RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 C6orf99Q4VX62 202 aa4.45□□□□□ -1.7
CSMD1-211ENST00000523062 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
CSMD1-211ENST00000523062 NKAPP1Q8N9T2 125 aa4.45□□□□□ -1.7
CSMD1-211ENST00000523062 DIRC1Q969H9 104 aa4.45□□□□□ -1.7
CSMD1-211ENST00000523062 VPS25Q9BRG1 176 aa4.45□□□□□ -1.7
CSMD1-211ENST00000523062 BAALC-AS2P0C853 105 aa4.44□□□□□ -1.7
CSMD1-211ENST00000523062 CNBPP62633 177 aaKnown RBP4.44□□□□□ -1.7
CSMD1-211ENST00000523062 COL7A1Q02388 2944 aa4.43□□□□□ -1.7
CSMD1-211ENST00000523062 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
CSMD1-211ENST00000523062 IGLV5-37A0A075B6J1 123 aa4.43□□□□□ -1.7
CSMD1-211ENST00000523062 TRBV7-6A0A0J9YX20 115 aa4.43□□□□□ -1.7
CSMD1-211ENST00000523062 ZNF73O43830 326 aaPredicted RBP4.43□□□□□ -1.7
CSMD1-211ENST00000523062 LINC00167Q96N53 147 aa4.43□□□□□ -1.7
CSMD1-211ENST00000523062 ORMDL1Q9P0S3 153 aa4.43□□□□□ -1.7
CSMD1-211ENST00000523062 PKIGQ9Y2B9 76 aa4.43□□□□□ -1.7
CSMD1-211ENST00000523062 TEX49A0A1B0GTD5 131 aa4.42□□□□□ -1.7
CSMD1-211ENST00000523062 COX7BP24311 80 aa4.42□□□□□ -1.7
CSMD1-211ENST00000523062 GAGE2BQ13066 116 aa4.42□□□□□ -1.7
CSMD1-211ENST00000523062 SERTAD4-AS1Q5TG53 156 aa4.42□□□□□ -1.7
CSMD1-211ENST00000523062 LINC00575Q6W349 94 aa4.42□□□□□ -1.7
CSMD1-211ENST00000523062 Q8N814 137 aa4.42□□□□□ -1.7
CSMD1-211ENST00000523062 TGP01266 2768 aa4.42□□□□□ -1.7
CSMD1-211ENST00000523062 hADV29S1A0JD25 119 aa4.41□□□□□ -1.7
CSMD1-211ENST00000523062 INAFM2P0DMQ5 153 aa4.41□□□□□ -1.7
CSMD1-211ENST00000523062 ELOF1P60002 83 aaKnown RBP4.41□□□□□ -1.7
CSMD1-211ENST00000523062 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
CSMD1-211ENST00000523062 C7orf33Q8WU49 177 aa4.41□□□□□ -1.7
CSMD1-211ENST00000523062 PRKDCP78527 4128 aaKnown RBP4.41□□□□□ -1.7
CSMD1-211ENST00000523062 LRCOL1A6NCL2 159 aa4.4□□□□□ -1.71
CSMD1-211ENST00000523062 C16orf90A8MZG2 172 aa4.4□□□□□ -1.71
CSMD1-211ENST00000523062 H3BQ85 93 aa4.4□□□□□ -1.71
CSMD1-211ENST00000523062 PRYO14603 147 aa4.4□□□□□ -1.71
CSMD1-211ENST00000523062 KCNQ1DNQ9H478 68 aa4.4□□□□□ -1.71
CSMD1-211ENST00000523062 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
CSMD1-211ENST00000523062 DNAH7Q8WXX0 4024 aa4.39□□□□□ -1.71
CSMD1-211ENST00000523062 MEGF8Q7Z7M0 2845 aa4.39□□□□□ -1.71
CSMD1-211ENST00000523062 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.39□□□□□ -1.71
CSMD1-211ENST00000523062 A0A096LNI7 61 aa4.39□□□□□ -1.71
CSMD1-211ENST00000523062 FAM240AA0A1B0GVK7 77 aa4.39□□□□□ -1.71
CSMD1-211ENST00000523062 M0R2N4 97 aa4.39□□□□□ -1.71
CSMD1-211ENST00000523062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.39□□□□□ -1.71
CSMD1-211ENST00000523062 Q6ZR54 194 aa4.39□□□□□ -1.71
CSMD1-211ENST00000523062 FAM19A5Q7Z5A7 132 aaPredicted RBP4.39□□□□□ -1.71
CSMD1-211ENST00000523062 FAM168BA1KXE4 195 aa4.38□□□□□ -1.71
CSMD1-211ENST00000523062 TMEM256-PLSCR3K7ERE1 68 aa4.38□□□□□ -1.71
CSMD1-211ENST00000523062 MRPL55Q7Z7F7 128 aaKnown RBP4.38□□□□□ -1.71
CSMD1-211ENST00000523062 OBSCN-AS1Q96MR7 158 aa4.38□□□□□ -1.71
CSMD1-211ENST00000523062 STARD9Q9P2P6 4700 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 IGLV1-50A0A075B6I6 118 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 IGKV2-24A0A0C4DH68 120 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 JMJD7-PLA2G4BH0Y9G9 81 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 Q6ZQY7 126 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 KRTAP7-1Q8IUC3 87 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 C9orf163Q8N9P6 203 aa4.37□□□□□ -1.71
CSMD1-211ENST00000523062 A0A087WTM6 91 aa4.36□□□□□ -1.71
CSMD1-211ENST00000523062 ETDCA0A1B0GVM5 59 aa4.36□□□□□ -1.71
CSMD1-211ENST00000523062 RPL37AP8A6NKH3 93 aa4.36□□□□□ -1.71
CSMD1-211ENST00000523062 ACYP1P07311 99 aa4.36□□□□□ -1.71
CSMD1-211ENST00000523062 SPRR1AP35321 89 aa4.36□□□□□ -1.71
CSMD1-211ENST00000523062 LINC00476Q8WZB0 136 aa4.36□□□□□ -1.71
CSMD1-211ENST00000523062 SIGMAR1Q99720 223 aa4.36□□□□□ -1.71
CSMD1-211ENST00000523062 LINC00474Q9P2X8 69 aa4.36□□□□□ -1.71
CSMD1-211ENST00000523062 PLECQ15149 4684 aaKnown RBP4.35□□□□□ -1.71
CSMD1-211ENST00000523062 C3orf84H3BNL1 204 aa4.35□□□□□ -1.71
CSMD1-211ENST00000523062 LY6G6CO95867 125 aa4.35□□□□□ -1.71
CSMD1-211ENST00000523062 C1orf134Q5TEV5 83 aa4.35□□□□□ -1.71
CSMD1-211ENST00000523062 C14orf132Q9NPU4 83 aa4.35□□□□□ -1.71
CSMD1-211ENST00000523062 DHRS4-AS1Q9P1J3 65 aa4.35□□□□□ -1.71
CSMD1-211ENST00000523062 B5MCH6 92 aa4.34□□□□□ -1.71
CSMD1-211ENST00000523062 KRTAP4-16G5E9R7 235 aaPredicted RBP4.34□□□□□ -1.71
CSMD1-211ENST00000523062 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
CSMD1-211ENST00000523062 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
CSMD1-211ENST00000523062 SDIM1Q6ZPB5 146 aa4.34□□□□□ -1.71
CSMD1-211ENST00000523062 Q6ZRX8 168 aa4.34□□□□□ -1.71
CSMD1-211ENST00000523062 LAMTOR3Q9UHA4 124 aa4.34□□□□□ -1.71
CSMD1-211ENST00000523062 A0A1B0GV72 72 aa4.33□□□□□ -1.72
CSMD1-211ENST00000523062 A0A1W2PNN7 141 aa4.33□□□□□ -1.72
CSMD1-211ENST00000523062 CHTF8P0CG12 524 aa4.33□□□□□ -1.72
CSMD1-211ENST00000523062 XGP55808 180 aa4.33□□□□□ -1.72
CSMD1-211ENST00000523062 VPS13DQ5THJ4 4388 aa4.32□□□□□ -1.72
CSMD1-211ENST00000523062 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
CSMD1-211ENST00000523062 RTL8CO15255 209 aa4.32□□□□□ -1.72
CSMD1-211ENST00000523062 MT-ATP8P03928 68 aa4.32□□□□□ -1.72
CSMD1-211ENST00000523062 UBE2BP63146 152 aa4.32□□□□□ -1.72
CSMD1-211ENST00000523062 RBM3P98179 157 aaKnown RBP4.32□□□□□ -1.72
CSMD1-211ENST00000523062 C21orf62-AS1Q17RA5 79 aa4.32□□□□□ -1.72
CSMD1-211ENST00000523062 LOC110117498A0A087WWA1 95 aa4.31□□□□□ -1.72
CSMD1-211ENST00000523062 CCKP06307 115 aa4.31□□□□□ -1.72
CSMD1-211ENST00000523062 SCGB1A1P11684 91 aa4.31□□□□□ -1.72
CSMD1-211ENST00000523062 PDE6GP18545 87 aa4.31□□□□□ -1.72
CSMD1-211ENST00000523062 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
CSMD1-211ENST00000523062 Q9BRP9 147 aa4.31□□□□□ -1.72
CSMD1-211ENST00000523062 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
CSMD1-211ENST00000523062 IGLV5-52A0A0A0MRZ9 124 aa4.3□□□□□ -1.72
CSMD1-211ENST00000523062 NDUFV3P56181 108 aaKnown RBP4.3□□□□□ -1.72
CSMD1-211ENST00000523062 PHF5AQ7RTV0 110 aaKnown RBP4.3□□□□□ -1.72
CSMD1-211ENST00000523062 FAM19A1Q7Z5A9 133 aa4.3□□□□□ -1.72
CSMD1-211ENST00000523062 DSCR8Q96T75 97 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms