RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 RBM3P98179 157 aaKnown RBP10.59□□□□□ -0.71
CXCL3-204ENST00000511669 FAM168BA1KXE4 195 aa10.58□□□□□ -0.72
CXCL3-204ENST00000511669 LRCOL1A6NCL2 159 aa10.58□□□□□ -0.72
CXCL3-204ENST00000511669 MT-ATP8P03928 68 aa10.58□□□□□ -0.72
CXCL3-204ENST00000511669 A0A096LNI7 61 aa10.58□□□□□ -0.72
CXCL3-204ENST00000511669 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
CXCL3-204ENST00000511669 RPL37AP8A6NKH3 93 aa10.57□□□□□ -0.72
CXCL3-204ENST00000511669 CCKP06307 115 aa10.57□□□□□ -0.72
CXCL3-204ENST00000511669 Q6ZRN7 208 aaPredicted RBP10.57□□□□□ -0.72
CXCL3-204ENST00000511669 IGKV2-24A0A0C4DH68 120 aa10.56□□□□□ -0.72
CXCL3-204ENST00000511669 SPRR1AP35321 89 aa10.56□□□□□ -0.72
CXCL3-204ENST00000511669 Q6ZRX8 168 aa10.56□□□□□ -0.72
CXCL3-204ENST00000511669 LINC00643Q86TS7 51 aa10.56□□□□□ -0.72
CXCL3-204ENST00000511669 DSCR8Q96T75 97 aa10.56□□□□□ -0.72
CXCL3-204ENST00000511669 M0R2N4 97 aa10.55□□□□□ -0.72
CXCL3-204ENST00000511669 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
CXCL3-204ENST00000511669 DYNC2H1Q8NCM8 4307 aaKnown RBP10.54□□□□□ -0.72
CXCL3-204ENST00000511669 LOC110117498A0A087WWA1 95 aa10.53□□□□□ -0.72
CXCL3-204ENST00000511669 B5MCH6 92 aa10.53□□□□□ -0.72
CXCL3-204ENST00000511669 Q6Q795 121 aa10.53□□□□□ -0.72
CXCL3-204ENST00000511669 WWC2-AS2Q96NR7 200 aa10.53□□□□□ -0.72
CXCL3-204ENST00000511669 A0A1B0GV72 72 aa10.52□□□□□ -0.73
CXCL3-204ENST00000511669 KRTAP4-16G5E9R7 235 aaPredicted RBP10.51□□□□□ -0.73
CXCL3-204ENST00000511669 NDUFV3P56181 108 aaKnown RBP10.51□□□□□ -0.73
CXCL3-204ENST00000511669 SDIM1Q6ZPB5 146 aa10.51□□□□□ -0.73
CXCL3-204ENST00000511669 Q6ZR54 194 aa10.51□□□□□ -0.73
CXCL3-204ENST00000511669 KRTAP7-1Q8IUC3 87 aa10.51□□□□□ -0.73
CXCL3-204ENST00000511669 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
CXCL3-204ENST00000511669 DNAH1Q9P2D7 4330 aa10.49□□□□□ -0.73
CXCL3-204ENST00000511669 A0A087WTM6 91 aa10.49□□□□□ -0.73
CXCL3-204ENST00000511669 C1orf134Q5TEV5 83 aa10.49□□□□□ -0.73
CXCL3-204ENST00000511669 UBE2BP63146 152 aa10.48□□□□□ -0.73
CXCL3-204ENST00000511669 Q6ZQT0 140 aa10.47□□□□□ -0.73
CXCL3-204ENST00000511669 TRBV7-7A0A0K0K1E9 115 aa10.47□□□□□ -0.73
CXCL3-204ENST00000511669 A0A1W2PNN7 141 aa10.47□□□□□ -0.73
CXCL3-204ENST00000511669 LY6G6CO95867 125 aa10.47□□□□□ -0.73
CXCL3-204ENST00000511669 PRKDCP78527 4128 aaKnown RBP10.46□□□□□ -0.73
CXCL3-204ENST00000511669 UBL5Q9BZL1 73 aa10.46□□□□□ -0.74
CXCL3-204ENST00000511669 DPH3Q96FX2 82 aa10.45□□□□□ -0.74
CXCL3-204ENST00000511669 SMCR5Q8TEV8 140 aa10.44□□□□□ -0.74
CXCL3-204ENST00000511669 ATP5EP2Q5VTU8 51 aa10.44□□□□□ -0.74
CXCL3-204ENST00000511669 FAM19A1Q7Z5A9 133 aa10.44□□□□□ -0.74
CXCL3-204ENST00000511669 Q9BRP9 147 aa10.44□□□□□ -0.74
CXCL3-204ENST00000511669 LINC00846Q9NV44 126 aa10.44□□□□□ -0.74
CXCL3-204ENST00000511669 TRBV7-4A0A0J9YYF1 115 aa10.43□□□□□ -0.74
CXCL3-204ENST00000511669 C3orf84H3BNL1 204 aa10.43□□□□□ -0.74
CXCL3-204ENST00000511669 Q6JHZ5 121 aa10.43□□□□□ -0.74
CXCL3-204ENST00000511669 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
CXCL3-204ENST00000511669 CHTF8P0CG12 524 aa10.42□□□□□ -0.74
CXCL3-204ENST00000511669 LINC00476Q8WZB0 136 aa10.41□□□□□ -0.74
CXCL3-204ENST00000511669 IGLV5-48A0A075B6I7 105 aa10.4□□□□□ -0.74
CXCL3-204ENST00000511669 RTL8CO15255 209 aa10.4□□□□□ -0.74
CXCL3-204ENST00000511669 H0Y9J4 135 aa10.4□□□□□ -0.75
CXCL3-204ENST00000511669 Q8N377 158 aa10.4□□□□□ -0.75
CXCL3-204ENST00000511669 PHF5AQ7RTV0 110 aaKnown RBP10.39□□□□□ -0.75
CXCL3-204ENST00000511669 SPACA4Q8TDM5 124 aa10.39□□□□□ -0.75
CXCL3-204ENST00000511669 CSMD3Q7Z407 3707 aa10.37□□□□□ -0.75
CXCL3-204ENST00000511669 DNAH7Q8WXX0 4024 aa10.37□□□□□ -0.75
CXCL3-204ENST00000511669 F8WEM9 126 aa10.37□□□□□ -0.75
CXCL3-204ENST00000511669 IGLV5-52A0A0A0MRZ9 124 aa10.36□□□□□ -0.75
CXCL3-204ENST00000511669 TGP01266 2768 aa10.36□□□□□ -0.75
CXCL3-204ENST00000511669 A0A1B0GW54 56 aa10.36□□□□□ -0.75
CXCL3-204ENST00000511669 UBE2AP49459 152 aa10.36□□□□□ -0.75
CXCL3-204ENST00000511669 LINC01547P58512 204 aaPredicted RBP10.36□□□□□ -0.75
CXCL3-204ENST00000511669 PLECQ15149 4684 aaKnown RBP10.34□□□□□ -0.75
CXCL3-204ENST00000511669 FUSP35637 526 aaKnown RBP eCLIP10.33□□□□□ -0.76
CXCL3-204ENST00000511669 PRLHP81277 87 aa10.33□□□□□ -0.76
CXCL3-204ENST00000511669 ANAPC13Q9BS18 74 aa10.33□□□□□ -0.76
CXCL3-204ENST00000511669 HIGD2AQ9BW72 106 aa10.33□□□□□ -0.76
CXCL3-204ENST00000511669 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
CXCL3-204ENST00000511669 BCE1O60756 84 aa10.33□□□□□ -0.76
CXCL3-204ENST00000511669 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
CXCL3-204ENST00000511669 ERC2-IT1O76042 136 aa10.32□□□□□ -0.76
CXCL3-204ENST00000511669 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
CXCL3-204ENST00000511669 LYSTQ99698 3801 aa10.31□□□□□ -0.76
CXCL3-204ENST00000511669 IGKV3D-7A0A0C4DH55 119 aa10.3□□□□□ -0.76
CXCL3-204ENST00000511669 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.3□□□□□ -0.76
CXCL3-204ENST00000511669 STARD9Q9P2P6 4700 aa10.3□□□□□ -0.76
CXCL3-204ENST00000511669 VPS13DQ5THJ4 4388 aa10.29□□□□□ -0.76
CXCL3-204ENST00000511669 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
CXCL3-204ENST00000511669 Q6ZVQ6 151 aa10.29□□□□□ -0.76
CXCL3-204ENST00000511669 FAM236AA0A1B0GUQ0 79 aa10.27□□□□□ -0.77
CXCL3-204ENST00000511669 FAM236BA0A1B0GV22 79 aa10.27□□□□□ -0.77
CXCL3-204ENST00000511669 PANO1I0J062 215 aa10.27□□□□□ -0.77
CXCL3-204ENST00000511669 TNP2Q05952 138 aa10.27□□□□□ -0.77
CXCL3-204ENST00000511669 PLAC8Q9NZF1 115 aa10.27□□□□□ -0.77
CXCL3-204ENST00000511669 CXCL6P80162 114 aa10.26□□□□□ -0.77
CXCL3-204ENST00000511669 HAMPP81172 84 aa10.25□□□□□ -0.77
CXCL3-204ENST00000511669 C3orf22Q8N5N4 141 aa10.25□□□□□ -0.77
CXCL3-204ENST00000511669 HIST1H4AP62805 103 aaKnown RBP10.25□□□□□ -0.77
CXCL3-204ENST00000511669 DNAH10Q8IVF4 4471 aa10.24□□□□□ -0.77
CXCL3-204ENST00000511669 SPRR1BP22528 89 aa10.24□□□□□ -0.77
CXCL3-204ENST00000511669 NREPQ16612 68 aa10.24□□□□□ -0.77
CXCL3-204ENST00000511669 KRTAP11-1Q8IUC1 163 aa10.23□□□□□ -0.77
CXCL3-204ENST00000511669 Q8NBF4 154 aa10.23□□□□□ -0.77
CXCL3-204ENST00000511669 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
CXCL3-204ENST00000511669 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
CXCL3-204ENST00000511669 ATOX1O00244 68 aa10.22□□□□□ -0.77
CXCL3-204ENST00000511669 SMIM29Q86T20 159 aa10.22□□□□□ -0.77
CXCL3-204ENST00000511669 KRTAP13-1Q8IUC0 172 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms