RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 CCKP06307 115 aa7.83□□□□□ -1.16
SCUBE2-208ENST00000524317 RBM3P98179 157 aaKnown RBP7.83□□□□□ -1.16
SCUBE2-208ENST00000524317 SPAG11BQ08648 103 aa7.83□□□□□ -1.16
SCUBE2-208ENST00000524317 COX17Q14061 63 aa7.83□□□□□ -1.16
SCUBE2-208ENST00000524317 TM2D3Q9BRN9 247 aa7.83□□□□□ -1.16
SCUBE2-208ENST00000524317 C9orf116Q5BN46 136 aaPredicted RBP7.83□□□□□ -1.16
SCUBE2-208ENST00000524317 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
SCUBE2-208ENST00000524317 C6orf223Q8N319 242 aa7.83□□□□□ -1.16
SCUBE2-208ENST00000524317 LINC00474Q9P2X8 69 aa7.82□□□□□ -1.16
SCUBE2-208ENST00000524317 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
SCUBE2-208ENST00000524317 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
SCUBE2-208ENST00000524317 NDUFC1O43677 76 aa7.81□□□□□ -1.16
SCUBE2-208ENST00000524317 UNQ6190/PRO20217Q6UXQ8 127 aa7.81□□□□□ -1.16
SCUBE2-208ENST00000524317 SMIM11BQ8TCY0 68 aa7.8□□□□□ -1.16
SCUBE2-208ENST00000524317 NBEAL1Q6ZS30 2694 aa7.8□□□□□ -1.16
SCUBE2-208ENST00000524317 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
SCUBE2-208ENST00000524317 F8WEM9 126 aa7.79□□□□□ -1.16
SCUBE2-208ENST00000524317 H0YGX0 51 aa7.79□□□□□ -1.16
SCUBE2-208ENST00000524317 NCR3O14931 201 aa7.79□□□□□ -1.16
SCUBE2-208ENST00000524317 LINC01556Q5JQF7 62 aa7.79□□□□□ -1.16
SCUBE2-208ENST00000524317 KRTAP26-1Q6PEX3 210 aa7.79□□□□□ -1.16
SCUBE2-208ENST00000524317 A0A087WYN8 130 aa7.78□□□□□ -1.16
SCUBE2-208ENST00000524317 TRAV10A0A0B4J240 114 aa7.78□□□□□ -1.16
SCUBE2-208ENST00000524317 PRR3P79522 188 aaKnown RBP7.78□□□□□ -1.16
SCUBE2-208ENST00000524317 GVQW2A0A096LPI5 108 aaPredicted RBP7.77□□□□□ -1.17
SCUBE2-208ENST00000524317 SNURFQ9Y675 71 aa7.77□□□□□ -1.17
SCUBE2-208ENST00000524317 MGAM2Q2M2H8 2515 aa7.76□□□□□ -1.17
SCUBE2-208ENST00000524317 Q8NDZ9 215 aa7.76□□□□□ -1.17
SCUBE2-208ENST00000524317 RMI2Q96E14 147 aa7.76□□□□□ -1.17
SCUBE2-208ENST00000524317 UBL5Q9BZL1 73 aa7.76□□□□□ -1.17
SCUBE2-208ENST00000524317 LAMTOR3Q9UHA4 124 aa7.76□□□□□ -1.17
SCUBE2-208ENST00000524317 DNAH1Q9P2D7 4330 aa7.76□□□□□ -1.17
SCUBE2-208ENST00000524317 MUC7Q8TAX7 377 aa7.75□□□□□ -1.17
SCUBE2-208ENST00000524317 C6orf48Q9UBA6 75 aa7.75□□□□□ -1.17
SCUBE2-208ENST00000524317 HIGD2BQ4VC39 106 aa7.75□□□□□ -1.17
SCUBE2-208ENST00000524317 ORMDL1Q9P0S3 153 aa7.75□□□□□ -1.17
SCUBE2-208ENST00000524317 DNAH9Q9NYC9 4486 aa7.75□□□□□ -1.17
SCUBE2-208ENST00000524317 JMJD7-PLA2G4BH0Y9G9 81 aa7.74□□□□□ -1.17
SCUBE2-208ENST00000524317 LECT2O14960 151 aa7.74□□□□□ -1.17
SCUBE2-208ENST00000524317 DNAH10OSP0CZ25 163 aa7.74□□□□□ -1.17
SCUBE2-208ENST00000524317 PRR15Q8IV56 129 aa7.74□□□□□ -1.17
SCUBE2-208ENST00000524317 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
SCUBE2-208ENST00000524317 LINC00588Q9Y4M8 146 aa7.73□□□□□ -1.17
SCUBE2-208ENST00000524317 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
SCUBE2-208ENST00000524317 IGKV2D-24A0A075B6R9 120 aa7.72□□□□□ -1.17
SCUBE2-208ENST00000524317 Q6ZRU5 148 aa7.72□□□□□ -1.17
SCUBE2-208ENST00000524317 CAMK2N2Q96S95 79 aa7.72□□□□□ -1.17
SCUBE2-208ENST00000524317 WWC2-AS2Q96NR7 200 aa7.7□□□□□ -1.18
SCUBE2-208ENST00000524317 XAGE1AQ9HD64 81 aa7.69□□□□□ -1.18
SCUBE2-208ENST00000524317 SLPIP03973 132 aa7.68□□□□□ -1.18
SCUBE2-208ENST00000524317 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
SCUBE2-208ENST00000524317 IGLV6-57P01721 117 aa7.67□□□□□ -1.18
SCUBE2-208ENST00000524317 TMEM256-PLSCR3K7ERE1 68 aa7.66□□□□□ -1.18
SCUBE2-208ENST00000524317 C6orf99Q4VX62 202 aa7.66□□□□□ -1.18
SCUBE2-208ENST00000524317 TRBV7-4A0A0J9YYF1 115 aa7.66□□□□□ -1.18
SCUBE2-208ENST00000524317 MRPL55Q7Z7F7 128 aaKnown RBP7.66□□□□□ -1.18
SCUBE2-208ENST00000524317 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
SCUBE2-208ENST00000524317 LYSTQ99698 3801 aa7.64□□□□□ -1.19
SCUBE2-208ENST00000524317 LINC01547P58512 204 aaPredicted RBP7.64□□□□□ -1.19
SCUBE2-208ENST00000524317 SYCNQ0VAF6 134 aa7.64□□□□□ -1.19
SCUBE2-208ENST00000524317 Q8N814 137 aa7.64□□□□□ -1.19
SCUBE2-208ENST00000524317 CASC10Q5T4H9 136 aa7.63□□□□□ -1.19
SCUBE2-208ENST00000524317 Q6ZRP5 223 aa7.63□□□□□ -1.19
SCUBE2-208ENST00000524317 B9D2Q9BPU9 175 aa7.63□□□□□ -1.19
SCUBE2-208ENST00000524317 DYNC2H1Q8NCM8 4307 aaKnown RBP7.63□□□□□ -1.19
SCUBE2-208ENST00000524317 ERC2-IT1O76042 136 aa7.62□□□□□ -1.19
SCUBE2-208ENST00000524317 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
SCUBE2-208ENST00000524317 DNHD1Q96M86 4753 aa7.62□□□□□ -1.19
SCUBE2-208ENST00000524317 IGLV5-52A0A0A0MRZ9 124 aa7.62□□□□□ -1.19
SCUBE2-208ENST00000524317 CXCL6P80162 114 aa7.62□□□□□ -1.19
SCUBE2-208ENST00000524317 HAMPP81172 84 aa7.62□□□□□ -1.19
SCUBE2-208ENST00000524317 STAB2Q8WWQ8 2551 aa7.62□□□□□ -1.19
SCUBE2-208ENST00000524317 LINC00575Q6W349 94 aa7.61□□□□□ -1.19
SCUBE2-208ENST00000524317 FUSP35637 526 aaKnown RBP eCLIP7.6□□□□□ -1.19
SCUBE2-208ENST00000524317 NREPQ16612 68 aa7.6□□□□□ -1.19
SCUBE2-208ENST00000524317 LINC00476Q8WZB0 136 aa7.6□□□□□ -1.19
SCUBE2-208ENST00000524317 PLECQ15149 4684 aaKnown RBP7.59□□□□□ -1.19
SCUBE2-208ENST00000524317 DNAH10Q8IVF4 4471 aa7.59□□□□□ -1.19
SCUBE2-208ENST00000524317 COL7A1Q02388 2944 aa7.59□□□□□ -1.19
SCUBE2-208ENST00000524317 M0R378 163 aa7.58□□□□□ -1.2
SCUBE2-208ENST00000524317 ZNF73O43830 326 aaPredicted RBP7.58□□□□□ -1.2
SCUBE2-208ENST00000524317 Q6ZQT0 140 aa7.58□□□□□ -1.2
SCUBE2-208ENST00000524317 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
SCUBE2-208ENST00000524317 APLNQ9ULZ1 77 aa7.58□□□□□ -1.2
SCUBE2-208ENST00000524317 LOC110117498A0A087WWA1 95 aa7.57□□□□□ -1.2
SCUBE2-208ENST00000524317 TLX1NBP0CAT3 122 aa7.57□□□□□ -1.2
SCUBE2-208ENST00000524317 KRTAP1-5Q9BYS1 174 aa7.57□□□□□ -1.2
SCUBE2-208ENST00000524317 Q1T7F1 81 aa7.57□□□□□ -1.2
SCUBE2-208ENST00000524317 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
SCUBE2-208ENST00000524317 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
SCUBE2-208ENST00000524317 C8orf87E5RJ46 101 aa7.55□□□□□ -1.2
SCUBE2-208ENST00000524317 BPY2O14599 106 aa7.54□□□□□ -1.2
SCUBE2-208ENST00000524317 ELOF1P60002 83 aaKnown RBP7.54□□□□□ -1.2
SCUBE2-208ENST00000524317 UBE2DNLQ8IWF7 75 aa7.54□□□□□ -1.2
SCUBE2-208ENST00000524317 PDE6GP18545 87 aa7.53□□□□□ -1.2
SCUBE2-208ENST00000524317 COX7BP24311 80 aa7.53□□□□□ -1.2
SCUBE2-208ENST00000524317 Q6ZQY7 126 aa7.52□□□□□ -1.2
SCUBE2-208ENST00000524317 DNAH7Q8WXX0 4024 aa7.52□□□□□ -1.21
SCUBE2-208ENST00000524317 hDV103S1A0JD37 113 aa7.52□□□□□ -1.21
SCUBE2-208ENST00000524317 REG3GQ6UW15 175 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms