RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
NEDD9-213ENST00000512665 TOMM7Q9P0U1 55 aa5.23□□□□□ -1.57
NEDD9-213ENST00000512665 H0Y8G0 127 aa5.22□□□□□ -1.57
NEDD9-213ENST00000512665 S100A2P29034 98 aa5.22□□□□□ -1.57
NEDD9-213ENST00000512665 PMCHL2Q9BQD1 86 aa5.22□□□□□ -1.57
NEDD9-213ENST00000512665 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.58
NEDD9-213ENST00000512665 E9PLD3 99 aa5.21□□□□□ -1.58
NEDD9-213ENST00000512665 LEPROTO15243 131 aa5.21□□□□□ -1.58
NEDD9-213ENST00000512665 KRTDAPP60985 99 aa5.21□□□□□ -1.58
NEDD9-213ENST00000512665 HERVK_113P61574 105 aa5.21□□□□□ -1.58
NEDD9-213ENST00000512665 PRLHP81277 87 aa5.21□□□□□ -1.58
NEDD9-213ENST00000512665 COX17Q14061 63 aa5.21□□□□□ -1.58
NEDD9-213ENST00000512665 C20orf202A1L168 122 aa5.2□□□□□ -1.58
NEDD9-213ENST00000512665 NMUP48645 174 aa5.2□□□□□ -1.58
NEDD9-213ENST00000512665 HERV-K104P63124 156 aa5.2□□□□□ -1.58
NEDD9-213ENST00000512665 SPRR4Q96PI1 79 aa5.2□□□□□ -1.58
NEDD9-213ENST00000512665 J3QQQ9 107 aa5.19□□□□□ -1.58
NEDD9-213ENST00000512665 TSPEAR-AS2P59090 65 aa5.19□□□□□ -1.58
NEDD9-213ENST00000512665 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
NEDD9-213ENST00000512665 MYMXA0A1B0GTQ4 84 aa5.18□□□□□ -1.58
NEDD9-213ENST00000512665 GAGE10A6NGK3 116 aa5.18□□□□□ -1.58
NEDD9-213ENST00000512665 LINC00587B1AMM8 73 aa5.18□□□□□ -1.58
NEDD9-213ENST00000512665 ERG28Q9UKR5 140 aa5.18□□□□□ -1.58
NEDD9-213ENST00000512665 MT2AP02795 61 aa5.17□□□□□ -1.58
NEDD9-213ENST00000512665 FAM19A1Q7Z5A9 133 aa5.17□□□□□ -1.58
NEDD9-213ENST00000512665 ZNF706Q9Y5V0 76 aaPredicted RBP5.17□□□□□ -1.58
NEDD9-213ENST00000512665 LOC107984156A0A0G2JMH3 177 aa5.16□□□□□ -1.58
NEDD9-213ENST00000512665 ARL17AQ8IVW1 177 aa5.16□□□□□ -1.58
NEDD9-213ENST00000512665 TMEM126AQ9H061 195 aa5.16□□□□□ -1.58
NEDD9-213ENST00000512665 LGALS3P17931 250 aaKnown RBP5.15□□□□□ -1.59
NEDD9-213ENST00000512665 ANKRD39Q53RE8 183 aa5.15□□□□□ -1.59
NEDD9-213ENST00000512665 SND1-IT1Q9HBX3 110 aa5.15□□□□□ -1.59
NEDD9-213ENST00000512665 IGKV2-28A0A075B6P5 120 aa5.14□□□□□ -1.59
NEDD9-213ENST00000512665 TIMM17BO60830 172 aa5.14□□□□□ -1.59
NEDD9-213ENST00000512665 IGKV2D-28P01615 120 aa5.14□□□□□ -1.59
NEDD9-213ENST00000512665 JOSD1Q15040 202 aaPredicted RBP5.14□□□□□ -1.59
NEDD9-213ENST00000512665 NKAPP1Q8N9T2 125 aa5.14□□□□□ -1.59
NEDD9-213ENST00000512665 A0A0J9YXY3 114 aa5.13□□□□□ -1.59
NEDD9-213ENST00000512665 MT1FP04733 61 aa5.13□□□□□ -1.59
NEDD9-213ENST00000512665 SMIM13P0DJ93 91 aa5.13□□□□□ -1.59
NEDD9-213ENST00000512665 PFN2P35080 140 aa5.13□□□□□ -1.59
NEDD9-213ENST00000512665 ATOH7Q8N100 152 aa5.13□□□□□ -1.59
NEDD9-213ENST00000512665 LITAFQ99732 161 aa5.13□□□□□ -1.59
NEDD9-213ENST00000512665 M0R378 163 aa5.12□□□□□ -1.59
NEDD9-213ENST00000512665 SCGB1D1O95968 90 aa5.12□□□□□ -1.59
NEDD9-213ENST00000512665 LINC00158P58513 81 aa5.12□□□□□ -1.59
NEDD9-213ENST00000512665 SSBP3-AS1Q7Z2R9 100 aa5.12□□□□□ -1.59
NEDD9-213ENST00000512665 MIR7-3HGQ8N6C7 128 aa5.12□□□□□ -1.59
NEDD9-213ENST00000512665 HIGD2AQ9BW72 106 aa5.12□□□□□ -1.59
NEDD9-213ENST00000512665 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
NEDD9-213ENST00000512665 ZNF815PA8K554 130 aa5.11□□□□□ -1.59
NEDD9-213ENST00000512665 TMEM238C9JI98 176 aa5.11□□□□□ -1.59
NEDD9-213ENST00000512665 VPREB1P12018 145 aa5.11□□□□□ -1.59
NEDD9-213ENST00000512665 RPL24P83731 157 aaKnown RBP5.11□□□□□ -1.59
NEDD9-213ENST00000512665 LINC00483Q53H64 154 aa5.11□□□□□ -1.59
NEDD9-213ENST00000512665 MEIG1Q5JSS6 88 aa5.11□□□□□ -1.59
NEDD9-213ENST00000512665 ADAMTSL4-AS1Q5T5F5 129 aa5.11□□□□□ -1.59
NEDD9-213ENST00000512665 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
NEDD9-213ENST00000512665 HSBP1L1C9JCN9 74 aa5.1□□□□□ -1.59
NEDD9-213ENST00000512665 DLEU1O43261 78 aa5.1□□□□□ -1.59
NEDD9-213ENST00000512665 RPL37P61927 97 aaKnown RBP5.1□□□□□ -1.59
NEDD9-213ENST00000512665 Q6ZVH6 145 aa5.1□□□□□ -1.59
NEDD9-213ENST00000512665 PCP2Q8IVA1 136 aa5.1□□□□□ -1.59
NEDD9-213ENST00000512665 Q8NDZ9 215 aa5.1□□□□□ -1.59
NEDD9-213ENST00000512665 NDUFC2O95298 119 aa5.09□□□□□ -1.59
NEDD9-213ENST00000512665 PYY3Q5JQD4 70 aa5.09□□□□□ -1.59
NEDD9-213ENST00000512665 SPANXDQ9BXN6 97 aa5.09□□□□□ -1.59
NEDD9-213ENST00000512665 TTTY13Q9BZ97 58 aa5.09□□□□□ -1.59
NEDD9-213ENST00000512665 SPANXCQ9NY87 97 aa5.09□□□□□ -1.59
NEDD9-213ENST00000512665 A0A0U1RRA0 63 aa5.08□□□□□ -1.6
NEDD9-213ENST00000512665 COX8AP10176 69 aa5.08□□□□□ -1.6
NEDD9-213ENST00000512665 SOSTDC1Q6X4U4 206 aa5.08□□□□□ -1.6
NEDD9-213ENST00000512665 BOD1L2Q8IYS8 172 aa5.08□□□□□ -1.6
NEDD9-213ENST00000512665 TRBV10-2A0A0K0K1G8 114 aa5.07□□□□□ -1.6
NEDD9-213ENST00000512665 EIF4EBP3O60516 100 aaPredicted RBP5.07□□□□□ -1.6
NEDD9-213ENST00000512665 IFITM1P13164 125 aa5.07□□□□□ -1.6
NEDD9-213ENST00000512665 MOBPQ13875 183 aa5.07□□□□□ -1.6
NEDD9-213ENST00000512665 Q6Q795 121 aa5.07□□□□□ -1.6
NEDD9-213ENST00000512665 LINC00308Q8TCZ7 52 aa5.07□□□□□ -1.6
NEDD9-213ENST00000512665 GHRHP01286 108 aa5.06□□□□□ -1.6
NEDD9-213ENST00000512665 IGLV6-57P01721 117 aa5.06□□□□□ -1.6
NEDD9-213ENST00000512665 SCGB1D4Q6XE38 83 aa5.06□□□□□ -1.6
NEDD9-213ENST00000512665 VAMP8Q9BV40 100 aa5.06□□□□□ -1.6
NEDD9-213ENST00000512665 SPANXB1Q9NS25 103 aaPredicted RBP5.06□□□□□ -1.6
NEDD9-213ENST00000512665 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
NEDD9-213ENST00000512665 SPATA45Q537H7 98 aa5.05□□□□□ -1.6
NEDD9-213ENST00000512665 COPS9Q8WXC6 57 aa5.05□□□□□ -1.6
NEDD9-213ENST00000512665 MIEN1Q9BRT3 115 aa5.05□□□□□ -1.6
NEDD9-213ENST00000512665 KMT2DO14686 5537 aa5.05□□□□□ -1.6
NEDD9-213ENST00000512665 KCNQ1DNQ9H478 68 aa5.04□□□□□ -1.6
NEDD9-213ENST00000512665 HIGD1BQ9P298 99 aa5.04□□□□□ -1.6
NEDD9-213ENST00000512665 PAM16Q9Y3D7 125 aa5.04□□□□□ -1.6
NEDD9-213ENST00000512665 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
NEDD9-213ENST00000512665 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
NEDD9-213ENST00000512665 SPRR1AP35321 89 aa5.03□□□□□ -1.6
NEDD9-213ENST00000512665 LINC00518Q8N0U6 118 aa5.03□□□□□ -1.6
NEDD9-213ENST00000512665 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
NEDD9-213ENST00000512665 IGLV9-49A0A0B4J1Y8 123 aa5.02□□□□□ -1.61
NEDD9-213ENST00000512665 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
NEDD9-213ENST00000512665 C14orf144Q96I85 54 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms