RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	TMEM136	Q6ZRR5	245 aa		5.18	□□□□□ -1.58
PTCD2-208	ENST00000510676		Q8N8P6	123 aa		5.18	□□□□□ -1.58
PTCD2-208	ENST00000510676	ST20-AS1	Q8NBB2	130 aa		5.18	□□□□□ -1.58
PTCD2-208	ENST00000510676	MPLKIP	Q8TAP9	179 aa		5.18	□□□□□ -1.58
PTCD2-208	ENST00000510676		A0A1B0GXF2	115 aa		5.17	□□□□□ -1.58
PTCD2-208	ENST00000510676	SMIM27	A0A1W2PRY6	76 aa		5.17	□□□□□ -1.58
PTCD2-208	ENST00000510676		H7C2G1	150 aa		5.17	□□□□□ -1.58
PTCD2-208	ENST00000510676	NCR3	O14931	201 aa		5.17	□□□□□ -1.58
PTCD2-208	ENST00000510676	ZNF625	Q96I27	306 aa	Predicted RBP	5.17	□□□□□ -1.58
PTCD2-208	ENST00000510676	LAMTOR2	Q9Y2Q5	125 aa		5.17	□□□□□ -1.58
PTCD2-208	ENST00000510676	FAM236D	A0A1B0GTK5	79 aa		5.16	□□□□□ -1.58
PTCD2-208	ENST00000510676		A6NN06	94 aa		5.16	□□□□□ -1.58
PTCD2-208	ENST00000510676		H3BRM9	83 aa		5.16	□□□□□ -1.58
PTCD2-208	ENST00000510676	FAM236C	P0DP71	79 aa		5.16	□□□□□ -1.58
PTCD2-208	ENST00000510676	S100A12	P80511	92 aa		5.16	□□□□□ -1.58
PTCD2-208	ENST00000510676	SLC25A34	Q6PIV7	304 aa		5.16	□□□□□ -1.58
PTCD2-208	ENST00000510676	SFTA2	Q6UW10	78 aa		5.16	□□□□□ -1.58
PTCD2-208	ENST00000510676	BOD1L2	Q8IYS8	172 aa		5.16	□□□□□ -1.58
PTCD2-208	ENST00000510676	KANTR	A0A1W2PQU2	76 aa		5.15	□□□□□ -1.59
PTCD2-208	ENST00000510676	S100A8	P05109	93 aa		5.15	□□□□□ -1.59
PTCD2-208	ENST00000510676		Q8N9P0	234 aa	Predicted RBP	5.15	□□□□□ -1.59
PTCD2-208	ENST00000510676	TOMM6	Q96B49	74 aa		5.15	□□□□□ -1.59
PTCD2-208	ENST00000510676	MAP1LC3A	Q9H492	121 aa		5.15	□□□□□ -1.59
PTCD2-208	ENST00000510676		A0A0G2JQZ4	141 aa		5.14	□□□□□ -1.59
PTCD2-208	ENST00000510676	HERV-K104	P63124	156 aa		5.14	□□□□□ -1.59
PTCD2-208	ENST00000510676	JOSD1	Q15040	202 aa	Predicted RBP	5.14	□□□□□ -1.59
PTCD2-208	ENST00000510676	OBSCN-AS1	Q96MR7	158 aa		5.14	□□□□□ -1.59
PTCD2-208	ENST00000510676	CST9L	Q9H4G1	147 aa		5.14	□□□□□ -1.59
PTCD2-208	ENST00000510676	G0S2	P27469	103 aa		5.13	□□□□□ -1.59
PTCD2-208	ENST00000510676	LINC00158	P58513	81 aa		5.13	□□□□□ -1.59
PTCD2-208	ENST00000510676	RPL23	P62829	140 aa	Known RBP	5.13	□□□□□ -1.59
PTCD2-208	ENST00000510676	SMIM7	Q9BQ49	75 aa		5.13	□□□□□ -1.59
PTCD2-208	ENST00000510676	PRO1933	Q9H354	126 aa		5.13	□□□□□ -1.59
PTCD2-208	ENST00000510676	MRPL54	Q6P161	138 aa	Known RBP	5.12	□□□□□ -1.59
PTCD2-208	ENST00000510676	ADCYAP1	P18509	176 aa		5.11	□□□□□ -1.59
PTCD2-208	ENST00000510676	PMVK	Q15126	192 aa		5.11	□□□□□ -1.59
PTCD2-208	ENST00000510676	LAMTOR3	Q9UHA4	124 aa		5.11	□□□□□ -1.59
PTCD2-208	ENST00000510676	LOC107984156	A0A0G2JMH3	177 aa		5.1	□□□□□ -1.59
PTCD2-208	ENST00000510676	SMLR1	H3BR10	107 aa		5.1	□□□□□ -1.59
PTCD2-208	ENST00000510676	SPRR2E	P22531	72 aa		5.1	□□□□□ -1.59
PTCD2-208	ENST00000510676	SPRR2B	P35325	72 aa		5.1	□□□□□ -1.59
PTCD2-208	ENST00000510676	SPRR2A	P35326	72 aa		5.1	□□□□□ -1.59
PTCD2-208	ENST00000510676	KRTAP15-1	Q3LI76	137 aa		5.1	□□□□□ -1.59
PTCD2-208	ENST00000510676	ARL17A	Q8IVW1	177 aa		5.1	□□□□□ -1.59
PTCD2-208	ENST00000510676		A8MWP4	228 aa		5.09	□□□□□ -1.59
PTCD2-208	ENST00000510676	DDT	P30046	118 aa		5.09	□□□□□ -1.59
PTCD2-208	ENST00000510676		Q6ZVH6	145 aa		5.09	□□□□□ -1.59
PTCD2-208	ENST00000510676	SCGB3A1	Q96QR1	104 aa		5.09	□□□□□ -1.59
PTCD2-208	ENST00000510676	TRBV10-2	A0A0K0K1G8	114 aa		5.08	□□□□□ -1.6
PTCD2-208	ENST00000510676	IGLC3	P0DOY3	106 aa		5.08	□□□□□ -1.6
PTCD2-208	ENST00000510676	HRES1	P13985	223 aa		5.08	□□□□□ -1.6
PTCD2-208	ENST00000510676	CEBPG	P53567	150 aa		5.08	□□□□□ -1.6
PTCD2-208	ENST00000510676	NXT2	Q9NPJ8	142 aa	Known RBP	5.08	□□□□□ -1.6
PTCD2-208	ENST00000510676	RBM12B-AS1	Q9P1G2	102 aa		5.08	□□□□□ -1.6
PTCD2-208	ENST00000510676	PAM16	Q9Y3D7	125 aa		5.08	□□□□□ -1.6
PTCD2-208	ENST00000510676		A8MUU9	505 aa		5.07	□□□□□ -1.6
PTCD2-208	ENST00000510676	TCL1B	O95988	128 aa		5.07	□□□□□ -1.6
PTCD2-208	ENST00000510676	ZNF22	P17026	224 aa	Predicted RBP	5.07	□□□□□ -1.6
PTCD2-208	ENST00000510676	AKR1D1	P51857	326 aa		5.07	□□□□□ -1.6
PTCD2-208	ENST00000510676	FA2H	Q7L5A8	372 aa		5.07	□□□□□ -1.6
PTCD2-208	ENST00000510676	ATP5L2	Q7Z4Y8	100 aa		5.06	□□□□□ -1.6
PTCD2-208	ENST00000510676	PCP2	Q8IVA1	136 aa		5.06	□□□□□ -1.6
PTCD2-208	ENST00000510676	MIR7-3HG	Q8N6C7	128 aa		5.05	□□□□□ -1.6
PTCD2-208	ENST00000510676	LINC01549	A6NIU2	74 aa		5.04	□□□□□ -1.6
PTCD2-208	ENST00000510676	SMIM13	P0DJ93	91 aa		5.04	□□□□□ -1.6
PTCD2-208	ENST00000510676	BATF3	Q9NR55	127 aa		5.04	□□□□□ -1.6
PTCD2-208	ENST00000510676	KRTAP16-1	A8MUX0	517 aa		5.03	□□□□□ -1.6
PTCD2-208	ENST00000510676	ZNF73	O43830	326 aa	Predicted RBP	5.03	□□□□□ -1.6
PTCD2-208	ENST00000510676	TRAV23DV6	A0A075B6W5	121 aa		5.02	□□□□□ -1.61
PTCD2-208	ENST00000510676	KRTAP10-5	P60370	271 aa		5.02	□□□□□ -1.61
PTCD2-208	ENST00000510676	IGFL1	Q6UW32	110 aa		5.02	□□□□□ -1.61
PTCD2-208	ENST00000510676		Q96NJ1	140 aa		5.02	□□□□□ -1.61
PTCD2-208	ENST00000510676	SEC61G	P60059	68 aa		5	□□□□□ -1.61
PTCD2-208	ENST00000510676	SPRR2F	Q96RM1	72 aa		5	□□□□□ -1.61
PTCD2-208	ENST00000510676	SPANXB1	Q9NS25	103 aa	Predicted RBP	5	□□□□□ -1.61
PTCD2-208	ENST00000510676	DHRS4-AS1	Q9P1J3	65 aa		5	□□□□□ -1.61
PTCD2-208	ENST00000510676	ADIRF	Q15847	76 aa		4.99	□□□□□ -1.61
PTCD2-208	ENST00000510676	LCE1A	Q5T7P2	110 aa		4.99	□□□□□ -1.61
PTCD2-208	ENST00000510676	LINC01546	A6NGU7	62 aa		4.98	□□□□□ -1.61
PTCD2-208	ENST00000510676	MT1B	P07438	61 aa		4.98	□□□□□ -1.61
PTCD2-208	ENST00000510676	SRP19	P09132	144 aa	Known RBP	4.98	□□□□□ -1.61
PTCD2-208	ENST00000510676	NOTCH2NL	Q7Z3S9	236 aa		4.98	□□□□□ -1.61
PTCD2-208	ENST00000510676	URB1-AS1	Q96HZ7	61 aa		4.98	□□□□□ -1.61
PTCD2-208	ENST00000510676	TEX49	A0A1B0GTD5	131 aa		4.97	□□□□□ -1.61
PTCD2-208	ENST00000510676	PCP4L1	A6NKN8	68 aa		4.97	□□□□□ -1.61
PTCD2-208	ENST00000510676	NDUFA6	P56556	154 aa		4.97	□□□□□ -1.61
PTCD2-208	ENST00000510676	S100A7L2	Q5SY68	101 aa		4.97	□□□□□ -1.61
PTCD2-208	ENST00000510676	DST	Q03001	7570 aa	Known RBP	4.97	□□□□□ -1.61
PTCD2-208	ENST00000510676	LINC00587	B1AMM8	73 aa		4.96	□□□□□ -1.62
PTCD2-208	ENST00000510676	MEIG1	Q5JSS6	88 aa		4.96	□□□□□ -1.62
PTCD2-208	ENST00000510676	C11orf86	A6NJI1	115 aa		4.95	□□□□□ -1.62
PTCD2-208	ENST00000510676	NDUFC2	O95298	119 aa		4.95	□□□□□ -1.62
PTCD2-208	ENST00000510676	HINT1	P49773	126 aa	Predicted RBP	4.95	□□□□□ -1.62
PTCD2-208	ENST00000510676	NAT8	Q9UHE5	227 aa		4.95	□□□□□ -1.62
PTCD2-208	ENST00000510676	SPRR2D	P22532	72 aa		4.94	□□□□□ -1.62
PTCD2-208	ENST00000510676	TAL2	Q16559	108 aa		4.94	□□□□□ -1.62
PTCD2-208	ENST00000510676	MTURN	Q8N3F0	131 aa		4.94	□□□□□ -1.62
PTCD2-208	ENST00000510676	TMEM170B	Q5T4T1	132 aa		4.93	□□□□□ -1.62
PTCD2-208	ENST00000510676	SLC51B	Q86UW2	128 aa		4.93	□□□□□ -1.62
PTCD2-208	ENST00000510676	MAP1LC3C	Q9BXW4	147 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms