RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 DPM2O94777 84 aa11.18□□□□□ -0.62
PABPC1-217ENST00000521067 FABP4P15090 132 aa11.18□□□□□ -0.62
PABPC1-217ENST00000521067 MIEN1Q9BRT3 115 aa11.18□□□□□ -0.62
PABPC1-217ENST00000521067 NMUP48645 174 aa11.17□□□□□ -0.62
PABPC1-217ENST00000521067 NPC2P61916 151 aa11.17□□□□□ -0.62
PABPC1-217ENST00000521067 LCE2CQ5TA81 110 aa11.17□□□□□ -0.62
PABPC1-217ENST00000521067 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-217ENST00000521067 C9orf153Q5TBE3 101 aa11.17□□□□□ -0.62
PABPC1-217ENST00000521067 ZNF73O43830 326 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-217ENST00000521067 LGALS3P17931 250 aaKnown RBP11.16□□□□□ -0.62
PABPC1-217ENST00000521067 IGKCP01834 107 aa11.15□□□□□ -0.62
PABPC1-217ENST00000521067 HERVK_113P61574 105 aa11.15□□□□□ -0.62
PABPC1-217ENST00000521067 JOSD1Q15040 202 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-217ENST00000521067 FSIP2Q5CZC0 6907 aa11.14□□□□□ -0.63
PABPC1-217ENST00000521067 A0A0J9YXY3 114 aa11.14□□□□□ -0.63
PABPC1-217ENST00000521067 HSPB8Q9UJY1 196 aa11.14□□□□□ -0.63
PABPC1-217ENST00000521067 KRTAP19-2Q3LHN2 52 aa11.12□□□□□ -0.63
PABPC1-217ENST00000521067 C5orf52A6NGY3 159 aa11.08□□□□□ -0.64
PABPC1-217ENST00000521067 E9PLD3 99 aa11.08□□□□□ -0.64
PABPC1-217ENST00000521067 SPRR1BP22528 89 aa11.08□□□□□ -0.64
PABPC1-217ENST00000521067 LITAFQ99732 161 aa11.08□□□□□ -0.64
PABPC1-217ENST00000521067 HRCT1Q6UXD1 115 aa11.07□□□□□ -0.64
PABPC1-217ENST00000521067 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
PABPC1-217ENST00000521067 PCOTHQ58A44 107 aa11.04□□□□□ -0.64
PABPC1-217ENST00000521067 COLCA2A8K830 154 aa11.03□□□□□ -0.64
PABPC1-217ENST00000521067 HINT1P49773 126 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-217ENST00000521067 C9orf92A6NGG3 77 aa11.02□□□□□ -0.65
PABPC1-217ENST00000521067 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.65
PABPC1-217ENST00000521067 SPANXCQ9NY87 97 aa11.02□□□□□ -0.65
PABPC1-217ENST00000521067 MT1HP80294 61 aa11.01□□□□□ -0.65
PABPC1-217ENST00000521067 CRCT1Q9UGL9 99 aa11.01□□□□□ -0.65
PABPC1-217ENST00000521067 DHRS4-AS1Q9P1J3 65 aa11□□□□□ -0.65
PABPC1-217ENST00000521067 LIMD2Q9BT23 127 aa10.99□□□□□ -0.65
PABPC1-217ENST00000521067 CBY1Q9Y3M2 126 aa10.99□□□□□ -0.65
PABPC1-217ENST00000521067 IGLV8-61A0A075B6I0 122 aa10.98□□□□□ -0.65
PABPC1-217ENST00000521067 SYS1-DBNDD2H3BUS1 97 aa10.98□□□□□ -0.65
PABPC1-217ENST00000521067 TIMM17BO60830 172 aa10.98□□□□□ -0.65
PABPC1-217ENST00000521067 TTTY13Q9BZ97 58 aa10.98□□□□□ -0.65
PABPC1-217ENST00000521067 LAMTOR3Q9UHA4 124 aa10.98□□□□□ -0.65
PABPC1-217ENST00000521067 SLC25A34Q6PIV7 304 aa10.97□□□□□ -0.65
PABPC1-217ENST00000521067 ELOF1P60002 83 aaKnown RBP10.96□□□□□ -0.65
PABPC1-217ENST00000521067 SPANXDQ9BXN6 97 aa10.96□□□□□ -0.65
PABPC1-217ENST00000521067 COX7BP24311 80 aa10.95□□□□□ -0.66
PABPC1-217ENST00000521067 Q1RN00 199 aa10.95□□□□□ -0.66
PABPC1-217ENST00000521067 C6orf99Q4VX62 202 aa10.95□□□□□ -0.66
PABPC1-217ENST00000521067 DEFB105AQ8NG35 78 aa10.95□□□□□ -0.66
PABPC1-217ENST00000521067 TAL2Q16559 108 aa10.93□□□□□ -0.66
PABPC1-217ENST00000521067 LINC01545Q5VT33 79 aa10.93□□□□□ -0.66
PABPC1-217ENST00000521067 SLC7A5P1Q8MH63 180 aa10.93□□□□□ -0.66
PABPC1-217ENST00000521067 ZNF815PA8K554 130 aa10.92□□□□□ -0.66
PABPC1-217ENST00000521067 H7C2G1 150 aa10.92□□□□□ -0.66
PABPC1-217ENST00000521067 SMIM29Q86T20 159 aa10.92□□□□□ -0.66
PABPC1-217ENST00000521067 CD164Q04900 197 aa10.91□□□□□ -0.66
PABPC1-217ENST00000521067 A0A0G2JQZ4 141 aa10.9□□□□□ -0.66
PABPC1-217ENST00000521067 LINC00518Q8N0U6 118 aa10.9□□□□□ -0.66
PABPC1-217ENST00000521067 PRO1933Q9H354 126 aa10.9□□□□□ -0.66
PABPC1-217ENST00000521067 TEX49A0A1B0GTD5 131 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BKO60814 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BJP06899 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BOP23527 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BBP33778 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BDP58876 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BCP62807 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST2H2BEQ16778 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BHQ93079 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BNQ99877 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 HIST1H2BMQ99879 126 aa10.89□□□□□ -0.67
PABPC1-217ENST00000521067 FLGP20930 4061 aaPredicted RBP10.88□□□□□ -0.67
PABPC1-217ENST00000521067 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
PABPC1-217ENST00000521067 Q5XG85 94 aa10.87□□□□□ -0.67
PABPC1-217ENST00000521067 PET117Q6UWS5 81 aa10.87□□□□□ -0.67
PABPC1-217ENST00000521067 LORP23490 312 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-217ENST00000521067 TRBV7-6A0A0J9YX20 115 aa10.84□□□□□ -0.67
PABPC1-217ENST00000521067 AKR1D1P51857 326 aa10.84□□□□□ -0.67
PABPC1-217ENST00000521067 IGLV5-48A0A075B6I7 105 aa10.83□□□□□ -0.68
PABPC1-217ENST00000521067 C3orf79P0CE67 100 aa10.83□□□□□ -0.68
PABPC1-217ENST00000521067 CFC1BP0CG36 223 aa10.83□□□□□ -0.68
PABPC1-217ENST00000521067 KRTAP10-6P60371 365 aaPredicted RBP10.83□□□□□ -0.68
PABPC1-217ENST00000521067 A0A1B0GWB2 263 aa10.8□□□□□ -0.68
PABPC1-217ENST00000521067 RPL37P61927 97 aaKnown RBP10.79□□□□□ -0.68
PABPC1-217ENST00000521067 A6NDN8 102 aa10.78□□□□□ -0.68
PABPC1-217ENST00000521067 ANKRD39Q53RE8 183 aa10.78□□□□□ -0.68
PABPC1-217ENST00000521067 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
PABPC1-217ENST00000521067 MUSTN1Q8IVN3 82 aa10.76□□□□□ -0.69
PABPC1-217ENST00000521067 IFITM1P13164 125 aa10.75□□□□□ -0.69
PABPC1-217ENST00000521067 KRTDAPP60985 99 aa10.75□□□□□ -0.69
PABPC1-217ENST00000521067 PCP2Q8IVA1 136 aa10.73□□□□□ -0.69
PABPC1-217ENST00000521067 SMIM11BQ8TCY0 68 aa10.72□□□□□ -0.69
PABPC1-217ENST00000521067 COA6Q5JTJ3 125 aaKnown RBP10.71□□□□□ -0.69
PABPC1-217ENST00000521067 ATOH7Q8N100 152 aa10.71□□□□□ -0.69
PABPC1-217ENST00000521067 A4D1N5 150 aa10.7□□□□□ -0.7
PABPC1-217ENST00000521067 M0R2T5 61 aa10.7□□□□□ -0.7
PABPC1-217ENST00000521067 Q6ZVH6 145 aa10.7□□□□□ -0.7
PABPC1-217ENST00000521067 COPS9Q8WXC6 57 aa10.7□□□□□ -0.7
PABPC1-217ENST00000521067 COX6B2Q6YFQ2 88 aa10.67□□□□□ -0.7
PABPC1-217ENST00000521067 TRAV13-2A0A0B4J235 113 aa10.66□□□□□ -0.7
PABPC1-217ENST00000521067 TCL1BO95988 128 aa10.66□□□□□ -0.7
PABPC1-217ENST00000521067 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
PABPC1-217ENST00000521067 C20orf202A1L168 122 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms