RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 BAALC-AS2P0C853 105 aa6.03□□□□□ -1.44
TPM3-222ENST00000515609 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
TPM3-222ENST00000515609 TEN1Q86WV5 123 aa6.03□□□□□ -1.44
TPM3-222ENST00000515609 DYNC2H1Q8NCM8 4307 aaKnown RBP6.02□□□□□ -1.45
TPM3-222ENST00000515609 RPL37AP8A6NKH3 93 aa6.02□□□□□ -1.45
TPM3-222ENST00000515609 SPRR1AP35321 89 aa6.02□□□□□ -1.45
TPM3-222ENST00000515609 Q6ZRX8 168 aa6.02□□□□□ -1.45
TPM3-222ENST00000515609 PPDPFLQ8WWR9 84 aa6.02□□□□□ -1.45
TPM3-222ENST00000515609 PRO0461Q9UI25 63 aa6.02□□□□□ -1.45
TPM3-222ENST00000515609 A0A087WYN8 130 aa6.01□□□□□ -1.45
TPM3-222ENST00000515609 A0A1W2PNN7 141 aa6.01□□□□□ -1.45
TPM3-222ENST00000515609 EPM2AB3EWF7 344 aa6.01□□□□□ -1.45
TPM3-222ENST00000515609 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
TPM3-222ENST00000515609 LINC00528Q8N1L1 170 aa6.01□□□□□ -1.45
TPM3-222ENST00000515609 PLAC8Q9NZF1 115 aa6.01□□□□□ -1.45
TPM3-222ENST00000515609 JMJD7-PLA2G4BH0Y9G9 81 aa6□□□□□ -1.45
TPM3-222ENST00000515609 H0Y9J4 135 aa6□□□□□ -1.45
TPM3-222ENST00000515609 ETDBQ3ZM63 59 aa6□□□□□ -1.45
TPM3-222ENST00000515609 FAM218AQ96MZ4 157 aa6□□□□□ -1.45
TPM3-222ENST00000515609 CSMD3Q7Z407 3707 aa6□□□□□ -1.45
TPM3-222ENST00000515609 B5MCH6 92 aa5.98□□□□□ -1.45
TPM3-222ENST00000515609 KRTAP7-1Q8IUC3 87 aa5.98□□□□□ -1.45
TPM3-222ENST00000515609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.98□□□□□ -1.45
TPM3-222ENST00000515609 DNAH7Q8WXX0 4024 aa5.97□□□□□ -1.45
TPM3-222ENST00000515609 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
TPM3-222ENST00000515609 UBE2AP49459 152 aa5.97□□□□□ -1.45
TPM3-222ENST00000515609 SMCPP49901 116 aaPredicted RBP5.97□□□□□ -1.45
TPM3-222ENST00000515609 Q6ZQY7 126 aa5.97□□□□□ -1.45
TPM3-222ENST00000515609 PHF5AQ7RTV0 110 aaKnown RBP5.97□□□□□ -1.45
TPM3-222ENST00000515609 FAM19A1Q7Z5A9 133 aa5.97□□□□□ -1.45
TPM3-222ENST00000515609 MTURNQ8N3F0 131 aa5.97□□□□□ -1.45
TPM3-222ENST00000515609 BCE1O60756 84 aa5.96□□□□□ -1.46
TPM3-222ENST00000515609 PDE6GP18545 87 aa5.96□□□□□ -1.46
TPM3-222ENST00000515609 LAMTOR3Q9UHA4 124 aa5.95□□□□□ -1.46
TPM3-222ENST00000515609 KRTAP10-2P60368 255 aa5.94□□□□□ -1.46
TPM3-222ENST00000515609 ZNF706Q9Y5V0 76 aaPredicted RBP5.94□□□□□ -1.46
TPM3-222ENST00000515609 ACYP1P07311 99 aa5.93□□□□□ -1.46
TPM3-222ENST00000515609 Q6ZSA8 131 aa5.93□□□□□ -1.46
TPM3-222ENST00000515609 STARD9Q9P2P6 4700 aa5.92□□□□□ -1.46
TPM3-222ENST00000515609 TEX49A0A1B0GTD5 131 aa5.92□□□□□ -1.46
TPM3-222ENST00000515609 PANO1I0J062 215 aa5.92□□□□□ -1.46
TPM3-222ENST00000515609 RBM3P98179 157 aaKnown RBP5.92□□□□□ -1.46
TPM3-222ENST00000515609 DSCR8Q96T75 97 aa5.92□□□□□ -1.46
TPM3-222ENST00000515609 HIGD2AQ9BW72 106 aa5.92□□□□□ -1.46
TPM3-222ENST00000515609 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
TPM3-222ENST00000515609 IGLV5-48A0A075B6I7 105 aa5.91□□□□□ -1.46
TPM3-222ENST00000515609 F8WEM9 126 aa5.91□□□□□ -1.46
TPM3-222ENST00000515609 NDUFV3P56181 108 aaKnown RBP5.91□□□□□ -1.46
TPM3-222ENST00000515609 Q9BRP9 147 aa5.91□□□□□ -1.46
TPM3-222ENST00000515609 FAM240AA0A1B0GVK7 77 aa5.9□□□□□ -1.46
TPM3-222ENST00000515609 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.46
TPM3-222ENST00000515609 SMCR5Q8TEV8 140 aa5.9□□□□□ -1.46
TPM3-222ENST00000515609 OBSCN-AS1Q96MR7 158 aa5.9□□□□□ -1.46
TPM3-222ENST00000515609 PLECQ15149 4684 aaKnown RBP5.9□□□□□ -1.47
TPM3-222ENST00000515609 DNAH1Q9P2D7 4330 aa5.9□□□□□ -1.47
TPM3-222ENST00000515609 PRLHP81277 87 aa5.89□□□□□ -1.47
TPM3-222ENST00000515609 PSORS1C2Q9UIG4 136 aa5.89□□□□□ -1.47
TPM3-222ENST00000515609 ALMS1Q8TCU4 4167 aa5.88□□□□□ -1.47
TPM3-222ENST00000515609 A0A1B0GW54 56 aa5.88□□□□□ -1.47
TPM3-222ENST00000515609 ZNF861PO60384 105 aa5.88□□□□□ -1.47
TPM3-222ENST00000515609 FUSP35637 526 aaKnown RBP eCLIP5.88□□□□□ -1.47
TPM3-222ENST00000515609 KRTAP10-1P60331 282 aa5.88□□□□□ -1.47
TPM3-222ENST00000515609 C1orf137Q5JT78 98 aa5.88□□□□□ -1.47
TPM3-222ENST00000515609 SCXQ7RTU7 201 aa5.88□□□□□ -1.47
TPM3-222ENST00000515609 DEFB105AQ8NG35 78 aa5.88□□□□□ -1.47
TPM3-222ENST00000515609 LOC110117498A0A087WWA1 95 aa5.87□□□□□ -1.47
TPM3-222ENST00000515609 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
TPM3-222ENST00000515609 CCKP06307 115 aa5.86□□□□□ -1.47
TPM3-222ENST00000515609 SPRR1BP22528 89 aa5.86□□□□□ -1.47
TPM3-222ENST00000515609 KRTAP13-1Q8IUC0 172 aa5.86□□□□□ -1.47
TPM3-222ENST00000515609 Q8N377 158 aa5.86□□□□□ -1.47
TPM3-222ENST00000515609 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
TPM3-222ENST00000515609 IGLV7-43P04211 117 aa5.85□□□□□ -1.47
TPM3-222ENST00000515609 GAGE2AQ6NT46 116 aa5.85□□□□□ -1.47
TPM3-222ENST00000515609 VPS25Q9BRG1 176 aa5.85□□□□□ -1.47
TPM3-222ENST00000515609 FAM30AQ9NZY2 134 aa5.85□□□□□ -1.47
TPM3-222ENST00000515609 LYSTQ99698 3801 aa5.84□□□□□ -1.47
TPM3-222ENST00000515609 ERC2-IT1O76042 136 aa5.84□□□□□ -1.47
TPM3-222ENST00000515609 Q6JHZ5 121 aa5.84□□□□□ -1.47
TPM3-222ENST00000515609 KRTAP11-1Q8IUC1 163 aa5.84□□□□□ -1.47
TPM3-222ENST00000515609 RPL37AP61513 92 aaKnown RBP5.83□□□□□ -1.48
TPM3-222ENST00000515609 DNAH6Q9C0G6 4158 aa5.82□□□□□ -1.48
TPM3-222ENST00000515609 TRBV7-4A0A0J9YYF1 115 aa5.82□□□□□ -1.48
TPM3-222ENST00000515609 LINC01547P58512 204 aaPredicted RBP5.82□□□□□ -1.48
TPM3-222ENST00000515609 ST20-AS1Q8NBB2 130 aa5.82□□□□□ -1.48
TPM3-222ENST00000515609 Q6ZQT0 140 aa5.81□□□□□ -1.48
TPM3-222ENST00000515609 UBL5Q9BZL1 73 aa5.81□□□□□ -1.48
TPM3-222ENST00000515609 IGLV8-61A0A075B6I0 122 aa5.8□□□□□ -1.48
TPM3-222ENST00000515609 LINC00483Q53H64 154 aa5.8□□□□□ -1.48
TPM3-222ENST00000515609 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
TPM3-222ENST00000515609 A0A1B0GV72 72 aa5.79□□□□□ -1.48
TPM3-222ENST00000515609 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
TPM3-222ENST00000515609 SPINK6Q6UWN8 80 aa5.77□□□□□ -1.49
TPM3-222ENST00000515609 SMIM29Q86T20 159 aa5.77□□□□□ -1.49
TPM3-222ENST00000515609 KMT2AQ03164 3969 aa5.76□□□□□ -1.49
TPM3-222ENST00000515609 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
TPM3-222ENST00000515609 CDK2AP2O75956 126 aa5.76□□□□□ -1.49
TPM3-222ENST00000515609 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
TPM3-222ENST00000515609 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
TPM3-222ENST00000515609 ATP5EP2Q5VTU8 51 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms