RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 FP248Q71RG6 208 aaPredicted RBP8.8□□□□□ -1
SNCAIP-209ENST00000508017 TMEM254Q8TBM7 123 aa8.8□□□□□ -1
SNCAIP-209ENST00000508017 TENM3Q9P273 2699 aa8.78□□□□□ -1
SNCAIP-209ENST00000508017 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
SNCAIP-209ENST00000508017 NDUFC1O43677 76 aa8.78□□□□□ -1
SNCAIP-209ENST00000508017 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
SNCAIP-209ENST00000508017 Q6ZTC4 211 aa8.77□□□□□ -1.01
SNCAIP-209ENST00000508017 Q8N377 158 aa8.77□□□□□ -1.01
SNCAIP-209ENST00000508017 HECTD1Q9ULT8 2610 aa8.77□□□□□ -1.01
SNCAIP-209ENST00000508017 INAFM1C9JVW0 142 aa8.76□□□□□ -1.01
SNCAIP-209ENST00000508017 ESRGQ1W209 222 aa8.76□□□□□ -1.01
SNCAIP-209ENST00000508017 OCR1Q9BZK8 76 aa8.76□□□□□ -1.01
SNCAIP-209ENST00000508017 ANK2Q01484 3957 aa8.76□□□□□ -1.01
SNCAIP-209ENST00000508017 IGKV2D-24A0A075B6R9 120 aa8.75□□□□□ -1.01
SNCAIP-209ENST00000508017 SMIM26A0A096LP01 95 aa8.75□□□□□ -1.01
SNCAIP-209ENST00000508017 LINC00336Q6ZUF6 198 aa8.75□□□□□ -1.01
SNCAIP-209ENST00000508017 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
SNCAIP-209ENST00000508017 C1orf43Q9BWL3 253 aa8.75□□□□□ -1.01
SNCAIP-209ENST00000508017 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
SNCAIP-209ENST00000508017 NKAPP1Q8N9T2 125 aa8.74□□□□□ -1.01
SNCAIP-209ENST00000508017 KCNQ1DNQ9H478 68 aa8.74□□□□□ -1.01
SNCAIP-209ENST00000508017 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
SNCAIP-209ENST00000508017 ERC2-IT1O76042 136 aa8.73□□□□□ -1.01
SNCAIP-209ENST00000508017 RPL37AP8A6NKH3 93 aa8.72□□□□□ -1.01
SNCAIP-209ENST00000508017 H3BNG1 76 aa8.72□□□□□ -1.01
SNCAIP-209ENST00000508017 PRYO14603 147 aa8.72□□□□□ -1.01
SNCAIP-209ENST00000508017 FAM229BQ4G0N7 80 aa8.72□□□□□ -1.01
SNCAIP-209ENST00000508017 IGLV5-48A0A075B6I7 105 aa8.71□□□□□ -1.01
SNCAIP-209ENST00000508017 HIGD2AQ9BW72 106 aa8.71□□□□□ -1.01
SNCAIP-209ENST00000508017 ATP5EP56381 51 aaPredicted RBP8.71□□□□□ -1.02
SNCAIP-209ENST00000508017 A0A1W2PNM2 257 aa8.7□□□□□ -1.02
SNCAIP-209ENST00000508017 FAM168BA1KXE4 195 aa8.7□□□□□ -1.02
SNCAIP-209ENST00000508017 Q9BRP9 147 aa8.7□□□□□ -1.02
SNCAIP-209ENST00000508017 ST20-AS1Q8NBB2 130 aa8.7□□□□□ -1.02
SNCAIP-209ENST00000508017 SMIM29Q86T20 159 aa8.69□□□□□ -1.02
SNCAIP-209ENST00000508017 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
SNCAIP-209ENST00000508017 LINC01556Q5JQF7 62 aa8.68□□□□□ -1.02
SNCAIP-209ENST00000508017 OXLD1Q5BKU9 147 aa8.68□□□□□ -1.02
SNCAIP-209ENST00000508017 Q6ZRX8 168 aa8.68□□□□□ -1.02
SNCAIP-209ENST00000508017 KRTAP4-16G5E9R7 235 aaPredicted RBP8.66□□□□□ -1.02
SNCAIP-209ENST00000508017 FUSP35637 526 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNCAIP-209ENST00000508017 KRTAP10-11P60412 298 aa8.66□□□□□ -1.02
SNCAIP-209ENST00000508017 DNAH1Q9P2D7 4330 aa8.66□□□□□ -1.02
SNCAIP-209ENST00000508017 J3QKU1 62 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 C1orf137Q5JT78 98 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 MRAPQ8TCY5 172 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 PRO0628Q9UI54 55 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 BAHCC1Q9P281 2608 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 TNP2Q05952 138 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 CASC10Q5T4H9 136 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 DHRS4-AS1Q9P1J3 65 aa8.65□□□□□ -1.02
SNCAIP-209ENST00000508017 F8WDY8 70 aa8.64□□□□□ -1.03
SNCAIP-209ENST00000508017 MPLKIPQ8TAP9 179 aa8.64□□□□□ -1.03
SNCAIP-209ENST00000508017 CMYA5Q8N3K9 4069 aa8.64□□□□□ -1.03
SNCAIP-209ENST00000508017 IGLV1-50A0A075B6I6 118 aa8.64□□□□□ -1.03
SNCAIP-209ENST00000508017 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
SNCAIP-209ENST00000508017 DEFB131BA0A096LNP1 70 aa8.63□□□□□ -1.03
SNCAIP-209ENST00000508017 FLNBO75369 2602 aaKnown RBP8.63□□□□□ -1.03
SNCAIP-209ENST00000508017 Q8NBF4 154 aa8.63□□□□□ -1.03
SNCAIP-209ENST00000508017 F8P00451 2351 aa8.63□□□□□ -1.03
SNCAIP-209ENST00000508017 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
SNCAIP-209ENST00000508017 SPRR1AP35321 89 aa8.62□□□□□ -1.03
SNCAIP-209ENST00000508017 DSCR10P59022 87 aa8.62□□□□□ -1.03
SNCAIP-209ENST00000508017 PLA2G2DQ9UNK4 145 aa8.61□□□□□ -1.03
SNCAIP-209ENST00000508017 A0A0G2JQZ4 141 aa8.6□□□□□ -1.03
SNCAIP-209ENST00000508017 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
SNCAIP-209ENST00000508017 K7EQZ3 153 aa8.6□□□□□ -1.03
SNCAIP-209ENST00000508017 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
SNCAIP-209ENST00000508017 IGLV5-37A0A075B6J1 123 aa8.59□□□□□ -1.03
SNCAIP-209ENST00000508017 LCE6AA0A183 80 aa8.59□□□□□ -1.03
SNCAIP-209ENST00000508017 C11orf45Q8TAV5 145 aa8.59□□□□□ -1.03
SNCAIP-209ENST00000508017 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
SNCAIP-209ENST00000508017 UBE2BP63146 152 aa8.58□□□□□ -1.04
SNCAIP-209ENST00000508017 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
SNCAIP-209ENST00000508017 A0A1B0GW54 56 aa8.58□□□□□ -1.04
SNCAIP-209ENST00000508017 BRK1Q8WUW1 75 aa8.58□□□□□ -1.04
SNCAIP-209ENST00000508017 MRPL55Q7Z7F7 128 aaKnown RBP8.56□□□□□ -1.04
SNCAIP-209ENST00000508017 MAST4O15021 2626 aa8.55□□□□□ -1.04
SNCAIP-209ENST00000508017 DNAH10Q8IVF4 4471 aa8.55□□□□□ -1.04
SNCAIP-209ENST00000508017 STAB1Q9NY15 2570 aa8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 LRCOL1A6NCL2 159 aa8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 LINC00476Q8WZB0 136 aa8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 DEFB116Q30KQ4 102 aa8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 NOTCH1P46531 2555 aa8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 DNAH3Q8TD57 4116 aa8.54□□□□□ -1.04
SNCAIP-209ENST00000508017 hDV103S1A0JD37 113 aa8.53□□□□□ -1.04
SNCAIP-209ENST00000508017 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.52□□□□□ -1.05
SNCAIP-209ENST00000508017 FBN1P35555 2871 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-209ENST00000508017 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-209ENST00000508017 REG3GQ6UW15 175 aa8.51□□□□□ -1.05
SNCAIP-209ENST00000508017 HCG22E2RYF7 251 aa8.51□□□□□ -1.05
SNCAIP-209ENST00000508017 PSCAO43653 123 aa8.51□□□□□ -1.05
SNCAIP-209ENST00000508017 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
SNCAIP-209ENST00000508017 IGFL1Q6UW32 110 aa8.5□□□□□ -1.05
SNCAIP-209ENST00000508017 PRR4Q16378 134 aa8.5□□□□□ -1.05
SNCAIP-209ENST00000508017 PRLHP81277 87 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms