RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ESRGQ1W209 222 aa6.47□□□□□ -1.37
VCAN-210ENST00000513960 NKAPP1Q8N9T2 125 aa6.47□□□□□ -1.37
VCAN-210ENST00000513960 Q8NAQ8 132 aa6.47□□□□□ -1.37
VCAN-210ENST00000513960 ATRQ13535 2644 aa6.47□□□□□ -1.37
VCAN-210ENST00000513960 BCE1O60756 84 aa6.46□□□□□ -1.37
VCAN-210ENST00000513960 TRBV7-4A0A0J9YYF1 115 aa6.46□□□□□ -1.38
VCAN-210ENST00000513960 IGHV4-30-4P0DP06 118 aa6.46□□□□□ -1.38
VCAN-210ENST00000513960 C6orf48Q9UBA6 75 aa6.46□□□□□ -1.38
VCAN-210ENST00000513960 KMT2BQ9UMN6 2715 aaPredicted RBP6.46□□□□□ -1.38
VCAN-210ENST00000513960 IGLV6-57P01721 117 aa6.46□□□□□ -1.38
VCAN-210ENST00000513960 SMIM29Q86T20 159 aa6.46□□□□□ -1.38
VCAN-210ENST00000513960 VWFP04275 2813 aa6.45□□□□□ -1.38
VCAN-210ENST00000513960 LELP1Q5T871 98 aa6.45□□□□□ -1.38
VCAN-210ENST00000513960 NSD1Q96L73 2696 aaPredicted RBP6.44□□□□□ -1.38
VCAN-210ENST00000513960 H3BQ85 93 aa6.44□□□□□ -1.38
VCAN-210ENST00000513960 IGKV2D-24A0A075B6R9 120 aa6.44□□□□□ -1.38
VCAN-210ENST00000513960 RPL37AP8A6NKH3 93 aa6.42□□□□□ -1.38
VCAN-210ENST00000513960 IGKV4-1P06312 121 aa6.42□□□□□ -1.38
VCAN-210ENST00000513960 M0R378 163 aa6.42□□□□□ -1.38
VCAN-210ENST00000513960 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
VCAN-210ENST00000513960 TEP1Q99973 2627 aaKnown RBP6.41□□□□□ -1.38
VCAN-210ENST00000513960 DEFB116Q30KQ4 102 aa6.41□□□□□ -1.38
VCAN-210ENST00000513960 Q6ZRU5 148 aa6.41□□□□□ -1.38
VCAN-210ENST00000513960 OTOGQ6ZRI0 2925 aa6.4□□□□□ -1.38
VCAN-210ENST00000513960 TENM1Q9UKZ4 2725 aa6.4□□□□□ -1.38
VCAN-210ENST00000513960 WFDC13Q8IUB5 93 aa6.4□□□□□ -1.38
VCAN-210ENST00000513960 A0A0J9YWU9 116 aa6.4□□□□□ -1.39
VCAN-210ENST00000513960 UBE2BP63146 152 aa6.4□□□□□ -1.39
VCAN-210ENST00000513960 ETDCA0A1B0GVM5 59 aa6.39□□□□□ -1.39
VCAN-210ENST00000513960 OXLD1Q5BKU9 147 aa6.39□□□□□ -1.39
VCAN-210ENST00000513960 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
VCAN-210ENST00000513960 WFDC10BQ8IUB3 73 aa6.38□□□□□ -1.39
VCAN-210ENST00000513960 PRR34Q9NV39 138 aa6.38□□□□□ -1.39
VCAN-210ENST00000513960 KPRPQ5T749 579 aaPredicted RBP6.38□□□□□ -1.39
VCAN-210ENST00000513960 EPM2AB3EWF7 344 aa6.37□□□□□ -1.39
VCAN-210ENST00000513960 VPREB1P12018 145 aa6.37□□□□□ -1.39
VCAN-210ENST00000513960 C1orf137Q5JT78 98 aa6.37□□□□□ -1.39
VCAN-210ENST00000513960 OCR1Q9BZK8 76 aa6.37□□□□□ -1.39
VCAN-210ENST00000513960 CHKB-CPT1BH3BT56 60 aa6.36□□□□□ -1.39
VCAN-210ENST00000513960 LINC00528Q8N1L1 170 aa6.35□□□□□ -1.39
VCAN-210ENST00000513960 A0A0G2JQZ4 141 aa6.35□□□□□ -1.39
VCAN-210ENST00000513960 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
VCAN-210ENST00000513960 C1orf64Q8NEQ6 169 aa6.35□□□□□ -1.39
VCAN-210ENST00000513960 A6NED7 52 aa6.35□□□□□ -1.39
VCAN-210ENST00000513960 Q6ZTC4 211 aa6.35□□□□□ -1.39
VCAN-210ENST00000513960 EGFEM1PQ0D2K5 195 aa6.34□□□□□ -1.39
VCAN-210ENST00000513960 ST20-AS1Q8NBB2 130 aa6.34□□□□□ -1.39
VCAN-210ENST00000513960 F8WDY8 70 aa6.34□□□□□ -1.39
VCAN-210ENST00000513960 H3BNG1 76 aa6.34□□□□□ -1.39
VCAN-210ENST00000513960 SYCNQ0VAF6 134 aa6.34□□□□□ -1.39
VCAN-210ENST00000513960 GVQW2A0A096LPI5 108 aaPredicted RBP6.33□□□□□ -1.4
VCAN-210ENST00000513960 ERC2-IT1O76042 136 aa6.33□□□□□ -1.4
VCAN-210ENST00000513960 MP68P56378 58 aa6.33□□□□□ -1.4
VCAN-210ENST00000513960 Q6ZRP5 223 aa6.33□□□□□ -1.4
VCAN-210ENST00000513960 K7EQZ3 153 aa6.33□□□□□ -1.4
VCAN-210ENST00000513960 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
VCAN-210ENST00000513960 C7orf33Q8WU49 177 aa6.32□□□□□ -1.4
VCAN-210ENST00000513960 LINC00208Q96KT6 92 aa6.32□□□□□ -1.4
VCAN-210ENST00000513960 Q8N377 158 aa6.32□□□□□ -1.4
VCAN-210ENST00000513960 A8MUN3 132 aa6.32□□□□□ -1.4
VCAN-210ENST00000513960 TRRAPQ9Y4A5 3859 aa6.31□□□□□ -1.4
VCAN-210ENST00000513960 SERTAD4-AS1Q5TG53 156 aa6.31□□□□□ -1.4
VCAN-210ENST00000513960 DEFB131BA0A096LNP1 70 aa6.3□□□□□ -1.4
VCAN-210ENST00000513960 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
VCAN-210ENST00000513960 C11orf45Q8TAV5 145 aa6.3□□□□□ -1.4
VCAN-210ENST00000513960 A0A096LNI7 61 aa6.3□□□□□ -1.4
VCAN-210ENST00000513960 A0A1W2PNM2 257 aa6.29□□□□□ -1.4
VCAN-210ENST00000513960 TRAV22A0A0B4J277 110 aa6.29□□□□□ -1.4
VCAN-210ENST00000513960 FAM168BA1KXE4 195 aa6.29□□□□□ -1.4
VCAN-210ENST00000513960 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.28□□□□□ -1.4
VCAN-210ENST00000513960 HCG22E2RYF7 251 aa6.28□□□□□ -1.4
VCAN-210ENST00000513960 KRTAP24-1Q3LI83 254 aa6.28□□□□□ -1.4
VCAN-210ENST00000513960 PSCAO43653 123 aa6.27□□□□□ -1.41
VCAN-210ENST00000513960 PRR15LQ9BU68 103 aa6.27□□□□□ -1.41
VCAN-210ENST00000513960 DHRS4-AS1Q9P1J3 65 aa6.27□□□□□ -1.41
VCAN-210ENST00000513960 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
VCAN-210ENST00000513960 A0A087WSZ3 146 aa6.27□□□□□ -1.41
VCAN-210ENST00000513960 Q8NBF4 154 aa6.27□□□□□ -1.41
VCAN-210ENST00000513960 FLNBO75369 2602 aaKnown RBP6.26□□□□□ -1.41
VCAN-210ENST00000513960 BAHCC1Q9P281 2608 aa6.26□□□□□ -1.41
VCAN-210ENST00000513960 IGKV2-24A0A0C4DH68 120 aa6.26□□□□□ -1.41
VCAN-210ENST00000513960 C15orf56Q8N910 161 aa6.26□□□□□ -1.41
VCAN-210ENST00000513960 LINC01556Q5JQF7 62 aa6.26□□□□□ -1.41
VCAN-210ENST00000513960 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
VCAN-210ENST00000513960 STAB1Q9NY15 2570 aa6.24□□□□□ -1.41
VCAN-210ENST00000513960 Q6ZRX8 168 aa6.24□□□□□ -1.41
VCAN-210ENST00000513960 DSCR10P59022 87 aa6.24□□□□□ -1.41
VCAN-210ENST00000513960 B9D2Q9BPU9 175 aa6.24□□□□□ -1.41
VCAN-210ENST00000513960 H0Y9J4 135 aa6.23□□□□□ -1.41
VCAN-210ENST00000513960 NDUFB1O75438 58 aa6.23□□□□□ -1.41
VCAN-210ENST00000513960 PRLHP81277 87 aa6.23□□□□□ -1.41
VCAN-210ENST00000513960 A8MU10 97 aa6.22□□□□□ -1.41
VCAN-210ENST00000513960 H0Y9P7 68 aa6.22□□□□□ -1.41
VCAN-210ENST00000513960 LINC00476Q8WZB0 136 aa6.22□□□□□ -1.41
VCAN-210ENST00000513960 Q9BRP9 147 aa6.22□□□□□ -1.41
VCAN-210ENST00000513960 MAST4O15021 2626 aa6.22□□□□□ -1.41
VCAN-210ENST00000513960 KCNQ1DNQ9H478 68 aa6.22□□□□□ -1.41
VCAN-210ENST00000513960 PRR15Q8IV56 129 aa6.21□□□□□ -1.41
VCAN-210ENST00000513960 IGLV5-48A0A075B6I7 105 aa6.21□□□□□ -1.42
VCAN-210ENST00000513960 NDUFS5O43920 106 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms