RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 PYY3Q5JQD4 70 aa8.49□□□□□ -1.05
TRAPPC9-213ENST00000522504 HSBP1L1C9JCN9 74 aa8.48□□□□□ -1.05
TRAPPC9-213ENST00000522504 E9PLD3 99 aa8.48□□□□□ -1.05
TRAPPC9-213ENST00000522504 NCR3O14931 201 aa8.48□□□□□ -1.05
TRAPPC9-213ENST00000522504 LEPROTO15243 131 aa8.48□□□□□ -1.05
TRAPPC9-213ENST00000522504 Q8N377 158 aa8.48□□□□□ -1.05
TRAPPC9-213ENST00000522504 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
TRAPPC9-213ENST00000522504 ERC2-IT1O76042 136 aa8.47□□□□□ -1.05
TRAPPC9-213ENST00000522504 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
TRAPPC9-213ENST00000522504 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
TRAPPC9-213ENST00000522504 SFTA2Q6UW10 78 aa8.47□□□□□ -1.05
TRAPPC9-213ENST00000522504 J3QQQ9 107 aa8.46□□□□□ -1.06
TRAPPC9-213ENST00000522504 SMIM13P0DJ93 91 aa8.46□□□□□ -1.06
TRAPPC9-213ENST00000522504 LGALS3P17931 250 aaKnown RBP8.46□□□□□ -1.06
TRAPPC9-213ENST00000522504 MOBPQ13875 183 aa8.46□□□□□ -1.06
TRAPPC9-213ENST00000522504 KRTAP19-2Q3LHN2 52 aa8.46□□□□□ -1.06
TRAPPC9-213ENST00000522504 XP32Q5T750 250 aa8.46□□□□□ -1.06
TRAPPC9-213ENST00000522504 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.06
TRAPPC9-213ENST00000522504 BOD1L2Q8IYS8 172 aa8.46□□□□□ -1.06
TRAPPC9-213ENST00000522504 NMUP48645 174 aa8.45□□□□□ -1.06
TRAPPC9-213ENST00000522504 VAMP8Q9BV40 100 aa8.45□□□□□ -1.06
TRAPPC9-213ENST00000522504 IGLV9-49A0A0B4J1Y8 123 aa8.44□□□□□ -1.06
TRAPPC9-213ENST00000522504 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
TRAPPC9-213ENST00000522504 ETDCA0A1B0GVM5 59 aa8.44□□□□□ -1.06
TRAPPC9-213ENST00000522504 MIR7-3HGQ8N6C7 128 aa8.43□□□□□ -1.06
TRAPPC9-213ENST00000522504 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
TRAPPC9-213ENST00000522504 PAM16Q9Y3D7 125 aa8.43□□□□□ -1.06
TRAPPC9-213ENST00000522504 B5MCH6 92 aa8.42□□□□□ -1.06
TRAPPC9-213ENST00000522504 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
TRAPPC9-213ENST00000522504 SPATA45Q537H7 98 aa8.42□□□□□ -1.06
TRAPPC9-213ENST00000522504 TTTY13Q9BZ97 58 aa8.42□□□□□ -1.06
TRAPPC9-213ENST00000522504 MYMXA0A1B0GTQ4 84 aa8.41□□□□□ -1.06
TRAPPC9-213ENST00000522504 SMIM6P0DI80 62 aa8.41□□□□□ -1.06
TRAPPC9-213ENST00000522504 Q9BRP9 147 aa8.41□□□□□ -1.06
TRAPPC9-213ENST00000522504 ZNF815PA8K554 130 aa8.4□□□□□ -1.06
TRAPPC9-213ENST00000522504 SLC25A20O43772 301 aa8.4□□□□□ -1.06
TRAPPC9-213ENST00000522504 MT1HP80294 61 aa8.4□□□□□ -1.06
TRAPPC9-213ENST00000522504 SSBP3-AS1Q7Z2R9 100 aa8.4□□□□□ -1.06
TRAPPC9-213ENST00000522504 HERV-K104P63124 156 aa8.39□□□□□ -1.07
TRAPPC9-213ENST00000522504 S100A12P80511 92 aa8.39□□□□□ -1.07
TRAPPC9-213ENST00000522504 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
TRAPPC9-213ENST00000522504 PCP2Q8IVA1 136 aa8.39□□□□□ -1.07
TRAPPC9-213ENST00000522504 A0A0J9YXY3 114 aa8.36□□□□□ -1.07
TRAPPC9-213ENST00000522504 COX8AP10176 69 aa8.35□□□□□ -1.07
TRAPPC9-213ENST00000522504 SCGB1D4Q6XE38 83 aa8.35□□□□□ -1.07
TRAPPC9-213ENST00000522504 C14orf144Q96I85 54 aa8.35□□□□□ -1.07
TRAPPC9-213ENST00000522504 Q6ZRX8 168 aa8.34□□□□□ -1.07
TRAPPC9-213ENST00000522504 LINC00587B1AMM8 73 aa8.33□□□□□ -1.08
TRAPPC9-213ENST00000522504 DDTP30046 118 aa8.33□□□□□ -1.08
TRAPPC9-213ENST00000522504 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
TRAPPC9-213ENST00000522504 C12orf57Q99622 126 aa8.33□□□□□ -1.08
TRAPPC9-213ENST00000522504 SLC25A34Q6PIV7 304 aa8.32□□□□□ -1.08
TRAPPC9-213ENST00000522504 LOC107984156A0A0G2JMH3 177 aa8.31□□□□□ -1.08
TRAPPC9-213ENST00000522504 DLEU1O43261 78 aa8.31□□□□□ -1.08
TRAPPC9-213ENST00000522504 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-213ENST00000522504 C9orf153Q5TBE3 101 aa8.31□□□□□ -1.08
TRAPPC9-213ENST00000522504 ARL17AQ8IVW1 177 aa8.31□□□□□ -1.08
TRAPPC9-213ENST00000522504 ST20-AS1Q8NBB2 130 aa8.31□□□□□ -1.08
TRAPPC9-213ENST00000522504 FLGP20930 4061 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-213ENST00000522504 TRBV10-2A0A0K0K1G8 114 aa8.3□□□□□ -1.08
TRAPPC9-213ENST00000522504 TIMM17BO60830 172 aa8.3□□□□□ -1.08
TRAPPC9-213ENST00000522504 IGLV8-61A0A075B6I0 122 aa8.29□□□□□ -1.08
TRAPPC9-213ENST00000522504 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
TRAPPC9-213ENST00000522504 ADAMTSL4-AS1Q5T5F5 129 aa8.29□□□□□ -1.08
TRAPPC9-213ENST00000522504 LINC00518Q8N0U6 118 aa8.29□□□□□ -1.08
TRAPPC9-213ENST00000522504 LITAFQ99732 161 aa8.29□□□□□ -1.08
TRAPPC9-213ENST00000522504 PRO1933Q9H354 126 aa8.29□□□□□ -1.08
TRAPPC9-213ENST00000522504 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC9-213ENST00000522504 NPC2P61916 151 aa8.28□□□□□ -1.08
TRAPPC9-213ENST00000522504 C9orf92A6NGG3 77 aa8.27□□□□□ -1.09
TRAPPC9-213ENST00000522504 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC9-213ENST00000522504 CFC1BP0CG36 223 aa8.27□□□□□ -1.09
TRAPPC9-213ENST00000522504 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC9-213ENST00000522504 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.09
TRAPPC9-213ENST00000522504 C2orf91Q6ZV80 131 aa8.26□□□□□ -1.09
TRAPPC9-213ENST00000522504 MIEN1Q9BRT3 115 aa8.26□□□□□ -1.09
TRAPPC9-213ENST00000522504 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
TRAPPC9-213ENST00000522504 SPANXCQ9NY87 97 aa8.26□□□□□ -1.09
TRAPPC9-213ENST00000522504 TRAV23DV6A0A075B6W5 121 aa8.25□□□□□ -1.09
TRAPPC9-213ENST00000522504 HRCT1Q6UXD1 115 aa8.25□□□□□ -1.09
TRAPPC9-213ENST00000522504 S100A7L2Q5SY68 101 aa8.24□□□□□ -1.09
TRAPPC9-213ENST00000522504 SOSTDC1Q6X4U4 206 aa8.24□□□□□ -1.09
TRAPPC9-213ENST00000522504 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
TRAPPC9-213ENST00000522504 HIGD1BQ9P298 99 aa8.24□□□□□ -1.09
TRAPPC9-213ENST00000522504 TSTD3H0UI37 97 aa8.23□□□□□ -1.09
TRAPPC9-213ENST00000522504 ZNF73O43830 326 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC9-213ENST00000522504 Q6ZVH6 145 aa8.23□□□□□ -1.09
TRAPPC9-213ENST00000522504 HIST1H4GQ99525 98 aa8.23□□□□□ -1.09
TRAPPC9-213ENST00000522504 NDUFC2O95298 119 aa8.22□□□□□ -1.09
TRAPPC9-213ENST00000522504 IFITM1P13164 125 aa8.22□□□□□ -1.09
TRAPPC9-213ENST00000522504 MUSTN1Q8IVN3 82 aa8.21□□□□□ -1.1
TRAPPC9-213ENST00000522504 COPS9Q8WXC6 57 aa8.21□□□□□ -1.1
TRAPPC9-213ENST00000522504 SPRR1BP22528 89 aa8.19□□□□□ -1.1
TRAPPC9-213ENST00000522504 HSD52Q0P140 79 aa8.18□□□□□ -1.1
TRAPPC9-213ENST00000522504 TAL2Q16559 108 aa8.18□□□□□ -1.1
TRAPPC9-213ENST00000522504 LIMD2Q9BT23 127 aa8.18□□□□□ -1.1
TRAPPC9-213ENST00000522504 CEND1Q8N111 149 aa8.15□□□□□ -1.1
TRAPPC9-213ENST00000522504 A4D1N5 150 aa8.14□□□□□ -1.11
TRAPPC9-213ENST00000522504 M0R2T5 61 aa8.14□□□□□ -1.11
TRAPPC9-213ENST00000522504 H7C2G1 150 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms