RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 SEC61BP60468 96 aaKnown RBP14.42□□□□□ -0.1
TRIM3-206ENST00000528227 JOSD1Q15040 202 aaPredicted RBP14.41□□□□□ -0.1
TRIM3-206ENST00000528227 SOSTDC1Q6X4U4 206 aa14.41□□□□□ -0.1
TRIM3-206ENST00000528227 EIF4EBP3O60516 100 aaPredicted RBP14.39□□□□□ -0.11
TRIM3-206ENST00000528227 ZNF73O43830 326 aaPredicted RBP14.38□□□□□ -0.11
TRIM3-206ENST00000528227 NPC2P61916 151 aa14.38□□□□□ -0.11
TRIM3-206ENST00000528227 ADAMTSL4-AS1Q5T5F5 129 aa14.38□□□□□ -0.11
TRIM3-206ENST00000528227 A0A0J9YXY3 114 aa14.37□□□□□ -0.11
TRIM3-206ENST00000528227 C9orf153Q5TBE3 101 aa14.37□□□□□ -0.11
TRIM3-206ENST00000528227 KRTAP9-6A0A140TA67 174 aa14.35□□□□□ -0.11
TRIM3-206ENST00000528227 ST20-AS1Q8NBB2 130 aa14.35□□□□□ -0.11
TRIM3-206ENST00000528227 LINC01547P58512 204 aaPredicted RBP14.34□□□□□ -0.11
TRIM3-206ENST00000528227 E9PLD3 99 aa14.33□□□□□ -0.12
TRIM3-206ENST00000528227 XP32Q5T750 250 aa14.33□□□□□ -0.12
TRIM3-206ENST00000528227 C5orf52A6NGY3 159 aa14.32□□□□□ -0.12
TRIM3-206ENST00000528227 CBY1Q9Y3M2 126 aa14.29□□□□□ -0.12
TRIM3-206ENST00000528227 HINT1P49773 126 aaPredicted RBP14.28□□□□□ -0.12
TRIM3-206ENST00000528227 COLCA2A8K830 154 aa14.27□□□□□ -0.13
TRIM3-206ENST00000528227 LITAFQ99732 161 aa14.27□□□□□ -0.13
TRIM3-206ENST00000528227 SPANXCQ9NY87 97 aa14.26□□□□□ -0.13
TRIM3-206ENST00000528227 SPRR1BP22528 89 aa14.25□□□□□ -0.13
TRIM3-206ENST00000528227 LINC00308Q8TCZ7 52 aa14.25□□□□□ -0.13
TRIM3-206ENST00000528227 SYS1-DBNDD2H3BUS1 97 aa14.22□□□□□ -0.13
TRIM3-206ENST00000528227 OR13C6PQ8NH95 151 aa14.22□□□□□ -0.13
TRIM3-206ENST00000528227 TIMM17BO60830 172 aa14.21□□□□□ -0.13
TRIM3-206ENST00000528227 SLC25A34Q6PIV7 304 aa14.2□□□□□ -0.14
TRIM3-206ENST00000528227 DHRS4-AS1Q9P1J3 65 aa14.2□□□□□ -0.14
TRIM3-206ENST00000528227 LIMD2Q9BT23 127 aa14.18□□□□□ -0.14
TRIM3-206ENST00000528227 SPANXDQ9BXN6 97 aa14.18□□□□□ -0.14
TRIM3-206ENST00000528227 HRCT1Q6UXD1 115 aa14.17□□□□□ -0.14
TRIM3-206ENST00000528227 LINC01545Q5VT33 79 aa14.15□□□□□ -0.14
TRIM3-206ENST00000528227 SLC7A5P1Q8MH63 180 aa14.15□□□□□ -0.14
TRIM3-206ENST00000528227 LAMTOR3Q9UHA4 124 aa14.15□□□□□ -0.14
TRIM3-206ENST00000528227 ELOF1P60002 83 aaKnown RBP14.14□□□□□ -0.15
TRIM3-206ENST00000528227 ZNF815PA8K554 130 aa14.13□□□□□ -0.15
TRIM3-206ENST00000528227 COX7BP24311 80 aa14.12□□□□□ -0.15
TRIM3-206ENST00000528227 LCE2CQ5TA81 110 aa14.12□□□□□ -0.15
TRIM3-206ENST00000528227 LCE2DQ5TA82 110 aaPredicted RBP14.12□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BKO60814 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BJP06899 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BOP23527 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BBP33778 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BDP58876 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BCP62807 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST2H2BEQ16778 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 C6orf99Q4VX62 202 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BHQ93079 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BNQ99877 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 HIST1H2BMQ99879 126 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 TTTY13Q9BZ97 58 aa14.11□□□□□ -0.15
TRIM3-206ENST00000528227 PET117Q6UWS5 81 aa14.1□□□□□ -0.15
TRIM3-206ENST00000528227 LINC00518Q8N0U6 118 aa14.1□□□□□ -0.15
TRIM3-206ENST00000528227 C9orf92A6NGG3 77 aa14.07□□□□□ -0.16
TRIM3-206ENST00000528227 Q1RN00 199 aa14.07□□□□□ -0.16
TRIM3-206ENST00000528227 KRTAP19-2Q3LHN2 52 aa14.07□□□□□ -0.16
TRIM3-206ENST00000528227 PCOTHQ58A44 107 aa14.07□□□□□ -0.16
TRIM3-206ENST00000528227 CD164Q04900 197 aa14.06□□□□□ -0.16
TRIM3-206ENST00000528227 TAL2Q16559 108 aa14.06□□□□□ -0.16
TRIM3-206ENST00000528227 DEFB105AQ8NG35 78 aa14.05□□□□□ -0.16
TRIM3-206ENST00000528227 PRO1933Q9H354 126 aa14.04□□□□□ -0.16
TRIM3-206ENST00000528227 TEX49A0A1B0GTD5 131 aa14.03□□□□□ -0.16
TRIM3-206ENST00000528227 TRBV7-6A0A0J9YX20 115 aa14.02□□□□□ -0.17
TRIM3-206ENST00000528227 C3orf79P0CE67 100 aa14.02□□□□□ -0.17
TRIM3-206ENST00000528227 IGLV8-61A0A075B6I0 122 aa14.01□□□□□ -0.17
TRIM3-206ENST00000528227 SMIM29Q86T20 159 aa14□□□□□ -0.17
TRIM3-206ENST00000528227 H7C2G1 150 aa13.98□□□□□ -0.17
TRIM3-206ENST00000528227 Q5XG85 94 aa13.98□□□□□ -0.17
TRIM3-206ENST00000528227 SCGB1D4Q6XE38 83 aa13.98□□□□□ -0.17
TRIM3-206ENST00000528227 MT1HP80294 61 aa13.97□□□□□ -0.17
TRIM3-206ENST00000528227 A0A1B0GWB2 263 aa13.96□□□□□ -0.17
TRIM3-206ENST00000528227 AKR1D1P51857 326 aa13.96□□□□□ -0.17
TRIM3-206ENST00000528227 IGLV5-48A0A075B6I7 105 aa13.95□□□□□ -0.18
TRIM3-206ENST00000528227 KRTDAPP60985 99 aa13.94□□□□□ -0.18
TRIM3-206ENST00000528227 COPS9Q8WXC6 57 aa13.94□□□□□ -0.18
TRIM3-206ENST00000528227 IFITM1P13164 125 aa13.93□□□□□ -0.18
TRIM3-206ENST00000528227 A6NDN8 102 aa13.92□□□□□ -0.18
TRIM3-206ENST00000528227 C1orf195Q5TG92 126 aa13.92□□□□□ -0.18
TRIM3-206ENST00000528227 A0A0G2JQZ4 141 aa13.91□□□□□ -0.18
TRIM3-206ENST00000528227 ANKRD39Q53RE8 183 aa13.91□□□□□ -0.18
TRIM3-206ENST00000528227 COA6Q5JTJ3 125 aaKnown RBP13.9□□□□□ -0.18
TRIM3-206ENST00000528227 Q6ZVH6 145 aa13.89□□□□□ -0.19
TRIM3-206ENST00000528227 MUSTN1Q8IVN3 82 aa13.88□□□□□ -0.19
TRIM3-206ENST00000528227 A4D1N5 150 aa13.87□□□□□ -0.19
TRIM3-206ENST00000528227 CRCT1Q9UGL9 99 aa13.87□□□□□ -0.19
TRIM3-206ENST00000528227 C20orf202A1L168 122 aa13.86□□□□□ -0.19
TRIM3-206ENST00000528227 CFC1BP0CG36 223 aa13.86□□□□□ -0.19
TRIM3-206ENST00000528227 PCP2Q8IVA1 136 aa13.84□□□□□ -0.19
TRIM3-206ENST00000528227 ATOH7Q8N100 152 aa13.84□□□□□ -0.19
TRIM3-206ENST00000528227 RPL37P61927 97 aaKnown RBP13.82□□□□□ -0.2
TRIM3-206ENST00000528227 SMIM11BQ8TCY0 68 aa13.82□□□□□ -0.2
TRIM3-206ENST00000528227 NHP2Q9NX24 153 aaKnown RBP13.82□□□□□ -0.2
TRIM3-206ENST00000528227 TRAV13-2A0A0B4J235 113 aa13.81□□□□□ -0.2
TRIM3-206ENST00000528227 FSIP2Q5CZC0 6907 aa13.79□□□□□ -0.2
TRIM3-206ENST00000528227 TCL1BO95988 128 aa13.76□□□□□ -0.21
TRIM3-206ENST00000528227 LORP23490 312 aaPredicted RBP13.76□□□□□ -0.21
TRIM3-206ENST00000528227 KRTAP10-6P60371 365 aaPredicted RBP13.74□□□□□ -0.21
TRIM3-206ENST00000528227 F8WEM9 126 aa13.71□□□□□ -0.21
TRIM3-206ENST00000528227 SNRPEP62304 92 aaKnown RBP13.69□□□□□ -0.22
TRIM3-206ENST00000528227 VAMP3Q15836 100 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms