RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 HIST1H2BOP23527 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST1H2BBP33778 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST1H2BDP58876 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST1H2BCP62807 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 MOBPQ13875 183 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST2H2BEQ16778 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST1H2BHQ93079 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST1H2BNQ99877 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 HIST1H2BMQ99879 126 aa5.32□□□□□ -1.56
TCOF1-212ENST00000513538 TRBV10-3A0A0K0K1G6 114 aa5.31□□□□□ -1.56
TCOF1-212ENST00000513538 NCR3O14931 201 aa5.31□□□□□ -1.56
TCOF1-212ENST00000513538 ERC2-IT1O76042 136 aa5.31□□□□□ -1.56
TCOF1-212ENST00000513538 NMUP48645 174 aa5.31□□□□□ -1.56
TCOF1-212ENST00000513538 HERVK_113P61574 105 aa5.31□□□□□ -1.56
TCOF1-212ENST00000513538 RPS29P62273 56 aaKnown RBP5.31□□□□□ -1.56
TCOF1-212ENST00000513538 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
TCOF1-212ENST00000513538 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
TCOF1-212ENST00000513538 TRBV10-2A0A0K0K1G8 114 aa5.3□□□□□ -1.56
TCOF1-212ENST00000513538 E9PLD3 99 aa5.3□□□□□ -1.56
TCOF1-212ENST00000513538 IGLV9-49A0A0B4J1Y8 123 aa5.29□□□□□ -1.56
TCOF1-212ENST00000513538 A0A0J9YXY3 114 aa5.29□□□□□ -1.56
TCOF1-212ENST00000513538 SYS1-DBNDD2H3BUS1 97 aa5.29□□□□□ -1.56
TCOF1-212ENST00000513538 NDUFC2O95298 119 aa5.29□□□□□ -1.56
TCOF1-212ENST00000513538 ADAMTSL4-AS1Q5T5F5 129 aa5.29□□□□□ -1.56
TCOF1-212ENST00000513538 SOSTDC1Q6X4U4 206 aa5.29□□□□□ -1.56
TCOF1-212ENST00000513538 ETDCA0A1B0GVM5 59 aa5.28□□□□□ -1.56
TCOF1-212ENST00000513538 B5MCH6 92 aa5.28□□□□□ -1.56
TCOF1-212ENST00000513538 LGALS3P17931 250 aaKnown RBP5.28□□□□□ -1.56
TCOF1-212ENST00000513538 LINC01545Q5VT33 79 aa5.28□□□□□ -1.56
TCOF1-212ENST00000513538 Q9BRP9 147 aa5.28□□□□□ -1.56
TCOF1-212ENST00000513538 MIEN1Q9BRT3 115 aa5.28□□□□□ -1.56
TCOF1-212ENST00000513538 SLC25A20O43772 301 aa5.27□□□□□ -1.57
TCOF1-212ENST00000513538 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
TCOF1-212ENST00000513538 DDTP30046 118 aa5.27□□□□□ -1.57
TCOF1-212ENST00000513538 COA6Q5JTJ3 125 aaKnown RBP5.27□□□□□ -1.57
TCOF1-212ENST00000513538 LITAFQ99732 161 aa5.27□□□□□ -1.57
TCOF1-212ENST00000513538 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
TCOF1-212ENST00000513538 PCOTHQ58A44 107 aa5.26□□□□□ -1.57
TCOF1-212ENST00000513538 PET117Q6UWS5 81 aa5.26□□□□□ -1.57
TCOF1-212ENST00000513538 SSBP3-AS1Q7Z2R9 100 aa5.26□□□□□ -1.57
TCOF1-212ENST00000513538 SPANXB1Q9NS25 103 aaPredicted RBP5.26□□□□□ -1.57
TCOF1-212ENST00000513538 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
TCOF1-212ENST00000513538 Q6ZRX8 168 aa5.25□□□□□ -1.57
TCOF1-212ENST00000513538 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
TCOF1-212ENST00000513538 TMA7Q9Y2S6 64 aaKnown RBP5.25□□□□□ -1.57
TCOF1-212ENST00000513538 CBY1Q9Y3M2 126 aa5.25□□□□□ -1.57
TCOF1-212ENST00000513538 TIMM17BO60830 172 aa5.24□□□□□ -1.57
TCOF1-212ENST00000513538 C3orf79P0CE67 100 aa5.24□□□□□ -1.57
TCOF1-212ENST00000513538 S100A7L2Q5SY68 101 aa5.24□□□□□ -1.57
TCOF1-212ENST00000513538 IGLV8-61A0A075B6I0 122 aa5.23□□□□□ -1.57
TCOF1-212ENST00000513538 CFC1BP0CG36 223 aa5.23□□□□□ -1.57
TCOF1-212ENST00000513538 NPC2P61916 151 aa5.23□□□□□ -1.57
TCOF1-212ENST00000513538 JOSD1Q15040 202 aaPredicted RBP5.23□□□□□ -1.57
TCOF1-212ENST00000513538 LINC00308Q8TCZ7 52 aa5.23□□□□□ -1.57
TCOF1-212ENST00000513538 TRAV23DV6A0A075B6W5 121 aa5.22□□□□□ -1.57
TCOF1-212ENST00000513538 HINT1P49773 126 aaPredicted RBP5.22□□□□□ -1.57
TCOF1-212ENST00000513538 TTTY13Q9BZ97 58 aa5.22□□□□□ -1.57
TCOF1-212ENST00000513538 C9orf92A6NGG3 77 aa5.21□□□□□ -1.58
TCOF1-212ENST00000513538 ZNF73O43830 326 aaPredicted RBP5.21□□□□□ -1.58
TCOF1-212ENST00000513538 C9orf153Q5TBE3 101 aa5.21□□□□□ -1.58
TCOF1-212ENST00000513538 ST20-AS1Q8NBB2 130 aa5.21□□□□□ -1.58
TCOF1-212ENST00000513538 SPANXCQ9NY87 97 aa5.21□□□□□ -1.58
TCOF1-212ENST00000513538 C5orf52A6NGY3 159 aa5.19□□□□□ -1.58
TCOF1-212ENST00000513538 ZNF815PA8K554 130 aa5.19□□□□□ -1.58
TCOF1-212ENST00000513538 SPRR1BP22528 89 aa5.18□□□□□ -1.58
TCOF1-212ENST00000513538 KRTDAPP60985 99 aa5.18□□□□□ -1.58
TCOF1-212ENST00000513538 SPANXDQ9BXN6 97 aa5.18□□□□□ -1.58
TCOF1-212ENST00000513538 AKR1D1P51857 326 aa5.17□□□□□ -1.58
TCOF1-212ENST00000513538 LINC00518Q8N0U6 118 aa5.17□□□□□ -1.58
TCOF1-212ENST00000513538 COPS9Q8WXC6 57 aa5.17□□□□□ -1.58
TCOF1-212ENST00000513538 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
TCOF1-212ENST00000513538 C20orf202A1L168 122 aa5.16□□□□□ -1.58
TCOF1-212ENST00000513538 SLC25A34Q6PIV7 304 aa5.16□□□□□ -1.58
TCOF1-212ENST00000513538 HRCT1Q6UXD1 115 aa5.16□□□□□ -1.58
TCOF1-212ENST00000513538 OR13C6PQ8NH95 151 aa5.16□□□□□ -1.58
TCOF1-212ENST00000513538 ELOF1P60002 83 aaKnown RBP5.15□□□□□ -1.59
TCOF1-212ENST00000513538 C21orf62-AS1Q17RA5 79 aa5.15□□□□□ -1.59
TCOF1-212ENST00000513538 PCP2Q8IVA1 136 aa5.14□□□□□ -1.59
TCOF1-212ENST00000513538 ATOH7Q8N100 152 aa5.14□□□□□ -1.59
TCOF1-212ENST00000513538 LIMD2Q9BT23 127 aa5.14□□□□□ -1.59
TCOF1-212ENST00000513538 DHRS4-AS1Q9P1J3 65 aa5.14□□□□□ -1.59
TCOF1-212ENST00000513538 M0R2T5 61 aa5.13□□□□□ -1.59
TCOF1-212ENST00000513538 IFITM1P13164 125 aa5.13□□□□□ -1.59
TCOF1-212ENST00000513538 C6orf99Q4VX62 202 aa5.13□□□□□ -1.59
TCOF1-212ENST00000513538 SCGB1D4Q6XE38 83 aa5.13□□□□□ -1.59
TCOF1-212ENST00000513538 Q6ZVH6 145 aa5.13□□□□□ -1.59
TCOF1-212ENST00000513538 HIST3H2BBQ8N257 126 aa5.13□□□□□ -1.59
TCOF1-212ENST00000513538 TRBV7-6A0A0J9YX20 115 aa5.12□□□□□ -1.59
TCOF1-212ENST00000513538 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
TCOF1-212ENST00000513538 COX7BP24311 80 aa5.12□□□□□ -1.59
TCOF1-212ENST00000513538 SNRPEP62304 92 aaKnown RBP5.12□□□□□ -1.59
TCOF1-212ENST00000513538 MUSTN1Q8IVN3 82 aa5.12□□□□□ -1.59
TCOF1-212ENST00000513538 HIST1H2BLQ99880 126 aa5.12□□□□□ -1.59
TCOF1-212ENST00000513538 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
TCOF1-212ENST00000513538 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
TCOF1-212ENST00000513538 H7C2G1 150 aa5.1□□□□□ -1.59
TCOF1-212ENST00000513538 SMIM29Q86T20 159 aa5.1□□□□□ -1.59
TCOF1-212ENST00000513538 LAMTOR3Q9UHA4 124 aa5.1□□□□□ -1.59
TCOF1-212ENST00000513538 IGLV5-48A0A075B6I7 105 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms