RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 UBL5Q9BZL1 73 aa9.47□□□□□ -0.89
DDX41-208ENST00000507955 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.89
DDX41-208ENST00000507955 FAM168BA1KXE4 195 aa9.46□□□□□ -0.89
DDX41-208ENST00000507955 MDFIQ99750 246 aa9.45□□□□□ -0.9
DDX41-208ENST00000507955 GHRHP01286 108 aa9.45□□□□□ -0.9
DDX41-208ENST00000507955 M0R378 163 aa9.44□□□□□ -0.9
DDX41-208ENST00000507955 COX7BP24311 80 aa9.44□□□□□ -0.9
DDX41-208ENST00000507955 RPL37AP8A6NKH3 93 aa9.43□□□□□ -0.9
DDX41-208ENST00000507955 ELOF1P60002 83 aaKnown RBP9.43□□□□□ -0.9
DDX41-208ENST00000507955 Q6ZVQ6 151 aa9.42□□□□□ -0.9
DDX41-208ENST00000507955 LINC01547P58512 204 aaPredicted RBP9.41□□□□□ -0.9
DDX41-208ENST00000507955 KRTAP1-5Q9BYS1 174 aa9.41□□□□□ -0.9
DDX41-208ENST00000507955 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
DDX41-208ENST00000507955 C7orf33Q8WU49 177 aa9.4□□□□□ -0.9
DDX41-208ENST00000507955 HAMPP81172 84 aa9.39□□□□□ -0.91
DDX41-208ENST00000507955 NKAPP1Q8N9T2 125 aa9.39□□□□□ -0.91
DDX41-208ENST00000507955 J3KT08 172 aa9.38□□□□□ -0.91
DDX41-208ENST00000507955 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
DDX41-208ENST00000507955 TMEM258P61165 79 aa9.38□□□□□ -0.91
DDX41-208ENST00000507955 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
DDX41-208ENST00000507955 TRBV7-4A0A0J9YYF1 115 aa9.37□□□□□ -0.91
DDX41-208ENST00000507955 OXTP01178 125 aa9.37□□□□□ -0.91
DDX41-208ENST00000507955 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
DDX41-208ENST00000507955 DEFB105AQ8NG35 78 aa9.36□□□□□ -0.91
DDX41-208ENST00000507955 DPH3Q96FX2 82 aa9.36□□□□□ -0.91
DDX41-208ENST00000507955 PLECQ15149 4684 aaKnown RBP9.36□□□□□ -0.91
DDX41-208ENST00000507955 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
DDX41-208ENST00000507955 SCXQ7RTU7 201 aa9.35□□□□□ -0.91
DDX41-208ENST00000507955 SRRM2Q9UQ35 2752 aaKnown RBP9.35□□□□□ -0.91
DDX41-208ENST00000507955 C20orf197Q8N268 126 aa9.35□□□□□ -0.91
DDX41-208ENST00000507955 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
DDX41-208ENST00000507955 TRBV7-6A0A0J9YX20 115 aa9.33□□□□□ -0.92
DDX41-208ENST00000507955 PDE6GP18545 87 aa9.33□□□□□ -0.92
DDX41-208ENST00000507955 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
DDX41-208ENST00000507955 H3BQ85 93 aa9.32□□□□□ -0.92
DDX41-208ENST00000507955 TLX1NBP0CAT3 122 aa9.31□□□□□ -0.92
DDX41-208ENST00000507955 PRKDCP78527 4128 aaKnown RBP9.31□□□□□ -0.92
DDX41-208ENST00000507955 CXCL6P80162 114 aa9.31□□□□□ -0.92
DDX41-208ENST00000507955 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.3□□□□□ -0.92
DDX41-208ENST00000507955 IGKV2-24A0A0C4DH68 120 aa9.3□□□□□ -0.92
DDX41-208ENST00000507955 F8WDY8 70 aa9.3□□□□□ -0.92
DDX41-208ENST00000507955 UBE2DNLQ8IWF7 75 aa9.29□□□□□ -0.92
DDX41-208ENST00000507955 RMI2Q96E14 147 aa9.29□□□□□ -0.92
DDX41-208ENST00000507955 Q9BRP9 147 aa9.29□□□□□ -0.92
DDX41-208ENST00000507955 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
DDX41-208ENST00000507955 TRAV7A0A075B6U4 112 aa9.29□□□□□ -0.92
DDX41-208ENST00000507955 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
DDX41-208ENST00000507955 APLNQ9ULZ1 77 aa9.28□□□□□ -0.92
DDX41-208ENST00000507955 PSCAO43653 123 aa9.27□□□□□ -0.93
DDX41-208ENST00000507955 STARD9Q9P2P6 4700 aa9.27□□□□□ -0.93
DDX41-208ENST00000507955 Q8N377 158 aa9.27□□□□□ -0.93
DDX41-208ENST00000507955 MEGF8Q7Z7M0 2845 aa9.27□□□□□ -0.93
DDX41-208ENST00000507955 A0A096LNI7 61 aa9.26□□□□□ -0.93
DDX41-208ENST00000507955 KRTAP4-16G5E9R7 235 aaPredicted RBP9.26□□□□□ -0.93
DDX41-208ENST00000507955 H7BZZ5 65 aa9.26□□□□□ -0.93
DDX41-208ENST00000507955 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
DDX41-208ENST00000507955 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
DDX41-208ENST00000507955 Q8N9L7 120 aa9.26□□□□□ -0.93
DDX41-208ENST00000507955 Q6ZRX8 168 aa9.25□□□□□ -0.93
DDX41-208ENST00000507955 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
DDX41-208ENST00000507955 BCE1O60756 84 aa9.24□□□□□ -0.93
DDX41-208ENST00000507955 DYNC2H1Q8NCM8 4307 aaKnown RBP9.24□□□□□ -0.93
DDX41-208ENST00000507955 ETDCA0A1B0GVM5 59 aa9.24□□□□□ -0.93
DDX41-208ENST00000507955 PLA2G2DQ9UNK4 145 aa9.24□□□□□ -0.93
DDX41-208ENST00000507955 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
DDX41-208ENST00000507955 CHTF8P0CG12 524 aa9.23□□□□□ -0.93
DDX41-208ENST00000507955 DNHD1Q96M86 4753 aa9.23□□□□□ -0.93
DDX41-208ENST00000507955 C5orf47Q569G3 176 aa9.23□□□□□ -0.93
DDX41-208ENST00000507955 C3orf84H3BNL1 204 aa9.22□□□□□ -0.93
DDX41-208ENST00000507955 B9D2Q9BPU9 175 aa9.21□□□□□ -0.93
DDX41-208ENST00000507955 KLKP1Q107X0 134 aa9.21□□□□□ -0.94
DDX41-208ENST00000507955 IGLV5-37A0A075B6J1 123 aa9.2□□□□□ -0.94
DDX41-208ENST00000507955 UBE2BP63146 152 aa9.2□□□□□ -0.94
DDX41-208ENST00000507955 FAM236DA0A1B0GTK5 79 aa9.2□□□□□ -0.94
DDX41-208ENST00000507955 FAM236CP0DP71 79 aa9.2□□□□□ -0.94
DDX41-208ENST00000507955 SPRR1AP35321 89 aa9.2□□□□□ -0.94
DDX41-208ENST00000507955 A0A0G2JQZ4 141 aa9.19□□□□□ -0.94
DDX41-208ENST00000507955 PRYO14603 147 aa9.19□□□□□ -0.94
DDX41-208ENST00000507955 KMT2AQ03164 3969 aa9.19□□□□□ -0.94
DDX41-208ENST00000507955 BPY2O14599 106 aa9.19□□□□□ -0.94
DDX41-208ENST00000507955 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
DDX41-208ENST00000507955 Q5XG85 94 aa9.19□□□□□ -0.94
DDX41-208ENST00000507955 FUSP35637 526 aaKnown RBP eCLIP9.18□□□□□ -0.94
DDX41-208ENST00000507955 PRLHP81277 87 aa9.18□□□□□ -0.94
DDX41-208ENST00000507955 TGP01266 2768 aa9.18□□□□□ -0.94
DDX41-208ENST00000507955 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
DDX41-208ENST00000507955 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
DDX41-208ENST00000507955 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
DDX41-208ENST00000507955 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
DDX41-208ENST00000507955 F8WEM9 126 aa9.16□□□□□ -0.94
DDX41-208ENST00000507955 NREPQ16612 68 aa9.16□□□□□ -0.94
DDX41-208ENST00000507955 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
DDX41-208ENST00000507955 IGLV5-48A0A075B6I7 105 aa9.15□□□□□ -0.94
DDX41-208ENST00000507955 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.95
DDX41-208ENST00000507955 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
DDX41-208ENST00000507955 A0A1W2PNM2 257 aa9.13□□□□□ -0.95
DDX41-208ENST00000507955 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
DDX41-208ENST00000507955 PANO1I0J062 215 aa9.13□□□□□ -0.95
DDX41-208ENST00000507955 NBDYA0A0U1RRE5 68 aa9.12□□□□□ -0.95
DDX41-208ENST00000507955 HIGD2AQ9BW72 106 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms