RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 CHTOPQ9Y3Y2 248 aaKnown RBP7.42□□□□□ -1.22
HIF3A-212ENST00000529205 TRBV10-3A0A0K0K1G6 114 aa7.41□□□□□ -1.22
HIF3A-212ENST00000529205 B5MCH6 92 aa7.41□□□□□ -1.22
HIF3A-212ENST00000529205 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
HIF3A-212ENST00000529205 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
HIF3A-212ENST00000529205 HSPB8Q9UJY1 196 aa7.41□□□□□ -1.22
HIF3A-212ENST00000529205 M0R2T5 61 aa7.4□□□□□ -1.22
HIF3A-212ENST00000529205 PCOTHQ58A44 107 aa7.4□□□□□ -1.22
HIF3A-212ENST00000529205 MIR7-3HGQ8N6C7 128 aa7.4□□□□□ -1.22
HIF3A-212ENST00000529205 HERV-K104P63124 156 aa7.39□□□□□ -1.23
HIF3A-212ENST00000529205 KRTAP19-2Q3LHN2 52 aa7.39□□□□□ -1.23
HIF3A-212ENST00000529205 MAP1LC3CQ9BXW4 147 aa7.39□□□□□ -1.23
HIF3A-212ENST00000529205 TMA7Q9Y2S6 64 aaKnown RBP7.39□□□□□ -1.23
HIF3A-212ENST00000529205 TMEM223A0PJW6 202 aa7.38□□□□□ -1.23
HIF3A-212ENST00000529205 ERC2-IT1O76042 136 aa7.38□□□□□ -1.23
HIF3A-212ENST00000529205 JOSD1Q15040 202 aaPredicted RBP7.38□□□□□ -1.23
HIF3A-212ENST00000529205 LINC01545Q5VT33 79 aa7.38□□□□□ -1.23
HIF3A-212ENST00000529205 LIMD2Q9BT23 127 aa7.38□□□□□ -1.23
HIF3A-212ENST00000529205 LORP23490 312 aaPredicted RBP7.37□□□□□ -1.23
HIF3A-212ENST00000529205 DDTP30046 118 aa7.37□□□□□ -1.23
HIF3A-212ENST00000529205 TSPEAR-AS2P59090 65 aa7.37□□□□□ -1.23
HIF3A-212ENST00000529205 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
HIF3A-212ENST00000529205 KRTDAPP60985 99 aa7.37□□□□□ -1.23
HIF3A-212ENST00000529205 S100A6P06703 90 aa7.36□□□□□ -1.23
HIF3A-212ENST00000529205 Q6ZRX8 168 aa7.36□□□□□ -1.23
HIF3A-212ENST00000529205 PET117Q6UWS5 81 aa7.35□□□□□ -1.23
HIF3A-212ENST00000529205 Q9BRP9 147 aa7.35□□□□□ -1.23
HIF3A-212ENST00000529205 TRBV10-2A0A0K0K1G8 114 aa7.34□□□□□ -1.23
HIF3A-212ENST00000529205 C9orf92A6NGG3 77 aa7.34□□□□□ -1.23
HIF3A-212ENST00000529205 DPM2O94777 84 aa7.34□□□□□ -1.23
HIF3A-212ENST00000529205 MYMXA0A1B0GTQ4 84 aa7.33□□□□□ -1.24
HIF3A-212ENST00000529205 IGKCP01834 107 aa7.33□□□□□ -1.24
HIF3A-212ENST00000529205 S100A7L2Q5SY68 101 aa7.33□□□□□ -1.24
HIF3A-212ENST00000529205 COX6B2Q6YFQ2 88 aa7.33□□□□□ -1.24
HIF3A-212ENST00000529205 ATOH7Q8N100 152 aa7.33□□□□□ -1.24
HIF3A-212ENST00000529205 MIEN1Q9BRT3 115 aa7.32□□□□□ -1.24
HIF3A-212ENST00000529205 PLNP26678 52 aa7.31□□□□□ -1.24
HIF3A-212ENST00000529205 S100A2P29034 98 aa7.31□□□□□ -1.24
HIF3A-212ENST00000529205 HINT1P49773 126 aaPredicted RBP7.31□□□□□ -1.24
HIF3A-212ENST00000529205 ANKRD39Q53RE8 183 aa7.31□□□□□ -1.24
HIF3A-212ENST00000529205 SLC25A34Q6PIV7 304 aa7.31□□□□□ -1.24
HIF3A-212ENST00000529205 IGLV6-57P01721 117 aa7.3□□□□□ -1.24
HIF3A-212ENST00000529205 HRCT1Q6UXD1 115 aa7.3□□□□□ -1.24
HIF3A-212ENST00000529205 TTTY13Q9BZ97 58 aa7.3□□□□□ -1.24
HIF3A-212ENST00000529205 SPANXB1Q9NS25 103 aaPredicted RBP7.3□□□□□ -1.24
HIF3A-212ENST00000529205 LOC107984156A0A0G2JMH3 177 aa7.29□□□□□ -1.24
HIF3A-212ENST00000529205 ARL17AQ8IVW1 177 aa7.29□□□□□ -1.24
HIF3A-212ENST00000529205 TRAV23DV6A0A075B6W5 121 aa7.28□□□□□ -1.24
HIF3A-212ENST00000529205 LEPROTO15243 131 aa7.28□□□□□ -1.24
HIF3A-212ENST00000529205 CBY1Q9Y3M2 126 aa7.28□□□□□ -1.24
HIF3A-212ENST00000529205 E9PLD3 99 aa7.27□□□□□ -1.25
HIF3A-212ENST00000529205 ZNF73O43830 326 aaPredicted RBP7.26□□□□□ -1.25
HIF3A-212ENST00000529205 NDUFC2O95298 119 aa7.26□□□□□ -1.25
HIF3A-212ENST00000529205 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
HIF3A-212ENST00000529205 LAMTOR3Q9UHA4 124 aa7.26□□□□□ -1.25
HIF3A-212ENST00000529205 J3QQQ9 107 aa7.25□□□□□ -1.25
HIF3A-212ENST00000529205 PYY3Q5JQD4 70 aa7.24□□□□□ -1.25
HIF3A-212ENST00000529205 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
HIF3A-212ENST00000529205 PCP2Q8IVA1 136 aa7.23□□□□□ -1.25
HIF3A-212ENST00000529205 C20orf202A1L168 122 aa7.22□□□□□ -1.25
HIF3A-212ENST00000529205 EIF4EBP3O60516 100 aaPredicted RBP7.22□□□□□ -1.25
HIF3A-212ENST00000529205 SCGB1D1O95968 90 aa7.22□□□□□ -1.25
HIF3A-212ENST00000529205 SPRR1BP22528 89 aa7.22□□□□□ -1.25
HIF3A-212ENST00000529205 CD164Q04900 197 aa7.22□□□□□ -1.25
HIF3A-212ENST00000529205 LITAFQ99732 161 aa7.22□□□□□ -1.25
HIF3A-212ENST00000529205 LOC105371267A0A1B0GV96 52 aa7.21□□□□□ -1.26
HIF3A-212ENST00000529205 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.26
HIF3A-212ENST00000529205 ADAMTSL4-AS1Q5T5F5 129 aa7.21□□□□□ -1.26
HIF3A-212ENST00000529205 DHRS4-AS1Q9P1J3 65 aa7.21□□□□□ -1.26
HIF3A-212ENST00000529205 A0A0J9YXY3 114 aa7.2□□□□□ -1.26
HIF3A-212ENST00000529205 NMUP48645 174 aa7.2□□□□□ -1.26
HIF3A-212ENST00000529205 HERVK_113P61574 105 aa7.2□□□□□ -1.26
HIF3A-212ENST00000529205 PRO1933Q9H354 126 aa7.2□□□□□ -1.26
HIF3A-212ENST00000529205 H7C2G1 150 aa7.19□□□□□ -1.26
HIF3A-212ENST00000529205 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
HIF3A-212ENST00000529205 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.18□□□□□ -1.26
HIF3A-212ENST00000529205 TAL2Q16559 108 aa7.18□□□□□ -1.26
HIF3A-212ENST00000529205 SOSTDC1Q6X4U4 206 aa7.18□□□□□ -1.26
HIF3A-212ENST00000529205 ZNF815PA8K554 130 aa7.16□□□□□ -1.26
HIF3A-212ENST00000529205 NPC2P61916 151 aa7.16□□□□□ -1.26
HIF3A-212ENST00000529205 Q5XG85 94 aa7.16□□□□□ -1.26
HIF3A-212ENST00000529205 OR13C6PQ8NH95 151 aa7.16□□□□□ -1.26
HIF3A-212ENST00000529205 AKR1D1P51857 326 aa7.15□□□□□ -1.26
HIF3A-212ENST00000529205 Q1RN00 199 aa7.15□□□□□ -1.26
HIF3A-212ENST00000529205 C1orf195Q5TG92 126 aa7.14□□□□□ -1.27
HIF3A-212ENST00000529205 Q6Q795 121 aa7.14□□□□□ -1.27
HIF3A-212ENST00000529205 DEFB105AQ8NG35 78 aa7.14□□□□□ -1.27
HIF3A-212ENST00000529205 PAM16Q9Y3D7 125 aa7.14□□□□□ -1.27
HIF3A-212ENST00000529205 SPATA45Q537H7 98 aa7.13□□□□□ -1.27
HIF3A-212ENST00000529205 TEX49A0A1B0GTD5 131 aa7.12□□□□□ -1.27
HIF3A-212ENST00000529205 CFC1P0CG37 223 aa7.12□□□□□ -1.27
HIF3A-212ENST00000529205 COX8AP10176 69 aa7.12□□□□□ -1.27
HIF3A-212ENST00000529205 C14orf144Q96I85 54 aa7.12□□□□□ -1.27
HIF3A-212ENST00000529205 TIMM17BO60830 172 aa7.11□□□□□ -1.27
HIF3A-212ENST00000529205 COX7BP24311 80 aa7.11□□□□□ -1.27
HIF3A-212ENST00000529205 SPANXCQ9NY87 97 aa7.11□□□□□ -1.27
HIF3A-212ENST00000529205 TCL1BO95988 128 aa7.1□□□□□ -1.27
HIF3A-212ENST00000529205 C2orf91Q6ZV80 131 aa7.1□□□□□ -1.27
HIF3A-212ENST00000529205 SMIM29Q86T20 159 aa7.1□□□□□ -1.27
HIF3A-212ENST00000529205 VAMP8Q9BV40 100 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms