RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 LCE2DQ5TA82 110 aaPredicted RBP5.45□□□□□ -1.54
HMGB4-203ENST00000519684 LINC00846Q9NV44 126 aa5.45□□□□□ -1.54
HMGB4-203ENST00000519684 LOC110117498A0A087WWA1 95 aa5.44□□□□□ -1.54
HMGB4-203ENST00000519684 RPL37AP8A6NKH3 93 aa5.44□□□□□ -1.54
HMGB4-203ENST00000519684 NDUFV3P56181 108 aaKnown RBP5.44□□□□□ -1.54
HMGB4-203ENST00000519684 CNBPP62633 177 aaKnown RBP5.44□□□□□ -1.54
HMGB4-203ENST00000519684 V9GYY9 64 aa5.44□□□□□ -1.54
HMGB4-203ENST00000519684 ETDCA0A1B0GVM5 59 aa5.43□□□□□ -1.54
HMGB4-203ENST00000519684 PDE6GP18545 87 aa5.43□□□□□ -1.54
HMGB4-203ENST00000519684 MRPL55Q7Z7F7 128 aaKnown RBP5.43□□□□□ -1.54
HMGB4-203ENST00000519684 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
HMGB4-203ENST00000519684 Q6JHZ5 121 aa5.43□□□□□ -1.54
HMGB4-203ENST00000519684 Q6ZQT0 140 aa5.43□□□□□ -1.54
HMGB4-203ENST00000519684 NBDYA0A0U1RRE5 68 aa5.42□□□□□ -1.54
HMGB4-203ENST00000519684 DHRS4-AS1Q9P1J3 65 aa5.42□□□□□ -1.54
HMGB4-203ENST00000519684 PKIGQ9Y2B9 76 aa5.42□□□□□ -1.54
HMGB4-203ENST00000519684 COL7A1Q02388 2944 aa5.42□□□□□ -1.54
HMGB4-203ENST00000519684 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.41□□□□□ -1.54
HMGB4-203ENST00000519684 C16orf90A8MZG2 172 aa5.41□□□□□ -1.54
HMGB4-203ENST00000519684 Q6ZRX8 168 aa5.41□□□□□ -1.54
HMGB4-203ENST00000519684 UBL5Q9BZL1 73 aa5.41□□□□□ -1.54
HMGB4-203ENST00000519684 IGKV2-24A0A0C4DH68 120 aa5.41□□□□□ -1.54
HMGB4-203ENST00000519684 A0A096LNI7 61 aa5.4□□□□□ -1.54
HMGB4-203ENST00000519684 IGKV3D-7A0A0C4DH55 119 aa5.4□□□□□ -1.54
HMGB4-203ENST00000519684 FAM236AA0A1B0GUQ0 79 aa5.4□□□□□ -1.54
HMGB4-203ENST00000519684 FAM236BA0A1B0GV22 79 aa5.4□□□□□ -1.54
HMGB4-203ENST00000519684 B5MCH6 92 aa5.4□□□□□ -1.54
HMGB4-203ENST00000519684 KRTAP7-1Q8IUC3 87 aa5.4□□□□□ -1.54
HMGB4-203ENST00000519684 SPRR1AP35321 89 aa5.4□□□□□ -1.55
HMGB4-203ENST00000519684 ATP5EP2Q5VTU8 51 aa5.4□□□□□ -1.55
HMGB4-203ENST00000519684 REG3GQ6UW15 175 aa5.39□□□□□ -1.55
HMGB4-203ENST00000519684 DEFB105AQ8NG35 78 aa5.39□□□□□ -1.55
HMGB4-203ENST00000519684 DNAH9Q9NYC9 4486 aa5.39□□□□□ -1.55
HMGB4-203ENST00000519684 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
HMGB4-203ENST00000519684 TRBV7-4A0A0J9YYF1 115 aa5.39□□□□□ -1.55
HMGB4-203ENST00000519684 KRTAP4-16G5E9R7 235 aaPredicted RBP5.39□□□□□ -1.55
HMGB4-203ENST00000519684 UBE2BP63146 152 aa5.38□□□□□ -1.55
HMGB4-203ENST00000519684 LRCOL1A6NCL2 159 aa5.37□□□□□ -1.55
HMGB4-203ENST00000519684 Q9BRP9 147 aa5.37□□□□□ -1.55
HMGB4-203ENST00000519684 STAB2Q8WWQ8 2551 aa5.37□□□□□ -1.55
HMGB4-203ENST00000519684 A0A1W2PNN7 141 aa5.36□□□□□ -1.55
HMGB4-203ENST00000519684 M0R2N4 97 aa5.36□□□□□ -1.55
HMGB4-203ENST00000519684 Q8N377 158 aa5.36□□□□□ -1.55
HMGB4-203ENST00000519684 C9orf163Q8N9P6 203 aa5.36□□□□□ -1.55
HMGB4-203ENST00000519684 HIST1H4AP62805 103 aaKnown RBP5.35□□□□□ -1.55
HMGB4-203ENST00000519684 Q6ZRN7 208 aaPredicted RBP5.35□□□□□ -1.55
HMGB4-203ENST00000519684 LINC00474Q9P2X8 69 aa5.35□□□□□ -1.55
HMGB4-203ENST00000519684 DYNC2H1Q8NCM8 4307 aaKnown RBP5.35□□□□□ -1.55
HMGB4-203ENST00000519684 CHTF8P0CG12 524 aa5.34□□□□□ -1.55
HMGB4-203ENST00000519684 LINC01547P58512 204 aaPredicted RBP5.34□□□□□ -1.55
HMGB4-203ENST00000519684 Q6ZVQ6 151 aa5.34□□□□□ -1.55
HMGB4-203ENST00000519684 FAM19A1Q7Z5A9 133 aa5.34□□□□□ -1.55
HMGB4-203ENST00000519684 IGLV5-48A0A075B6I7 105 aa5.34□□□□□ -1.56
HMGB4-203ENST00000519684 ATOX1O00244 68 aa5.34□□□□□ -1.56
HMGB4-203ENST00000519684 HAMPP81172 84 aa5.34□□□□□ -1.56
HMGB4-203ENST00000519684 ST20-AS1Q8NBB2 130 aa5.34□□□□□ -1.56
HMGB4-203ENST00000519684 ERC2-IT1O76042 136 aa5.32□□□□□ -1.56
HMGB4-203ENST00000519684 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
HMGB4-203ENST00000519684 A0A087WVE0 104 aa5.32□□□□□ -1.56
HMGB4-203ENST00000519684 PHF5AQ7RTV0 110 aaKnown RBP5.32□□□□□ -1.56
HMGB4-203ENST00000519684 DPH3Q96FX2 82 aa5.32□□□□□ -1.56
HMGB4-203ENST00000519684 F8WEM9 126 aa5.31□□□□□ -1.56
HMGB4-203ENST00000519684 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
HMGB4-203ENST00000519684 PRLHP81277 87 aa5.31□□□□□ -1.56
HMGB4-203ENST00000519684 C3orf22Q8N5N4 141 aa5.31□□□□□ -1.56
HMGB4-203ENST00000519684 FUSP35637 526 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB4-203ENST00000519684 CXCL6P80162 114 aa5.31□□□□□ -1.56
HMGB4-203ENST00000519684 A0A087WTM6 91 aa5.3□□□□□ -1.56
HMGB4-203ENST00000519684 HIGD2AQ9BW72 106 aa5.3□□□□□ -1.56
HMGB4-203ENST00000519684 LYSTQ99698 3801 aa5.3□□□□□ -1.56
HMGB4-203ENST00000519684 C1orf137Q5JT78 98 aa5.3□□□□□ -1.56
HMGB4-203ENST00000519684 NREPQ16612 68 aa5.29□□□□□ -1.56
HMGB4-203ENST00000519684 CSMD3Q7Z407 3707 aa5.29□□□□□ -1.56
HMGB4-203ENST00000519684 A0A1B0GW54 56 aa5.29□□□□□ -1.56
HMGB4-203ENST00000519684 UBE2AP49459 152 aa5.29□□□□□ -1.56
HMGB4-203ENST00000519684 TNP2Q05952 138 aa5.29□□□□□ -1.56
HMGB4-203ENST00000519684 Q6ZR54 194 aa5.29□□□□□ -1.56
HMGB4-203ENST00000519684 H0Y9J4 135 aa5.28□□□□□ -1.56
HMGB4-203ENST00000519684 C3orf84H3BNL1 204 aa5.28□□□□□ -1.56
HMGB4-203ENST00000519684 LINC00336Q6ZUF6 198 aa5.28□□□□□ -1.56
HMGB4-203ENST00000519684 UQCRQO14949 82 aa5.28□□□□□ -1.56
HMGB4-203ENST00000519684 C1orf134Q5TEV5 83 aa5.28□□□□□ -1.56
HMGB4-203ENST00000519684 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
HMGB4-203ENST00000519684 EPM2AB3EWF7 344 aa5.27□□□□□ -1.57
HMGB4-203ENST00000519684 H3BS24 57 aa5.27□□□□□ -1.57
HMGB4-203ENST00000519684 RTL8CO15255 209 aa5.27□□□□□ -1.57
HMGB4-203ENST00000519684 LY6G6CO95867 125 aa5.27□□□□□ -1.57
HMGB4-203ENST00000519684 COX7CP15954 63 aa5.27□□□□□ -1.57
HMGB4-203ENST00000519684 DNAH10Q8IVF4 4471 aa5.27□□□□□ -1.57
HMGB4-203ENST00000519684 OXTP01178 125 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 SCXQ7RTU7 201 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 KRTAP11-1Q8IUC1 163 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 Q8NBF4 154 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 MEGF8Q7Z7M0 2845 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 DNAH7Q8WXX0 4024 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 PANO1I0J062 215 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 BCE1O60756 84 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 KRTAP21-3Q3LHN1 58 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 C9orf153Q5TBE3 101 aa5.26□□□□□ -1.57
HMGB4-203ENST00000519684 SMIM29Q86T20 159 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms