RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 EPM2AB3EWF7 344 aa9.66□□□□□ -0.86
SCLT1-209ENST00000511426 SPRR1AP35321 89 aa9.66□□□□□ -0.86
SCLT1-209ENST00000511426 TNP2Q05952 138 aa9.66□□□□□ -0.86
SCLT1-209ENST00000511426 TEN1Q86WV5 123 aa9.65□□□□□ -0.86
SCLT1-209ENST00000511426 SPACA4Q8TDM5 124 aa9.65□□□□□ -0.86
SCLT1-209ENST00000511426 A0A1W2PNN7 141 aa9.64□□□□□ -0.87
SCLT1-209ENST00000511426 hADV29S1A0JD25 119 aa9.64□□□□□ -0.87
SCLT1-209ENST00000511426 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
SCLT1-209ENST00000511426 MTURNQ8N3F0 131 aa9.64□□□□□ -0.87
SCLT1-209ENST00000511426 LINC00528Q8N1L1 170 aa9.63□□□□□ -0.87
SCLT1-209ENST00000511426 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
SCLT1-209ENST00000511426 CHTF8P0CG12 524 aa9.62□□□□□ -0.87
SCLT1-209ENST00000511426 ETDBQ3ZM63 59 aa9.62□□□□□ -0.87
SCLT1-209ENST00000511426 OCIAD2Q56VL3 154 aa9.62□□□□□ -0.87
SCLT1-209ENST00000511426 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
SCLT1-209ENST00000511426 KRTAP4-16G5E9R7 235 aaPredicted RBP9.61□□□□□ -0.87
SCLT1-209ENST00000511426 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
SCLT1-209ENST00000511426 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
SCLT1-209ENST00000511426 REG3GQ6UW15 175 aa9.61□□□□□ -0.87
SCLT1-209ENST00000511426 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.61□□□□□ -0.87
SCLT1-209ENST00000511426 ETDCA0A1B0GVM5 59 aa9.6□□□□□ -0.87
SCLT1-209ENST00000511426 RPL37AP8A6NKH3 93 aa9.6□□□□□ -0.87
SCLT1-209ENST00000511426 J3QR89 54 aa9.6□□□□□ -0.87
SCLT1-209ENST00000511426 Q6ZRX8 168 aa9.6□□□□□ -0.87
SCLT1-209ENST00000511426 DHRS4-AS1Q9P1J3 65 aa9.6□□□□□ -0.87
SCLT1-209ENST00000511426 TMEM256-PLSCR3K7ERE1 68 aa9.59□□□□□ -0.87
SCLT1-209ENST00000511426 K7ERU9 68 aa9.59□□□□□ -0.87
SCLT1-209ENST00000511426 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
SCLT1-209ENST00000511426 DPH3Q96FX2 82 aa9.58□□□□□ -0.88
SCLT1-209ENST00000511426 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
SCLT1-209ENST00000511426 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
SCLT1-209ENST00000511426 B5MCH6 92 aa9.57□□□□□ -0.88
SCLT1-209ENST00000511426 UBE2BP63146 152 aa9.57□□□□□ -0.88
SCLT1-209ENST00000511426 DNAH2Q9P225 4427 aa9.56□□□□□ -0.88
SCLT1-209ENST00000511426 PANO1I0J062 215 aa9.55□□□□□ -0.88
SCLT1-209ENST00000511426 H0Y9J4 135 aa9.55□□□□□ -0.88
SCLT1-209ENST00000511426 PHF5AQ7RTV0 110 aaKnown RBP9.55□□□□□ -0.88
SCLT1-209ENST00000511426 DNAH17Q9UFH2 4485 aa9.54□□□□□ -0.88
SCLT1-209ENST00000511426 Q6ZQY7 126 aa9.54□□□□□ -0.88
SCLT1-209ENST00000511426 JMJD7-PLA2G4BH0Y9G9 81 aa9.52□□□□□ -0.89
SCLT1-209ENST00000511426 KRTAP10-2P60368 255 aa9.52□□□□□ -0.89
SCLT1-209ENST00000511426 Q6ZSA8 131 aa9.51□□□□□ -0.89
SCLT1-209ENST00000511426 OBSCN-AS1Q96MR7 158 aa9.5□□□□□ -0.89
SCLT1-209ENST00000511426 TEX49A0A1B0GTD5 131 aa9.49□□□□□ -0.89
SCLT1-209ENST00000511426 Q9BRP9 147 aa9.49□□□□□ -0.89
SCLT1-209ENST00000511426 BCE1O60756 84 aa9.48□□□□□ -0.89
SCLT1-209ENST00000511426 FAM19A1Q7Z5A9 133 aa9.48□□□□□ -0.89
SCLT1-209ENST00000511426 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
SCLT1-209ENST00000511426 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
SCLT1-209ENST00000511426 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
SCLT1-209ENST00000511426 FAM240AA0A1B0GVK7 77 aa9.44□□□□□ -0.9
SCLT1-209ENST00000511426 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
SCLT1-209ENST00000511426 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
SCLT1-209ENST00000511426 SACSQ9NZJ4 4579 aa9.43□□□□□ -0.9
SCLT1-209ENST00000511426 UBE2AP49459 152 aa9.43□□□□□ -0.9
SCLT1-209ENST00000511426 LAMTOR3Q9UHA4 124 aa9.43□□□□□ -0.9
SCLT1-209ENST00000511426 ACYP1P07311 99 aa9.42□□□□□ -0.9
SCLT1-209ENST00000511426 PDE6GP18545 87 aa9.42□□□□□ -0.9
SCLT1-209ENST00000511426 KRTAP13-1Q8IUC0 172 aa9.42□□□□□ -0.9
SCLT1-209ENST00000511426 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
SCLT1-209ENST00000511426 PRLHP81277 87 aa9.42□□□□□ -0.9
SCLT1-209ENST00000511426 FRAS1Q86XX4 4008 aa9.41□□□□□ -0.9
SCLT1-209ENST00000511426 HYDINQ4G0P3 5121 aa9.41□□□□□ -0.9
SCLT1-209ENST00000511426 RBM3P98179 157 aaKnown RBP9.41□□□□□ -0.9
SCLT1-209ENST00000511426 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
SCLT1-209ENST00000511426 A0A1B0GVY2 172 aa9.4□□□□□ -0.9
SCLT1-209ENST00000511426 NDUFV3P56181 108 aaKnown RBP9.4□□□□□ -0.9
SCLT1-209ENST00000511426 LINC01547P58512 204 aaPredicted RBP9.4□□□□□ -0.9
SCLT1-209ENST00000511426 HIGD2AQ9BW72 106 aa9.4□□□□□ -0.9
SCLT1-209ENST00000511426 Q8N377 158 aa9.39□□□□□ -0.91
SCLT1-209ENST00000511426 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
SCLT1-209ENST00000511426 PSORS1C2Q9UIG4 136 aa9.39□□□□□ -0.91
SCLT1-209ENST00000511426 SCXQ7RTU7 201 aa9.39□□□□□ -0.91
SCLT1-209ENST00000511426 LOC110117498A0A087WWA1 95 aa9.38□□□□□ -0.91
SCLT1-209ENST00000511426 ERC2-IT1O76042 136 aa9.38□□□□□ -0.91
SCLT1-209ENST00000511426 DSCR8Q96T75 97 aa9.38□□□□□ -0.91
SCLT1-209ENST00000511426 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
SCLT1-209ENST00000511426 C14orf132Q9NPU4 83 aa9.37□□□□□ -0.91
SCLT1-209ENST00000511426 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
SCLT1-209ENST00000511426 SPRR1BP22528 89 aa9.36□□□□□ -0.91
SCLT1-209ENST00000511426 DNAH11Q96DT5 4516 aa9.35□□□□□ -0.91
SCLT1-209ENST00000511426 ZNF861PO60384 105 aa9.35□□□□□ -0.91
SCLT1-209ENST00000511426 CCKP06307 115 aa9.35□□□□□ -0.91
SCLT1-209ENST00000511426 C1orf137Q5JT78 98 aa9.35□□□□□ -0.91
SCLT1-209ENST00000511426 ST20-AS1Q8NBB2 130 aa9.35□□□□□ -0.91
SCLT1-209ENST00000511426 DEFB105AQ8NG35 78 aa9.35□□□□□ -0.91
SCLT1-209ENST00000511426 ZNF706Q9Y5V0 76 aaPredicted RBP9.35□□□□□ -0.91
SCLT1-209ENST00000511426 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
SCLT1-209ENST00000511426 VPS25Q9BRG1 176 aa9.32□□□□□ -0.92
SCLT1-209ENST00000511426 F8WEM9 126 aa9.32□□□□□ -0.92
SCLT1-209ENST00000511426 Q6ZQT0 140 aa9.32□□□□□ -0.92
SCLT1-209ENST00000511426 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
SCLT1-209ENST00000511426 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
SCLT1-209ENST00000511426 DNAH5Q8TE73 4624 aa9.31□□□□□ -0.92
SCLT1-209ENST00000511426 A0A1B0GW54 56 aa9.3□□□□□ -0.92
SCLT1-209ENST00000511426 IGLV8-61A0A075B6I0 122 aa9.29□□□□□ -0.92
SCLT1-209ENST00000511426 SMIM29Q86T20 159 aa9.29□□□□□ -0.92
SCLT1-209ENST00000511426 LINC00483Q53H64 154 aa9.28□□□□□ -0.92
SCLT1-209ENST00000511426 PKD1P98161 4303 aa9.28□□□□□ -0.92
SCLT1-209ENST00000511426 SPRR4Q96PI1 79 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms