RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 LINC00310P59036 64 aa9.05□□□□□ -0.96
HIF3A-208ENST00000524533 PMCHL2Q9BQD1 86 aa9.05□□□□□ -0.96
HIF3A-208ENST00000524533 IGKCP01834 107 aa9.04□□□□□ -0.96
HIF3A-208ENST00000524533 HSPB8Q9UJY1 196 aa9.04□□□□□ -0.96
HIF3A-208ENST00000524533 ZNF73O43830 326 aaPredicted RBP9.03□□□□□ -0.96
HIF3A-208ENST00000524533 FABP4P15090 132 aa9.03□□□□□ -0.96
HIF3A-208ENST00000524533 NPC2P61916 151 aa9.03□□□□□ -0.96
HIF3A-208ENST00000524533 XP32Q5T750 250 aa9.03□□□□□ -0.96
HIF3A-208ENST00000524533 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.97
HIF3A-208ENST00000524533 ST20-AS1Q8NBB2 130 aa9.01□□□□□ -0.97
HIF3A-208ENST00000524533 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
HIF3A-208ENST00000524533 A0A0J9YXY3 114 aa8.99□□□□□ -0.97
HIF3A-208ENST00000524533 ADAMTSL4-AS1Q5T5F5 129 aa8.99□□□□□ -0.97
HIF3A-208ENST00000524533 CBY1Q9Y3M2 126 aa8.99□□□□□ -0.97
HIF3A-208ENST00000524533 C5orf52A6NGY3 159 aa8.98□□□□□ -0.97
HIF3A-208ENST00000524533 HINT1P49773 126 aaPredicted RBP8.98□□□□□ -0.97
HIF3A-208ENST00000524533 E9PLD3 99 aa8.96□□□□□ -0.98
HIF3A-208ENST00000524533 LIMD2Q9BT23 127 aa8.95□□□□□ -0.98
HIF3A-208ENST00000524533 SPANXCQ9NY87 97 aa8.95□□□□□ -0.98
HIF3A-208ENST00000524533 SLC25A34Q6PIV7 304 aa8.94□□□□□ -0.98
HIF3A-208ENST00000524533 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
HIF3A-208ENST00000524533 SPRR1BP22528 89 aa8.93□□□□□ -0.98
HIF3A-208ENST00000524533 LINC00308Q8TCZ7 52 aa8.93□□□□□ -0.98
HIF3A-208ENST00000524533 DHRS4-AS1Q9P1J3 65 aa8.93□□□□□ -0.98
HIF3A-208ENST00000524533 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
HIF3A-208ENST00000524533 HRCT1Q6UXD1 115 aa8.92□□□□□ -0.98
HIF3A-208ENST00000524533 LITAFQ99732 161 aa8.91□□□□□ -0.98
HIF3A-208ENST00000524533 SPANXDQ9BXN6 97 aa8.9□□□□□ -0.98
HIF3A-208ENST00000524533 LAMTOR3Q9UHA4 124 aa8.9□□□□□ -0.98
HIF3A-208ENST00000524533 TIMM17BO60830 172 aa8.89□□□□□ -0.99
HIF3A-208ENST00000524533 C9orf92A6NGG3 77 aa8.88□□□□□ -0.99
HIF3A-208ENST00000524533 SYS1-DBNDD2H3BUS1 97 aa8.88□□□□□ -0.99
HIF3A-208ENST00000524533 LCE2CQ5TA81 110 aa8.88□□□□□ -0.99
HIF3A-208ENST00000524533 COLCA2A8K830 154 aa8.87□□□□□ -0.99
HIF3A-208ENST00000524533 COX7BP24311 80 aa8.87□□□□□ -0.99
HIF3A-208ENST00000524533 ELOF1P60002 83 aaKnown RBP8.87□□□□□ -0.99
HIF3A-208ENST00000524533 PCOTHQ58A44 107 aa8.87□□□□□ -0.99
HIF3A-208ENST00000524533 ZNF815PA8K554 130 aa8.86□□□□□ -0.99
HIF3A-208ENST00000524533 IGLV8-61A0A075B6I0 122 aa8.85□□□□□ -0.99
HIF3A-208ENST00000524533 Q1RN00 199 aa8.85□□□□□ -0.99
HIF3A-208ENST00000524533 C6orf99Q4VX62 202 aa8.85□□□□□ -0.99
HIF3A-208ENST00000524533 TAL2Q16559 108 aa8.84□□□□□ -0.99
HIF3A-208ENST00000524533 LINC01545Q5VT33 79 aa8.84□□□□□ -0.99
HIF3A-208ENST00000524533 LINC00518Q8N0U6 118 aa8.84□□□□□ -0.99
HIF3A-208ENST00000524533 CD164Q04900 197 aa8.83□□□□□ -1
HIF3A-208ENST00000524533 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
HIF3A-208ENST00000524533 DEFB105AQ8NG35 78 aa8.83□□□□□ -1
HIF3A-208ENST00000524533 PRO1933Q9H354 126 aa8.83□□□□□ -1
HIF3A-208ENST00000524533 TTTY13Q9BZ97 58 aa8.82□□□□□ -1
HIF3A-208ENST00000524533 TEX49A0A1B0GTD5 131 aa8.81□□□□□ -1
HIF3A-208ENST00000524533 H7C2G1 150 aa8.81□□□□□ -1
HIF3A-208ENST00000524533 MT1HP80294 61 aa8.81□□□□□ -1
HIF3A-208ENST00000524533 PET117Q6UWS5 81 aa8.81□□□□□ -1
HIF3A-208ENST00000524533 FSIP2Q5CZC0 6907 aa8.8□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BKO60814 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BJP06899 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BOP23527 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BBP33778 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BDP58876 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BCP62807 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST2H2BEQ16778 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BHQ93079 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BNQ99877 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 HIST1H2BMQ99879 126 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 CRCT1Q9UGL9 99 aa8.79□□□□□ -1
HIF3A-208ENST00000524533 TRBV7-6A0A0J9YX20 115 aa8.78□□□□□ -1
HIF3A-208ENST00000524533 SLC7A5P1Q8MH63 180 aa8.78□□□□□ -1
HIF3A-208ENST00000524533 CFC1BP0CG36 223 aa8.77□□□□□ -1.01
HIF3A-208ENST00000524533 AKR1D1P51857 326 aa8.77□□□□□ -1.01
HIF3A-208ENST00000524533 SCGB1D4Q6XE38 83 aa8.77□□□□□ -1.01
HIF3A-208ENST00000524533 A0A1B0GWB2 263 aa8.76□□□□□ -1.01
HIF3A-208ENST00000524533 Q5XG85 94 aa8.76□□□□□ -1.01
HIF3A-208ENST00000524533 SMIM29Q86T20 159 aa8.76□□□□□ -1.01
HIF3A-208ENST00000524533 COPS9Q8WXC6 57 aa8.76□□□□□ -1.01
HIF3A-208ENST00000524533 C3orf79P0CE67 100 aa8.75□□□□□ -1.01
HIF3A-208ENST00000524533 IGLV5-48A0A075B6I7 105 aa8.74□□□□□ -1.01
HIF3A-208ENST00000524533 A6NDN8 102 aa8.74□□□□□ -1.01
HIF3A-208ENST00000524533 C1orf195Q5TG92 126 aa8.74□□□□□ -1.01
HIF3A-208ENST00000524533 A0A0G2JQZ4 141 aa8.72□□□□□ -1.01
HIF3A-208ENST00000524533 IFITM1P13164 125 aa8.72□□□□□ -1.01
HIF3A-208ENST00000524533 KRTDAPP60985 99 aa8.71□□□□□ -1.02
HIF3A-208ENST00000524533 RPL37P61927 97 aaKnown RBP8.71□□□□□ -1.02
HIF3A-208ENST00000524533 NHP2Q9NX24 153 aaKnown RBP8.7□□□□□ -1.02
HIF3A-208ENST00000524533 C20orf202A1L168 122 aa8.69□□□□□ -1.02
HIF3A-208ENST00000524533 A4D1N5 150 aa8.69□□□□□ -1.02
HIF3A-208ENST00000524533 ANKRD39Q53RE8 183 aa8.69□□□□□ -1.02
HIF3A-208ENST00000524533 Q6ZVH6 145 aa8.69□□□□□ -1.02
HIF3A-208ENST00000524533 LORP23490 312 aaPredicted RBP8.68□□□□□ -1.02
HIF3A-208ENST00000524533 MUSTN1Q8IVN3 82 aa8.68□□□□□ -1.02
HIF3A-208ENST00000524533 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
HIF3A-208ENST00000524533 TRAV13-2A0A0B4J235 113 aa8.66□□□□□ -1.02
HIF3A-208ENST00000524533 TCL1BO95988 128 aa8.66□□□□□ -1.02
HIF3A-208ENST00000524533 COX6B2Q6YFQ2 88 aa8.66□□□□□ -1.02
HIF3A-208ENST00000524533 F8WEM9 126 aa8.65□□□□□ -1.02
HIF3A-208ENST00000524533 M0R2T5 61 aa8.65□□□□□ -1.02
HIF3A-208ENST00000524533 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
HIF3A-208ENST00000524533 SMIM11BQ8TCY0 68 aa8.65□□□□□ -1.02
HIF3A-208ENST00000524533 COA6Q5JTJ3 125 aaKnown RBP8.64□□□□□ -1.03
HIF3A-208ENST00000524533 PCP2Q8IVA1 136 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms