RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 LINC00846Q9NV44 126 aa10.84□□□□□ -0.67
HMGCL-209ENST00000513148 PKHD1P08F94 4074 aa10.84□□□□□ -0.67
HMGCL-209ENST00000513148 DNAH11Q96DT5 4516 aa10.83□□□□□ -0.68
HMGCL-209ENST00000513148 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.83□□□□□ -0.68
HMGCL-209ENST00000513148 HRCT1Q6UXD1 115 aa10.83□□□□□ -0.68
HMGCL-209ENST00000513148 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
HMGCL-209ENST00000513148 LINC00242Q5T6M2 205 aa10.82□□□□□ -0.68
HMGCL-209ENST00000513148 PRO0628Q9UI54 55 aa10.81□□□□□ -0.68
HMGCL-209ENST00000513148 IGKV3D-7A0A0C4DH55 119 aa10.8□□□□□ -0.68
HMGCL-209ENST00000513148 C16orf90A8MZG2 172 aa10.8□□□□□ -0.68
HMGCL-209ENST00000513148 SERP1Q9Y6X1 66 aa10.8□□□□□ -0.68
HMGCL-209ENST00000513148 CCKP06307 115 aa10.79□□□□□ -0.68
HMGCL-209ENST00000513148 COX6A2Q02221 97 aa10.79□□□□□ -0.68
HMGCL-209ENST00000513148 CD164L2Q6UWJ8 174 aa10.79□□□□□ -0.68
HMGCL-209ENST00000513148 C14orf132Q9NPU4 83 aa10.79□□□□□ -0.68
HMGCL-209ENST00000513148 IGLV5-52A0A0A0MRZ9 124 aa10.78□□□□□ -0.68
HMGCL-209ENST00000513148 C14orf177Q52M58 125 aa10.77□□□□□ -0.68
HMGCL-209ENST00000513148 JMJD7-PLA2G4BH0Y9G9 81 aa10.77□□□□□ -0.69
HMGCL-209ENST00000513148 HIGD2BQ4VC39 106 aa10.76□□□□□ -0.69
HMGCL-209ENST00000513148 C15orf56Q8N910 161 aa10.76□□□□□ -0.69
HMGCL-209ENST00000513148 A0A087WVE0 104 aa10.75□□□□□ -0.69
HMGCL-209ENST00000513148 LINC00337Q8N6G1 96 aa10.75□□□□□ -0.69
HMGCL-209ENST00000513148 SMIM11BQ8TCY0 68 aa10.75□□□□□ -0.69
HMGCL-209ENST00000513148 IGKV2-28A0A075B6P5 120 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 A0A087WYN8 130 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 FAM236DA0A1B0GTK5 79 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 IGKV2D-28P01615 120 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 FAM236CP0DP71 79 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 LINC00167Q96N53 147 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 GHRHP01286 108 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 PFN2P35080 140 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 SND1-IT1Q9HBX3 110 aa10.74□□□□□ -0.69
HMGCL-209ENST00000513148 DNAH5Q8TE73 4624 aa10.73□□□□□ -0.69
HMGCL-209ENST00000513148 IGHV3OR16-9A0A0B4J2B5 98 aa10.72□□□□□ -0.69
HMGCL-209ENST00000513148 C9orf129Q5T035 196 aaKnown RBP10.72□□□□□ -0.69
HMGCL-209ENST00000513148 ORMDL1Q9P0S3 153 aa10.72□□□□□ -0.69
HMGCL-209ENST00000513148 F8WDY8 70 aa10.72□□□□□ -0.69
HMGCL-209ENST00000513148 A0A0U1RRA0 63 aa10.71□□□□□ -0.69
HMGCL-209ENST00000513148 TRAV7A0A075B6U4 112 aa10.7□□□□□ -0.7
HMGCL-209ENST00000513148 GVQW2A0A096LPI5 108 aaPredicted RBP10.7□□□□□ -0.7
HMGCL-209ENST00000513148 KLKP1Q107X0 134 aa10.69□□□□□ -0.7
HMGCL-209ENST00000513148 BIRC6Q9NR09 4857 aa10.69□□□□□ -0.7
HMGCL-209ENST00000513148 SMIM26A0A096LP01 95 aa10.68□□□□□ -0.7
HMGCL-209ENST00000513148 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
HMGCL-209ENST00000513148 H7BZZ5 65 aa10.68□□□□□ -0.7
HMGCL-209ENST00000513148 ZNF561-AS1K7EIQ3 104 aa10.68□□□□□ -0.7
HMGCL-209ENST00000513148 SLPIP03973 132 aa10.68□□□□□ -0.7
HMGCL-209ENST00000513148 MIR7-3HGQ8N6C7 128 aa10.68□□□□□ -0.7
HMGCL-209ENST00000513148 DYNC1H1Q14204 4646 aaKnown RBP10.68□□□□□ -0.7
HMGCL-209ENST00000513148 A0A087WZ39 114 aa10.67□□□□□ -0.7
HMGCL-209ENST00000513148 TMEM256-PLSCR3K7ERE1 68 aa10.67□□□□□ -0.7
HMGCL-209ENST00000513148 NCR3O14931 201 aa10.67□□□□□ -0.7
HMGCL-209ENST00000513148 SPAG11BQ08648 103 aa10.66□□□□□ -0.7
HMGCL-209ENST00000513148 COX7B2Q8TF08 81 aa10.66□□□□□ -0.7
HMGCL-209ENST00000513148 UBL5Q9BZL1 73 aa10.66□□□□□ -0.7
HMGCL-209ENST00000513148 NDUFC1O43677 76 aa10.65□□□□□ -0.7
HMGCL-209ENST00000513148 ATP5EP56381 51 aaPredicted RBP10.65□□□□□ -0.7
HMGCL-209ENST00000513148 CNBPP62633 177 aaKnown RBP10.65□□□□□ -0.7
HMGCL-209ENST00000513148 LRP1BQ9NZR2 4599 aa10.65□□□□□ -0.7
HMGCL-209ENST00000513148 C20orf197Q8N268 126 aa10.65□□□□□ -0.71
HMGCL-209ENST00000513148 C9orf163Q8N9P6 203 aa10.63□□□□□ -0.71
HMGCL-209ENST00000513148 TRAV23DV6A0A075B6W5 121 aa10.62□□□□□ -0.71
HMGCL-209ENST00000513148 CAMK2N2Q96S95 79 aa10.62□□□□□ -0.71
HMGCL-209ENST00000513148 TOMM7Q9P0U1 55 aa10.62□□□□□ -0.71
HMGCL-209ENST00000513148 HAMPP81172 84 aa10.61□□□□□ -0.71
HMGCL-209ENST00000513148 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
HMGCL-209ENST00000513148 LINC00158P58513 81 aa10.6□□□□□ -0.71
HMGCL-209ENST00000513148 Q6ZRU5 148 aa10.6□□□□□ -0.71
HMGCL-209ENST00000513148 FAM30AQ9NZY2 134 aa10.6□□□□□ -0.71
HMGCL-209ENST00000513148 KIAA1109Q2LD37 5005 aa10.6□□□□□ -0.71
HMGCL-209ENST00000513148 FAM19A1Q7Z5A9 133 aa10.6□□□□□ -0.71
HMGCL-209ENST00000513148 KIAA0087Q14695 138 aa10.58□□□□□ -0.72
HMGCL-209ENST00000513148 LOC110117498A0A087WWA1 95 aa10.57□□□□□ -0.72
HMGCL-209ENST00000513148 H3BQ85 93 aa10.57□□□□□ -0.72
HMGCL-209ENST00000513148 CDK2AP2O75956 126 aa10.56□□□□□ -0.72
HMGCL-209ENST00000513148 C10orf25Q5T742 122 aa10.56□□□□□ -0.72
HMGCL-209ENST00000513148 UNQ6190/PRO20217Q6UXQ8 127 aa10.56□□□□□ -0.72
HMGCL-209ENST00000513148 PDE6GP18545 87 aa10.55□□□□□ -0.72
HMGCL-209ENST00000513148 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
HMGCL-209ENST00000513148 CXCL6P80162 114 aa10.55□□□□□ -0.72
HMGCL-209ENST00000513148 Q6ZSA8 131 aa10.55□□□□□ -0.72
HMGCL-209ENST00000513148 FP248Q71RG6 208 aaPredicted RBP10.55□□□□□ -0.72
HMGCL-209ENST00000513148 Q8IZM0 81 aa10.55□□□□□ -0.72
HMGCL-209ENST00000513148 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
HMGCL-209ENST00000513148 CHTF8P0CG12 524 aa10.54□□□□□ -0.72
HMGCL-209ENST00000513148 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.54□□□□□ -0.72
HMGCL-209ENST00000513148 IGKV2-24A0A0C4DH68 120 aa10.53□□□□□ -0.72
HMGCL-209ENST00000513148 PANO1I0J062 215 aa10.53□□□□□ -0.72
HMGCL-209ENST00000513148 ERC2-IT1O76042 136 aa10.53□□□□□ -0.72
HMGCL-209ENST00000513148 C6orf48Q9UBA6 75 aa10.52□□□□□ -0.73
HMGCL-209ENST00000513148 Q6ZQT0 140 aa10.51□□□□□ -0.73
HMGCL-209ENST00000513148 A0A096LNI7 61 aa10.51□□□□□ -0.73
HMGCL-209ENST00000513148 SCXQ7RTU7 201 aa10.51□□□□□ -0.73
HMGCL-209ENST00000513148 RYR1P21817 5038 aa10.5□□□□□ -0.73
HMGCL-209ENST00000513148 LINC01547P58512 204 aaPredicted RBP10.5□□□□□ -0.73
HMGCL-209ENST00000513148 C9orf116Q5BN46 136 aaPredicted RBP10.5□□□□□ -0.73
HMGCL-209ENST00000513148 PKIGQ9Y2B9 76 aa10.5□□□□□ -0.73
HMGCL-209ENST00000513148 V9GYY9 64 aa10.5□□□□□ -0.73
HMGCL-209ENST00000513148 RBM3P98179 157 aaKnown RBP10.49□□□□□ -0.73
HMGCL-209ENST00000513148 TRBV7-6A0A0J9YX20 115 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms