRIN1-207ENST00000529307 COX7BP24311 80 aa10.74□□□□□ -0.69
CAPRIN1-207ENST00000529307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.73□□□□□ -0.69
CAPRIN1-207ENST00000529307 DNAH2Q9P225 4427 aa10.73□□□□□ -0.69
CAPRIN1-207ENST00000529307 KTN1-AS1Q86SY8 53 aa10.72□□□□□ -0.69
CAPRIN1-207ENST00000529307 Q6ZRN7 208 aaPredicted RBP10.72□□□□□ -0.69
CAPRIN1-207ENST00000529307 UBE2BP63146 152 aa10.71□□□□□ -0.69
CAPRIN1-207ENST00000529307 SERTAD4-AS1Q5TG53 156 aa10.71□□□□□ -0.69
CAPRIN1-207ENST00000529307 CYP4F30PQ9H0H9 118 aa10.7□□□□□ -0.7
CAPRIN1-207ENST00000529307 RBM12B-AS1Q9P1G2 102 aa10.7□□□□□ -0.7
CAPRIN1-207ENST00000529307 FAM168BA1KXE4 195 aa10.68□□□□□ -0.7
CAPRIN1-207ENST00000529307 M0R378 163 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms