RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 VCX2Q9H322 139 aa2.85□□□□□ -1.95
CTNNA1-216ENST00000519489 NDUFA13Q9P0J0 144 aa2.85□□□□□ -1.95
CTNNA1-216ENST00000519489 ERG28Q9UKR5 140 aa2.85□□□□□ -1.95
CTNNA1-216ENST00000519489 TRBV24-1A0A075B6N3 115 aa2.84□□□□□ -1.95
CTNNA1-216ENST00000519489 A0A1B0GUT8 65 aa2.84□□□□□ -1.95
CTNNA1-216ENST00000519489 GATCO43716 136 aaKnown RBP2.84□□□□□ -1.95
CTNNA1-216ENST00000519489 ATP5LO75964 103 aa2.84□□□□□ -1.95
CTNNA1-216ENST00000519489 SPINK8P0C7L1 97 aa2.84□□□□□ -1.95
CTNNA1-216ENST00000519489 MRPL51Q4U2R6 128 aaKnown RBP2.84□□□□□ -1.95
CTNNA1-216ENST00000519489 C20orf78Q9BR46 151 aa2.84□□□□□ -1.95
CTNNA1-216ENST00000519489 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
CTNNA1-216ENST00000519489 FAM213BQ8TBF2 198 aa2.83□□□□□ -1.96
CTNNA1-216ENST00000519489 GNG13Q9P2W3 67 aa2.83□□□□□ -1.96
CTNNA1-216ENST00000519489 CKS2P33552 79 aa2.82□□□□□ -1.96
CTNNA1-216ENST00000519489 MT1XP80297 61 aa2.82□□□□□ -1.96
CTNNA1-216ENST00000519489 ENKURQ8TC29 256 aa2.82□□□□□ -1.96
CTNNA1-216ENST00000519489 ZCCHC13Q8WW36 166 aaKnown RBP2.82□□□□□ -1.96
CTNNA1-216ENST00000519489 IMUPQ9GZP8 106 aa2.82□□□□□ -1.96
CTNNA1-216ENST00000519489 PRO1933Q9H354 126 aa2.82□□□□□ -1.96
CTNNA1-216ENST00000519489 IGLV5-45A0A087WSX0 123 aa2.81□□□□□ -1.96
CTNNA1-216ENST00000519489 IGIPA6NJ69 53 aa2.81□□□□□ -1.96
CTNNA1-216ENST00000519489 HIGD1CA8MV81 97 aa2.81□□□□□ -1.96
CTNNA1-216ENST00000519489 D6R8Y8 96 aa2.81□□□□□ -1.96
CTNNA1-216ENST00000519489 NPYP01303 97 aa2.81□□□□□ -1.96
CTNNA1-216ENST00000519489 SEC11AP67812 179 aa2.81□□□□□ -1.96
CTNNA1-216ENST00000519489 OCC1Q8TAD7 63 aa2.81□□□□□ -1.96
CTNNA1-216ENST00000519489 MBD3L1Q8WWY6 194 aa2.81□□□□□ -1.96
CTNNA1-216ENST00000519489 A0A1W2PNM2 257 aa2.8□□□□□ -1.96
CTNNA1-216ENST00000519489 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
CTNNA1-216ENST00000519489 LITAFQ99732 161 aa2.8□□□□□ -1.96
CTNNA1-216ENST00000519489 MANBALQ9NQG1 85 aa2.8□□□□□ -1.96
CTNNA1-216ENST00000519489 LINC00862A6NCI5 91 aa2.79□□□□□ -1.96
CTNNA1-216ENST00000519489 S100A12P80511 92 aa2.79□□□□□ -1.96
CTNNA1-216ENST00000519489 RIGQ13278 110 aa2.79□□□□□ -1.96
CTNNA1-216ENST00000519489 Q5BKY6 102 aa2.79□□□□□ -1.96
CTNNA1-216ENST00000519489 FAM104BQ5XKR9 115 aa2.79□□□□□ -1.96
CTNNA1-216ENST00000519489 A0A0U1RRA0 63 aa2.78□□□□□ -1.96
CTNNA1-216ENST00000519489 PAPPA-AS1Q5QFB9 102 aa2.78□□□□□ -1.96
CTNNA1-216ENST00000519489 BOD1L2Q8IYS8 172 aa2.78□□□□□ -1.96
CTNNA1-216ENST00000519489 LAMTOR3Q9UHA4 124 aa2.78□□□□□ -1.96
CTNNA1-216ENST00000519489 CYSLTR1Q9Y271 337 aa2.78□□□□□ -1.96
CTNNA1-216ENST00000519489 PDE6DO43924 150 aa2.77□□□□□ -1.97
CTNNA1-216ENST00000519489 AKR1D1P51857 326 aa2.77□□□□□ -1.97
CTNNA1-216ENST00000519489 LINC00158P58513 81 aa2.77□□□□□ -1.97
CTNNA1-216ENST00000519489 COX17Q14061 63 aa2.77□□□□□ -1.97
CTNNA1-216ENST00000519489 SLC25A34Q6PIV7 304 aa2.77□□□□□ -1.97
CTNNA1-216ENST00000519489 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
CTNNA1-216ENST00000519489 TCL1BO95988 128 aa2.76□□□□□ -1.97
CTNNA1-216ENST00000519489 MTURNQ8N3F0 131 aa2.76□□□□□ -1.97
CTNNA1-216ENST00000519489 FAM218AQ96MZ4 157 aa2.76□□□□□ -1.97
CTNNA1-216ENST00000519489 TINCRA0A1B0GVN0 87 aa2.75□□□□□ -1.97
CTNNA1-216ENST00000519489 C5orf52A6NGY3 159 aa2.75□□□□□ -1.97
CTNNA1-216ENST00000519489 RBM3P98179 157 aaKnown RBP2.75□□□□□ -1.97
CTNNA1-216ENST00000519489 JOSD1Q15040 202 aaPredicted RBP2.75□□□□□ -1.97
CTNNA1-216ENST00000519489 PMVKQ15126 192 aa2.75□□□□□ -1.97
CTNNA1-216ENST00000519489 HMSDA8MTL9 139 aa2.74□□□□□ -1.97
CTNNA1-216ENST00000519489 UMAD1C9J7I0 102 aa2.74□□□□□ -1.97
CTNNA1-216ENST00000519489 DDTP30046 118 aa2.74□□□□□ -1.97
CTNNA1-216ENST00000519489 ATP6V1G1O75348 118 aa2.73□□□□□ -1.97
CTNNA1-216ENST00000519489 NDUFA6P56556 154 aa2.73□□□□□ -1.97
CTNNA1-216ENST00000519489 DSCR10P59022 87 aa2.73□□□□□ -1.97
CTNNA1-216ENST00000519489 H3BRM9 83 aa2.72□□□□□ -1.97
CTNNA1-216ENST00000519489 ADCYAP1P18509 176 aa2.72□□□□□ -1.97
CTNNA1-216ENST00000519489 RPL23P62829 140 aaKnown RBP2.72□□□□□ -1.97
CTNNA1-216ENST00000519489 DEFB105AQ8NG35 78 aa2.72□□□□□ -1.97
CTNNA1-216ENST00000519489 PRELID3AQ96N28 172 aa2.72□□□□□ -1.97
CTNNA1-216ENST00000519489 TEX46H3BTG2 121 aa2.71□□□□□ -1.98
CTNNA1-216ENST00000519489 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
CTNNA1-216ENST00000519489 F8W036 122 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 ARPC5O15511 151 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 PPBPP02775 128 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 SMIM13P0DJ93 91 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 CEBPGP53567 150 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 TAL2Q16559 108 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 ORMDL2Q53FV1 153 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 TMEM136Q6ZRR5 245 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 ORMDL3Q8N138 153 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 MAP1LC3AQ9H492 121 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 BATF3Q9NR55 127 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 NAT8BQ9UHF3 227 aa2.7□□□□□ -1.98
CTNNA1-216ENST00000519489 ZNF73O43830 326 aaPredicted RBP2.69□□□□□ -1.98
CTNNA1-216ENST00000519489 SPINK7P58062 85 aa2.69□□□□□ -1.98
CTNNA1-216ENST00000519489 MRPL54Q6P161 138 aaKnown RBP2.69□□□□□ -1.98
CTNNA1-216ENST00000519489 MIR7-3HGQ8N6C7 128 aa2.69□□□□□ -1.98
CTNNA1-216ENST00000519489 TRAV23DV6A0A075B6W5 121 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 FAM74A3Q4VXF1 159 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 S100A7L2Q5SY68 101 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 WFDC13Q8IUB5 93 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 Q8N8P6 123 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 SCGB3A1Q96QR1 104 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 CST9LQ9H4G1 147 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 OSTCQ9NRP0 149 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 V9GYV3 84 aa2.68□□□□□ -1.98
CTNNA1-216ENST00000519489 TRBV7-7A0A0K0K1E9 115 aa2.67□□□□□ -1.98
CTNNA1-216ENST00000519489 FAM236AA0A1B0GUQ0 79 aa2.67□□□□□ -1.98
CTNNA1-216ENST00000519489 FAM236BA0A1B0GV22 79 aa2.67□□□□□ -1.98
CTNNA1-216ENST00000519489 A0A1B0GW15 77 aa2.67□□□□□ -1.98
CTNNA1-216ENST00000519489 HINT1P49773 126 aaPredicted RBP2.67□□□□□ -1.98
CTNNA1-216ENST00000519489 ZNF345Q14585 488 aa2.67□□□□□ -1.98
CTNNA1-216ENST00000519489 MEIG1Q5JSS6 88 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms