RNA–Protein interactions for RNA: ENST00000515011.5

PDE4D-223, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-223ENST00000515011 LINC00846Q9NV44 126 aa14.69□□□□□ -0.06
PDE4D-223ENST00000515011 RBM3P98179 157 aaKnown RBP14.68□□□□□ -0.06
PDE4D-223ENST00000515011 IGLV1-50A0A075B6I6 118 aa14.68□□□□□ -0.06
PDE4D-223ENST00000515011 PRYO14603 147 aa14.68□□□□□ -0.06
PDE4D-223ENST00000515011 C14orf177Q52M58 125 aa14.67□□□□□ -0.06
PDE4D-223ENST00000515011 NBDYA0A0U1RRE5 68 aa14.67□□□□□ -0.06
PDE4D-223ENST00000515011 IMUPQ9GZP8 106 aa14.67□□□□□ -0.06
PDE4D-223ENST00000515011 LOC110117498A0A087WWA1 95 aa14.66□□□□□ -0.06
PDE4D-223ENST00000515011 FAM19A5Q7Z5A7 132 aaPredicted RBP14.66□□□□□ -0.06
PDE4D-223ENST00000515011 RPL37AP8A6NKH3 93 aa14.65□□□□□ -0.06
PDE4D-223ENST00000515011 CSMD3Q7Z407 3707 aa14.65□□□□□ -0.06
PDE4D-223ENST00000515011 SPRR1AP35321 89 aa14.64□□□□□ -0.07
PDE4D-223ENST00000515011 MRPL55Q7Z7F7 128 aaKnown RBP14.64□□□□□ -0.07
PDE4D-223ENST00000515011 KRTAP4-16G5E9R7 235 aaPredicted RBP14.64□□□□□ -0.07
PDE4D-223ENST00000515011 Q6ZQT0 140 aa14.64□□□□□ -0.07
PDE4D-223ENST00000515011 PLECQ15149 4684 aaKnown RBP14.63□□□□□ -0.07
PDE4D-223ENST00000515011 DNAH10Q8IVF4 4471 aa14.63□□□□□ -0.07
PDE4D-223ENST00000515011 C16orf90A8MZG2 172 aa14.63□□□□□ -0.07
PDE4D-223ENST00000515011 FBN3Q75N90 2809 aa14.62□□□□□ -0.07
PDE4D-223ENST00000515011 A0A096LNI7 61 aa14.61□□□□□ -0.07
PDE4D-223ENST00000515011 NDUFV3P56181 108 aaKnown RBP14.6□□□□□ -0.07
PDE4D-223ENST00000515011 Q6ZRX8 168 aa14.6□□□□□ -0.07
PDE4D-223ENST00000515011 B5MCH6 92 aa14.6□□□□□ -0.07
PDE4D-223ENST00000515011 DSCR8Q96T75 97 aa14.6□□□□□ -0.07
PDE4D-223ENST00000515011 PDE6GP18545 87 aa14.59□□□□□ -0.07
PDE4D-223ENST00000515011 Q6JHZ5 121 aa14.59□□□□□ -0.07
PDE4D-223ENST00000515011 LRCOL1A6NCL2 159 aa14.58□□□□□ -0.07
PDE4D-223ENST00000515011 DHRS4-AS1Q9P1J3 65 aa14.58□□□□□ -0.07
PDE4D-223ENST00000515011 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.58□□□□□ -0.08
PDE4D-223ENST00000515011 ETDCA0A1B0GVM5 59 aa14.57□□□□□ -0.08
PDE4D-223ENST00000515011 Q6ZRN7 208 aaPredicted RBP14.57□□□□□ -0.08
PDE4D-223ENST00000515011 ANAPC13Q9BS18 74 aa14.57□□□□□ -0.08
PDE4D-223ENST00000515011 DNAH7Q8WXX0 4024 aa14.57□□□□□ -0.08
PDE4D-223ENST00000515011 TRBV7-4A0A0J9YYF1 115 aa14.56□□□□□ -0.08
PDE4D-223ENST00000515011 IGKV2-24A0A0C4DH68 120 aa14.54□□□□□ -0.08
PDE4D-223ENST00000515011 Q9BRP9 147 aa14.54□□□□□ -0.08
PDE4D-223ENST00000515011 STARD9Q9P2P6 4700 aa14.52□□□□□ -0.08
PDE4D-223ENST00000515011 A0A1W2PNN7 141 aa14.51□□□□□ -0.09
PDE4D-223ENST00000515011 TGP01266 2768 aa14.51□□□□□ -0.09
PDE4D-223ENST00000515011 REG3GQ6UW15 175 aa14.51□□□□□ -0.09
PDE4D-223ENST00000515011 C9orf163Q8N9P6 203 aa14.51□□□□□ -0.09
PDE4D-223ENST00000515011 M0R2N4 97 aa14.5□□□□□ -0.09
PDE4D-223ENST00000515011 IGKV3D-7A0A0C4DH55 119 aa14.5□□□□□ -0.09
PDE4D-223ENST00000515011 VPS13DQ5THJ4 4388 aa14.49□□□□□ -0.09
PDE4D-223ENST00000515011 LINC01547P58512 204 aaPredicted RBP14.49□□□□□ -0.09
PDE4D-223ENST00000515011 Q8N377 158 aa14.49□□□□□ -0.09
PDE4D-223ENST00000515011 PKIGQ9Y2B9 76 aa14.49□□□□□ -0.09
PDE4D-223ENST00000515011 UBL5Q9BZL1 73 aa14.49□□□□□ -0.09
PDE4D-223ENST00000515011 FAM236AA0A1B0GUQ0 79 aa14.48□□□□□ -0.09
PDE4D-223ENST00000515011 FAM236BA0A1B0GV22 79 aa14.48□□□□□ -0.09
PDE4D-223ENST00000515011 ATP5EP2Q5VTU8 51 aa14.47□□□□□ -0.09
PDE4D-223ENST00000515011 TENM2Q9NT68 2774 aa14.47□□□□□ -0.09
PDE4D-223ENST00000515011 DEFB105AQ8NG35 78 aa14.46□□□□□ -0.09
PDE4D-223ENST00000515011 CHTF8P0CG12 524 aa14.44□□□□□ -0.1
PDE4D-223ENST00000515011 IGLV5-48A0A075B6I7 105 aa14.44□□□□□ -0.1
PDE4D-223ENST00000515011 UBE2BP63146 152 aa14.43□□□□□ -0.1
PDE4D-223ENST00000515011 ERC2-IT1O76042 136 aa14.41□□□□□ -0.1
PDE4D-223ENST00000515011 ST20-AS1Q8NBB2 130 aa14.41□□□□□ -0.1
PDE4D-223ENST00000515011 HIST1H4AP62805 103 aaKnown RBP14.39□□□□□ -0.11
PDE4D-223ENST00000515011 Q6ZR54 194 aa14.39□□□□□ -0.11
PDE4D-223ENST00000515011 Q6ZVQ6 151 aa14.39□□□□□ -0.11
PDE4D-223ENST00000515011 LINC00474Q9P2X8 69 aa14.39□□□□□ -0.11
PDE4D-223ENST00000515011 PHF5AQ7RTV0 110 aaKnown RBP14.37□□□□□ -0.11
PDE4D-223ENST00000515011 A0A087WTM6 91 aa14.36□□□□□ -0.11
PDE4D-223ENST00000515011 FAM19A1Q7Z5A9 133 aa14.36□□□□□ -0.11
PDE4D-223ENST00000515011 TNP2Q05952 138 aa14.35□□□□□ -0.11
PDE4D-223ENST00000515011 C3orf22Q8N5N4 141 aa14.35□□□□□ -0.11
PDE4D-223ENST00000515011 A0A087WVE0 104 aa14.33□□□□□ -0.12
PDE4D-223ENST00000515011 PRLHP81277 87 aa14.33□□□□□ -0.12
PDE4D-223ENST00000515011 KRTAP11-1Q8IUC1 163 aa14.33□□□□□ -0.12
PDE4D-223ENST00000515011 PANO1I0J062 215 aa14.31□□□□□ -0.12
PDE4D-223ENST00000515011 CCDC179H3BU77 68 aa14.28□□□□□ -0.12
PDE4D-223ENST00000515011 HAMPP81172 84 aa14.28□□□□□ -0.12
PDE4D-223ENST00000515011 SPACA4Q8TDM5 124 aa14.28□□□□□ -0.12
PDE4D-223ENST00000515011 H0Y9J4 135 aa14.27□□□□□ -0.12
PDE4D-223ENST00000515011 ATOX1O00244 68 aa14.27□□□□□ -0.12
PDE4D-223ENST00000515011 CXCL6P80162 114 aa14.27□□□□□ -0.12
PDE4D-223ENST00000515011 SMIM29Q86T20 159 aa14.26□□□□□ -0.13
PDE4D-223ENST00000515011 EPM2AB3EWF7 344 aa14.25□□□□□ -0.13
PDE4D-223ENST00000515011 C1orf137Q5JT78 98 aa14.25□□□□□ -0.13
PDE4D-223ENST00000515011 HIGD2AQ9BW72 106 aa14.25□□□□□ -0.13
PDE4D-223ENST00000515011 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.24□□□□□ -0.13
PDE4D-223ENST00000515011 A0A1B0GW54 56 aa14.23□□□□□ -0.13
PDE4D-223ENST00000515011 RTL8CO15255 209 aa14.23□□□□□ -0.13
PDE4D-223ENST00000515011 FUSP35637 526 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDE4D-223ENST00000515011 A0A1W2PNM2 257 aa14.22□□□□□ -0.13
PDE4D-223ENST00000515011 C1orf134Q5TEV5 83 aa14.22□□□□□ -0.13
PDE4D-223ENST00000515011 DPH3Q96FX2 82 aa14.2□□□□□ -0.14
PDE4D-223ENST00000515011 Q8NBF4 154 aa14.2□□□□□ -0.14
PDE4D-223ENST00000515011 C3orf84H3BNL1 204 aa14.19□□□□□ -0.14
PDE4D-223ENST00000515011 F8WEM9 126 aa14.19□□□□□ -0.14
PDE4D-223ENST00000515011 BCE1O60756 84 aa14.18□□□□□ -0.14
PDE4D-223ENST00000515011 LY6G6CO95867 125 aa14.18□□□□□ -0.14
PDE4D-223ENST00000515011 KMT2AQ03164 3969 aa14.18□□□□□ -0.14
PDE4D-223ENST00000515011 UBE2AP49459 152 aa14.17□□□□□ -0.14
PDE4D-223ENST00000515011 NREPQ16612 68 aa14.17□□□□□ -0.14
PDE4D-223ENST00000515011 DNAH2Q9P225 4427 aa14.17□□□□□ -0.14
PDE4D-223ENST00000515011 LINC00476Q8WZB0 136 aa14.16□□□□□ -0.14
PDE4D-223ENST00000515011 SPRR4Q96PI1 79 aa14.16□□□□□ -0.14
PDE4D-223ENST00000515011 SCXQ7RTU7 201 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms