RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 HSPB8Q9UJY1 196 aa10.46□□□□□ -0.73
PTP4A3-206ENST00000524028 NPC2P61916 151 aa10.45□□□□□ -0.74
PTP4A3-206ENST00000524028 SLC25A20O43772 301 aa10.44□□□□□ -0.74
PTP4A3-206ENST00000524028 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
PTP4A3-206ENST00000524028 A0A0J9YXY3 114 aa10.43□□□□□ -0.74
PTP4A3-206ENST00000524028 ZNF73O43830 326 aaPredicted RBP10.43□□□□□ -0.74
PTP4A3-206ENST00000524028 SEC61BP60468 96 aaKnown RBP10.43□□□□□ -0.74
PTP4A3-206ENST00000524028 KRTAP9-6A0A140TA67 174 aa10.42□□□□□ -0.74
PTP4A3-206ENST00000524028 JOSD1Q15040 202 aaPredicted RBP10.42□□□□□ -0.74
PTP4A3-206ENST00000524028 C9orf153Q5TBE3 101 aa10.41□□□□□ -0.74
PTP4A3-206ENST00000524028 E9PLD3 99 aa10.39□□□□□ -0.75
PTP4A3-206ENST00000524028 XP32Q5T750 250 aa10.39□□□□□ -0.75
PTP4A3-206ENST00000524028 COLCA2A8K830 154 aa10.38□□□□□ -0.75
PTP4A3-206ENST00000524028 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
PTP4A3-206ENST00000524028 LITAFQ99732 161 aa10.37□□□□□ -0.75
PTP4A3-206ENST00000524028 C5orf52A6NGY3 159 aa10.34□□□□□ -0.75
PTP4A3-206ENST00000524028 LINC00308Q8TCZ7 52 aa10.34□□□□□ -0.75
PTP4A3-206ENST00000524028 SPRR1BP22528 89 aa10.33□□□□□ -0.76
PTP4A3-206ENST00000524028 HINT1P49773 126 aaPredicted RBP10.32□□□□□ -0.76
PTP4A3-206ENST00000524028 SLC7A5P1Q8MH63 180 aa10.32□□□□□ -0.76
PTP4A3-206ENST00000524028 SPANXCQ9NY87 97 aa10.32□□□□□ -0.76
PTP4A3-206ENST00000524028 SYS1-DBNDD2H3BUS1 97 aa10.31□□□□□ -0.76
PTP4A3-206ENST00000524028 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
PTP4A3-206ENST00000524028 LCE2CQ5TA81 110 aa10.3□□□□□ -0.76
PTP4A3-206ENST00000524028 HRCT1Q6UXD1 115 aa10.3□□□□□ -0.76
PTP4A3-206ENST00000524028 CBY1Q9Y3M2 126 aa10.3□□□□□ -0.76
PTP4A3-206ENST00000524028 TIMM17BO60830 172 aa10.29□□□□□ -0.76
PTP4A3-206ENST00000524028 TTTY13Q9BZ97 58 aa10.28□□□□□ -0.76
PTP4A3-206ENST00000524028 DHRS4-AS1Q9P1J3 65 aa10.28□□□□□ -0.76
PTP4A3-206ENST00000524028 LINC01545Q5VT33 79 aa10.27□□□□□ -0.77
PTP4A3-206ENST00000524028 SPANXDQ9BXN6 97 aa10.27□□□□□ -0.77
PTP4A3-206ENST00000524028 ZNF815PA8K554 130 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BKO60814 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BJP06899 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BOP23527 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BBP33778 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BDP58876 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 ELOF1P60002 83 aaKnown RBP10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BCP62807 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST2H2BEQ16778 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 KRTAP19-2Q3LHN2 52 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 LCE2DQ5TA82 110 aaPredicted RBP10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 SLC25A34Q6PIV7 304 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BHQ93079 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BNQ99877 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 HIST1H2BMQ99879 126 aa10.25□□□□□ -0.77
PTP4A3-206ENST00000524028 COX7BP24311 80 aa10.24□□□□□ -0.77
PTP4A3-206ENST00000524028 LIMD2Q9BT23 127 aa10.24□□□□□ -0.77
PTP4A3-206ENST00000524028 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
PTP4A3-206ENST00000524028 C9orf92A6NGG3 77 aa10.23□□□□□ -0.77
PTP4A3-206ENST00000524028 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
PTP4A3-206ENST00000524028 PCOTHQ58A44 107 aa10.22□□□□□ -0.77
PTP4A3-206ENST00000524028 PET117Q6UWS5 81 aa10.22□□□□□ -0.77
PTP4A3-206ENST00000524028 Q1RN00 199 aa10.21□□□□□ -0.77
PTP4A3-206ENST00000524028 DEFB105AQ8NG35 78 aa10.21□□□□□ -0.77
PTP4A3-206ENST00000524028 LINC00518Q8N0U6 118 aa10.2□□□□□ -0.78
PTP4A3-206ENST00000524028 TAL2Q16559 108 aa10.19□□□□□ -0.78
PTP4A3-206ENST00000524028 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
PTP4A3-206ENST00000524028 IGLV8-61A0A075B6I0 122 aa10.17□□□□□ -0.78
PTP4A3-206ENST00000524028 CD164Q04900 197 aa10.17□□□□□ -0.78
PTP4A3-206ENST00000524028 SMIM29Q86T20 159 aa10.17□□□□□ -0.78
PTP4A3-206ENST00000524028 PRO1933Q9H354 126 aa10.17□□□□□ -0.78
PTP4A3-206ENST00000524028 TEX49A0A1B0GTD5 131 aa10.16□□□□□ -0.78
PTP4A3-206ENST00000524028 H7C2G1 150 aa10.16□□□□□ -0.78
PTP4A3-206ENST00000524028 MT1HP80294 61 aa10.15□□□□□ -0.78
PTP4A3-206ENST00000524028 A0A0G2JQZ4 141 aa10.14□□□□□ -0.79
PTP4A3-206ENST00000524028 TRBV7-6A0A0J9YX20 115 aa10.14□□□□□ -0.79
PTP4A3-206ENST00000524028 KRTDAPP60985 99 aa10.12□□□□□ -0.79
PTP4A3-206ENST00000524028 ANKRD39Q53RE8 183 aa10.12□□□□□ -0.79
PTP4A3-206ENST00000524028 Q5XG85 94 aa10.12□□□□□ -0.79
PTP4A3-206ENST00000524028 SCGB1D4Q6XE38 83 aa10.12□□□□□ -0.79
PTP4A3-206ENST00000524028 IGLV5-48A0A075B6I7 105 aa10.11□□□□□ -0.79
PTP4A3-206ENST00000524028 A0A1B0GWB2 263 aa10.11□□□□□ -0.79
PTP4A3-206ENST00000524028 AKR1D1P51857 326 aa10.11□□□□□ -0.79
PTP4A3-206ENST00000524028 C1orf195Q5TG92 126 aa10.11□□□□□ -0.79
PTP4A3-206ENST00000524028 A6NDN8 102 aa10.1□□□□□ -0.79
PTP4A3-206ENST00000524028 MUSTN1Q8IVN3 82 aa10.09□□□□□ -0.79
PTP4A3-206ENST00000524028 IFITM1P13164 125 aa10.08□□□□□ -0.8
PTP4A3-206ENST00000524028 COA6Q5JTJ3 125 aaKnown RBP10.08□□□□□ -0.8
PTP4A3-206ENST00000524028 CRCT1Q9UGL9 99 aa10.08□□□□□ -0.8
PTP4A3-206ENST00000524028 ATOH7Q8N100 152 aa10.07□□□□□ -0.8
PTP4A3-206ENST00000524028 FSIP2Q5CZC0 6907 aa10.07□□□□□ -0.8
PTP4A3-206ENST00000524028 PCP2Q8IVA1 136 aa10.06□□□□□ -0.8
PTP4A3-206ENST00000524028 Q6ZVH6 145 aa10.05□□□□□ -0.8
PTP4A3-206ENST00000524028 COPS9Q8WXC6 57 aa10.05□□□□□ -0.8
PTP4A3-206ENST00000524028 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
PTP4A3-206ENST00000524028 C20orf202A1L168 122 aa10.02□□□□□ -0.81
PTP4A3-206ENST00000524028 A4D1N5 150 aa10.02□□□□□ -0.81
PTP4A3-206ENST00000524028 RPL37P61927 97 aaKnown RBP10.02□□□□□ -0.81
PTP4A3-206ENST00000524028 CFC1BP0CG36 223 aa10.01□□□□□ -0.81
PTP4A3-206ENST00000524028 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
PTP4A3-206ENST00000524028 TRAV13-2A0A0B4J235 113 aa9.99□□□□□ -0.81
PTP4A3-206ENST00000524028 KRTAP10-6P60371 365 aaPredicted RBP9.99□□□□□ -0.81
PTP4A3-206ENST00000524028 NHP2Q9NX24 153 aaKnown RBP9.98□□□□□ -0.81
PTP4A3-206ENST00000524028 TCL1BO95988 128 aa9.95□□□□□ -0.82
PTP4A3-206ENST00000524028 LINC00575Q6W349 94 aa9.93□□□□□ -0.82
PTP4A3-206ENST00000524028 F8WEM9 126 aa9.91□□□□□ -0.82
PTP4A3-206ENST00000524028 SNRPEP62304 92 aaKnown RBP9.9□□□□□ -0.82
PTP4A3-206ENST00000524028 VAMP3Q15836 100 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms